RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
ATXN3-250ENST00000568290 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
ATXN3-250ENST00000568290 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
ATXN3-250ENST00000568290 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
ATXN3-250ENST00000568290 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
ATXN3-250ENST00000568290 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 APAF1O14727 1248 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 NBR1Q14596 966 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 RWDD1Q9H446 243 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-250ENST00000568290 ZFYVE9O95405 1425 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 ARHGAP31Q2M1Z3 1444 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 CD109Q6YHK3 1445 aa9.78□□□□□ -0.84
ATXN3-250ENST00000568290 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.84
ATXN3-250ENST00000568290 ABCC11Q96J66 1382 aa9.77□□□□□ -0.84
ATXN3-250ENST00000568290 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.84
ATXN3-250ENST00000568290 POGZQ7Z3K3 1410 aa9.77□□□□□ -0.85
ATXN3-250ENST00000568290 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
ATXN3-250ENST00000568290 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-250ENST00000568290 ZNF428Q96B54 188 aa9.77□□□□□ -0.85
ATXN3-250ENST00000568290 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-250ENST00000568290 TERF2IPQ9NYB0 399 aa9.77□□□□□ -0.85
ATXN3-250ENST00000568290 ABCA6Q8N139 1617 aa9.77□□□□□ -0.85
ATXN3-250ENST00000568290 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
ATXN3-250ENST00000568290 STK25O00506 426 aa9.76□□□□□ -0.85
ATXN3-250ENST00000568290 NKX1-1Q15270 411 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-250ENST00000568290 CLUAP1Q96AJ1 413 aa9.76□□□□□ -0.85
ATXN3-250ENST00000568290 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
ATXN3-250ENST00000568290 HECW2Q9P2P5 1572 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 NOS1P29475 1434 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 NSD3Q9BZ95 1437 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 MYOM1P52179 1685 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 ZC3H13Q5T200 1668 aaKnown RBP9.75□□□□□ -0.85
ATXN3-250ENST00000568290 IPO8O15397 1037 aaKnown RBP9.75□□□□□ -0.85
ATXN3-250ENST00000568290 ATMINO43313 823 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-250ENST00000568290 PLIN1O60240 522 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 POTEIP0CG38 1075 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-250ENST00000568290 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-250ENST00000568290 IL16Q14005 1332 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 ADGRF5Q8IZF2 1346 aa9.75□□□□□ -0.85
ATXN3-250ENST00000568290 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-250ENST00000568290 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
ATXN3-250ENST00000568290 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
ATXN3-250ENST00000568290 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
ATXN3-250ENST00000568290 STK24Q9Y6E0 443 aa9.73□□□□□ -0.85
ATXN3-250ENST00000568290 MED14O60244 1454 aa9.72□□□□□ -0.85
ATXN3-250ENST00000568290 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
ATXN3-250ENST00000568290 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
ATXN3-250ENST00000568290 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-250ENST00000568290 NPATQ14207 1427 aa9.72□□□□□ -0.85
ATXN3-250ENST00000568290 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 GGT6Q6P531 493 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 ILDR1Q86SU0 546 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-250ENST00000568290 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.86
ATXN3-250ENST00000568290 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 DDX19BQ9UMR2 479 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 TRAK1Q9UPV9 953 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 KIF16BQ96L93 1317 aa9.71□□□□□ -0.86
ATXN3-250ENST00000568290 PPLO60437 1756 aa9.7□□□□□ -0.86
ATXN3-250ENST00000568290 PTMSP20962 102 aa9.7□□□□□ -0.86
ATXN3-250ENST00000568290 TCP11L2Q8N4U5 519 aa9.7□□□□□ -0.86
ATXN3-250ENST00000568290 ABCC3O15438 1527 aa9.7□□□□□ -0.86
ATXN3-250ENST00000568290 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
ATXN3-250ENST00000568290 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
ATXN3-250ENST00000568290 CARD14Q9BXL6 1004 aa9.69□□□□□ -0.86
ATXN3-250ENST00000568290 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
ATXN3-250ENST00000568290 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 U2AF1L5P0DN76 240 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-250ENST00000568290 RGS3P49796 1198 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 MTHFSP49914 203 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 U2AF1Q01081 240 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATXN3-250ENST00000568290 C8orf34Q49A92 452 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 POGKQ9P215 609 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
ATXN3-250ENST00000568290 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
ATXN3-250ENST00000568290 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
ATXN3-250ENST00000568290 L1TD1Q5T7N2 865 aaKnown RBP9.67□□□□□ -0.86
ATXN3-250ENST00000568290 C20orf194Q5TEA3 1177 aa9.67□□□□□ -0.86
ATXN3-250ENST00000568290 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
ATXN3-250ENST00000568290 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-250ENST00000568290 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
ATXN3-250ENST00000568290 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
ATXN3-250ENST00000568290 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
ATXN3-250ENST00000568290 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
ATXN3-250ENST00000568290 BCAR3O75815 825 aa9.66□□□□□ -0.86
ATXN3-250ENST00000568290 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
ATXN3-250ENST00000568290 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATXN3-250ENST00000568290 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
ATXN3-250ENST00000568290 GLI2P10070 1586 aa9.66□□□□□ -0.86
ATXN3-250ENST00000568290 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
ATXN3-250ENST00000568290 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
ATXN3-250ENST00000568290 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-250ENST00000568290 FCHSD2O94868 740 aa9.65□□□□□ -0.86
ATXN3-250ENST00000568290 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
ATXN3-250ENST00000568290 FBXO22Q8NEZ5 403 aa9.65□□□□□ -0.86
ATXN3-250ENST00000568290 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms