RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
TSC2-220ENST00000568238 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
TSC2-220ENST00000568238 PHRF1Q9P1Y6 1649 aaKnown RBP18.54■□□□□ 0.56
TSC2-220ENST00000568238 CENPJQ9HC77 1338 aaPredicted RBP18.53■□□□□ 0.56
TSC2-220ENST00000568238 BRWD3Q6RI45 1802 aa18.52■□□□□ 0.56
TSC2-220ENST00000568238 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.56
TSC2-220ENST00000568238 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.56
TSC2-220ENST00000568238 POLR3AO14802 1390 aaPredicted RBP18.52■□□□□ 0.55
TSC2-220ENST00000568238 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
TSC2-220ENST00000568238 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
TSC2-220ENST00000568238 VPS72Q15906 364 aa18.49■□□□□ 0.55
TSC2-220ENST00000568238 FAM83GA6ND36 823 aa18.48■□□□□ 0.55
TSC2-220ENST00000568238 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
TSC2-220ENST00000568238 ACEP12821 1306 aa18.48■□□□□ 0.55
TSC2-220ENST00000568238 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
TSC2-220ENST00000568238 SRPK2P78362 688 aaKnown RBP18.47■□□□□ 0.55
TSC2-220ENST00000568238 PLEKHG3A1L390 1219 aa18.46■□□□□ 0.55
TSC2-220ENST00000568238 CCDC9Q9Y3X0 531 aaKnown RBP18.46■□□□□ 0.55
TSC2-220ENST00000568238 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
TSC2-220ENST00000568238 BTG4Q9NY30 223 aa18.45■□□□□ 0.54
TSC2-220ENST00000568238 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
TSC2-220ENST00000568238 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
TSC2-220ENST00000568238 PRDM11Q9NQV5 511 aa18.43■□□□□ 0.54
TSC2-220ENST00000568238 SRCAPQ6ZRS2 3230 aa18.43■□□□□ 0.54
TSC2-220ENST00000568238 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
TSC2-220ENST00000568238 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
TSC2-220ENST00000568238 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
TSC2-220ENST00000568238 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
TSC2-220ENST00000568238 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
TSC2-220ENST00000568238 ONECUT3O60422 494 aaPredicted RBP18.39■□□□□ 0.53
TSC2-220ENST00000568238 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
TSC2-220ENST00000568238 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
TSC2-220ENST00000568238 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
TSC2-220ENST00000568238 USP6P35125 1406 aa18.39■□□□□ 0.53
TSC2-220ENST00000568238 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
TSC2-220ENST00000568238 A0A0G2JS52 829 aa18.38■□□□□ 0.53
TSC2-220ENST00000568238 MYT1Q01538 1121 aa18.38■□□□□ 0.53
TSC2-220ENST00000568238 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
TSC2-220ENST00000568238 BLMP54132 1417 aaPredicted RBP18.38■□□□□ 0.53
TSC2-220ENST00000568238 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
TSC2-220ENST00000568238 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
TSC2-220ENST00000568238 USP19O94966 1318 aa18.37■□□□□ 0.53
TSC2-220ENST00000568238 LMO7Q8WWI1 1683 aa18.37■□□□□ 0.53
TSC2-220ENST00000568238 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
TSC2-220ENST00000568238 CHRNA2Q15822 529 aa18.36■□□□□ 0.53
TSC2-220ENST00000568238 SPATA31A5Q5VU36 1347 aa18.36■□□□□ 0.53
TSC2-220ENST00000568238 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
TSC2-220ENST00000568238 SPATA31A7Q8IWB4 1347 aa18.36■□□□□ 0.53
TSC2-220ENST00000568238 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
TSC2-220ENST00000568238 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
TSC2-220ENST00000568238 CPDO75976 1380 aa18.35■□□□□ 0.53
TSC2-220ENST00000568238 SBNO2Q9Y2G9 1366 aa18.34■□□□□ 0.53
TSC2-220ENST00000568238 SLIT3O75094 1523 aa18.33■□□□□ 0.53
TSC2-220ENST00000568238 NLRP13Q86W25 1043 aa18.33■□□□□ 0.52
TSC2-220ENST00000568238 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
TSC2-220ENST00000568238 CAMTA1Q9Y6Y1 1673 aa18.32■□□□□ 0.52
TSC2-220ENST00000568238 STRN4Q9NRL3 753 aa18.32■□□□□ 0.52
TSC2-220ENST00000568238 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
TSC2-220ENST00000568238 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
TSC2-220ENST00000568238 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
TSC2-220ENST00000568238 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
TSC2-220ENST00000568238 GCP02774 474 aa18.3■□□□□ 0.52
TSC2-220ENST00000568238 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
TSC2-220ENST00000568238 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
TSC2-220ENST00000568238 EVA1CP58658 441 aa18.28■□□□□ 0.52
TSC2-220ENST00000568238 NLRP6P59044 892 aa18.28■□□□□ 0.52
TSC2-220ENST00000568238 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.52
TSC2-220ENST00000568238 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.52
TSC2-220ENST00000568238 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
TSC2-220ENST00000568238 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
TSC2-220ENST00000568238 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
TSC2-220ENST00000568238 COL18A1P39060 1754 aa18.25■□□□□ 0.51
TSC2-220ENST00000568238 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
TSC2-220ENST00000568238 USP35Q9P2H5 1018 aa18.25■□□□□ 0.51
TSC2-220ENST00000568238 PARP4Q9UKK3 1724 aaKnown RBP18.25■□□□□ 0.51
TSC2-220ENST00000568238 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
TSC2-220ENST00000568238 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
TSC2-220ENST00000568238 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
TSC2-220ENST00000568238 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
TSC2-220ENST00000568238 LARP1Q6PKG0 1096 aaKnown RBP18.24■□□□□ 0.51
TSC2-220ENST00000568238 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
TSC2-220ENST00000568238 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
TSC2-220ENST00000568238 ZBTB7CA1YPR0 619 aa18.23■□□□□ 0.51
TSC2-220ENST00000568238 BARGINQ6ZT62 677 aa18.23■□□□□ 0.51
TSC2-220ENST00000568238 NFAT5O94916 1531 aa18.23■□□□□ 0.51
TSC2-220ENST00000568238 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
TSC2-220ENST00000568238 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
TSC2-220ENST00000568238 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
TSC2-220ENST00000568238 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
TSC2-220ENST00000568238 CRB1P82279 1406 aa18.22■□□□□ 0.51
TSC2-220ENST00000568238 BAG6P46379 1132 aa18.21■□□□□ 0.51
TSC2-220ENST00000568238 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
TSC2-220ENST00000568238 THRAP3Q9Y2W1 955 aaKnown RBP18.2■□□□□ 0.5
TSC2-220ENST00000568238 ABCC6O95255 1503 aa18.19■□□□□ 0.5
TSC2-220ENST00000568238 DISP2A7MBM2 1401 aa18.19■□□□□ 0.5
TSC2-220ENST00000568238 LTN1O94822 1766 aa18.19■□□□□ 0.5
TSC2-220ENST00000568238 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
TSC2-220ENST00000568238 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
TSC2-220ENST00000568238 SOX12O15370 315 aa18.17■□□□□ 0.5
TSC2-220ENST00000568238 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms