RNA–Protein interactions for RNA: ENST00000567959.5

NEIL1-217, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 801 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-217ENST00000567959 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
NEIL1-217ENST00000567959 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
NEIL1-217ENST00000567959 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
NEIL1-217ENST00000567959 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
NEIL1-217ENST00000567959 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
NEIL1-217ENST00000567959 MARF1Q9Y4F3 1742 aaKnown RBP18.41■□□□□ 0.54
NEIL1-217ENST00000567959 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
NEIL1-217ENST00000567959 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
NEIL1-217ENST00000567959 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.54
NEIL1-217ENST00000567959 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
NEIL1-217ENST00000567959 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
NEIL1-217ENST00000567959 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
NEIL1-217ENST00000567959 USP47Q96K76 1375 aa18.38■□□□□ 0.53
NEIL1-217ENST00000567959 USP6P35125 1406 aa18.38■□□□□ 0.53
NEIL1-217ENST00000567959 SLIT2O94813 1529 aa18.38■□□□□ 0.53
NEIL1-217ENST00000567959 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
NEIL1-217ENST00000567959 TESK2Q96S53 571 aa18.37■□□□□ 0.53
NEIL1-217ENST00000567959 ATRNO75882 1429 aa18.37■□□□□ 0.53
NEIL1-217ENST00000567959 UNC5CLQ8IV45 518 aa18.36■□□□□ 0.53
NEIL1-217ENST00000567959 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
NEIL1-217ENST00000567959 RGS12O14924 1447 aa18.35■□□□□ 0.53
NEIL1-217ENST00000567959 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
NEIL1-217ENST00000567959 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
NEIL1-217ENST00000567959 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
NEIL1-217ENST00000567959 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.52
NEIL1-217ENST00000567959 PLCH1Q4KWH8 1693 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 PHRF1Q9P1Y6 1649 aaKnown RBP18.32■□□□□ 0.52
NEIL1-217ENST00000567959 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 GJD4Q96KN9 370 aaPredicted RBP18.32■□□□□ 0.52
NEIL1-217ENST00000567959 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
NEIL1-217ENST00000567959 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
NEIL1-217ENST00000567959 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
NEIL1-217ENST00000567959 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
NEIL1-217ENST00000567959 KIAA0232Q92628 1395 aa18.31■□□□□ 0.52
NEIL1-217ENST00000567959 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
NEIL1-217ENST00000567959 NLRP6P59044 892 aa18.31■□□□□ 0.52
NEIL1-217ENST00000567959 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
NEIL1-217ENST00000567959 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
NEIL1-217ENST00000567959 USP19O94966 1318 aa18.3■□□□□ 0.52
NEIL1-217ENST00000567959 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.3■□□□□ 0.52
NEIL1-217ENST00000567959 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
NEIL1-217ENST00000567959 COL14A1Q05707 1796 aaKnown RBP18.29■□□□□ 0.52
NEIL1-217ENST00000567959 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
NEIL1-217ENST00000567959 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 GCP02774 474 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 TMF1P82094 1093 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 VPS72Q15906 364 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
NEIL1-217ENST00000567959 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
NEIL1-217ENST00000567959 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
NEIL1-217ENST00000567959 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
NEIL1-217ENST00000567959 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
NEIL1-217ENST00000567959 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
NEIL1-217ENST00000567959 GLI3P10071 1580 aa18.26■□□□□ 0.51
NEIL1-217ENST00000567959 SOX12O15370 315 aa18.26■□□□□ 0.51
NEIL1-217ENST00000567959 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
NEIL1-217ENST00000567959 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
NEIL1-217ENST00000567959 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
NEIL1-217ENST00000567959 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
NEIL1-217ENST00000567959 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
NEIL1-217ENST00000567959 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
NEIL1-217ENST00000567959 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
NEIL1-217ENST00000567959 NRAPQ86VF7 1730 aa18.25■□□□□ 0.51
NEIL1-217ENST00000567959 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
NEIL1-217ENST00000567959 SLIT3O75094 1523 aa18.23■□□□□ 0.51
NEIL1-217ENST00000567959 CPDO75976 1380 aa18.23■□□□□ 0.51
NEIL1-217ENST00000567959 NME9Q86XW9 330 aa18.23■□□□□ 0.51
NEIL1-217ENST00000567959 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
NEIL1-217ENST00000567959 A0A0G2JS52 829 aa18.21■□□□□ 0.51
NEIL1-217ENST00000567959 MYT1Q01538 1121 aa18.21■□□□□ 0.51
NEIL1-217ENST00000567959 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.51
NEIL1-217ENST00000567959 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
NEIL1-217ENST00000567959 EVA1CP58658 441 aa18.2■□□□□ 0.5
NEIL1-217ENST00000567959 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
NEIL1-217ENST00000567959 SEPT12Q8IYM1 358 aa18.2■□□□□ 0.5
NEIL1-217ENST00000567959 CAMTA1Q9Y6Y1 1673 aa18.19■□□□□ 0.5
NEIL1-217ENST00000567959 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
NEIL1-217ENST00000567959 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
NEIL1-217ENST00000567959 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
NEIL1-217ENST00000567959 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
NEIL1-217ENST00000567959 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
NEIL1-217ENST00000567959 MYOM1P52179 1685 aa18.18■□□□□ 0.5
NEIL1-217ENST00000567959 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
NEIL1-217ENST00000567959 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
NEIL1-217ENST00000567959 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
NEIL1-217ENST00000567959 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
NEIL1-217ENST00000567959 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
NEIL1-217ENST00000567959 SPATA31A1Q5TZJ5 1347 aa18.16■□□□□ 0.5
NEIL1-217ENST00000567959 C11orf95C9JLR9 678 aaPredicted RBP18.15■□□□□ 0.5
NEIL1-217ENST00000567959 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
NEIL1-217ENST00000567959 ARHGEF25Q86VW2 580 aa18.15■□□□□ 0.5
NEIL1-217ENST00000567959 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
NEIL1-217ENST00000567959 NFAT5O94916 1531 aa18.14■□□□□ 0.49
NEIL1-217ENST00000567959 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
NEIL1-217ENST00000567959 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
NEIL1-217ENST00000567959 KRT27Q7Z3Y8 459 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms