RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
TCF4-236ENST00000567880 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
TCF4-236ENST00000567880 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
TCF4-236ENST00000567880 ACEP12821 1306 aa14.15□□□□□ -0.14
TCF4-236ENST00000567880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.14
TCF4-236ENST00000567880 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
TCF4-236ENST00000567880 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
TCF4-236ENST00000567880 EDC4Q6P2E9 1401 aaKnown RBP14.13□□□□□ -0.15
TCF4-236ENST00000567880 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
TCF4-236ENST00000567880 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
TCF4-236ENST00000567880 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
TCF4-236ENST00000567880 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
TCF4-236ENST00000567880 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
TCF4-236ENST00000567880 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
TCF4-236ENST00000567880 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
TCF4-236ENST00000567880 LRRC7Q96NW7 1537 aa14.12□□□□□ -0.15
TCF4-236ENST00000567880 ATF3P18847 181 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 NLRP13Q86W25 1043 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 NSD2O96028 1365 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 NCOA3Q9Y6Q9 1424 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 FYB1O15117 783 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 PPP2R1AP30153 589 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 MSH6P52701 1360 aa14.11□□□□□ -0.15
TCF4-236ENST00000567880 USP6P35125 1406 aa14.1□□□□□ -0.15
TCF4-236ENST00000567880 BRD4O60885 1362 aaPredicted RBP14.1□□□□□ -0.15
TCF4-236ENST00000567880 POLR3AO14802 1390 aaPredicted RBP14.1□□□□□ -0.15
TCF4-236ENST00000567880 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
TCF4-236ENST00000567880 DCCP43146 1447 aa14.09□□□□□ -0.15
TCF4-236ENST00000567880 NME9Q86XW9 330 aa14.09□□□□□ -0.15
TCF4-236ENST00000567880 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
TCF4-236ENST00000567880 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
TCF4-236ENST00000567880 C1orf167Q5SNV9 1468 aa14.08□□□□□ -0.16
TCF4-236ENST00000567880 MAP2P11137 1827 aaKnown RBP14.08□□□□□ -0.16
TCF4-236ENST00000567880 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
TCF4-236ENST00000567880 MST1RQ04912 1400 aa14.07□□□□□ -0.16
TCF4-236ENST00000567880 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
TCF4-236ENST00000567880 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
TCF4-236ENST00000567880 TTC21BQ7Z4L5 1316 aa14.07□□□□□ -0.16
TCF4-236ENST00000567880 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
TCF4-236ENST00000567880 FOXO3O43524 673 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
TCF4-236ENST00000567880 PSME1Q06323 249 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 COG3Q96JB2 828 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 PIK3C2AO00443 1686 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 SSH2Q76I76 1423 aa14.04□□□□□ -0.16
TCF4-236ENST00000567880 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
TCF4-236ENST00000567880 PNISRQ8TF01 805 aaKnown RBP14.03□□□□□ -0.16
TCF4-236ENST00000567880 TTC21AQ8NDW8 1320 aa14.03□□□□□ -0.16
TCF4-236ENST00000567880 LTBP4Q8N2S1 1624 aa14.02□□□□□ -0.17
TCF4-236ENST00000567880 MTHFSP49914 203 aa14.02□□□□□ -0.17
TCF4-236ENST00000567880 FBLN1P23142 703 aa14.01□□□□□ -0.17
TCF4-236ENST00000567880 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
TCF4-236ENST00000567880 MARF1Q9Y4F3 1742 aaKnown RBP14□□□□□ -0.17
TCF4-236ENST00000567880 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
TCF4-236ENST00000567880 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
TCF4-236ENST00000567880 ABTB2Q8N961 1025 aa14□□□□□ -0.17
TCF4-236ENST00000567880 DDX17Q92841 729 aaKnown RBP14□□□□□ -0.17
TCF4-236ENST00000567880 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
TCF4-236ENST00000567880 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
TCF4-236ENST00000567880 SOX12O15370 315 aa13.99□□□□□ -0.17
TCF4-236ENST00000567880 NLRP6P59044 892 aa13.99□□□□□ -0.17
TCF4-236ENST00000567880 SLAIN2Q9P270 581 aa13.99□□□□□ -0.17
TCF4-236ENST00000567880 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCF4-236ENST00000567880 SHPRHQ149N8 1683 aa13.98□□□□□ -0.17
TCF4-236ENST00000567880 WDR43Q15061 677 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCF4-236ENST00000567880 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
TCF4-236ENST00000567880 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
TCF4-236ENST00000567880 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
TCF4-236ENST00000567880 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
TCF4-236ENST00000567880 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
TCF4-236ENST00000567880 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
TCF4-236ENST00000567880 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
TCF4-236ENST00000567880 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.18
TCF4-236ENST00000567880 PLEKHG5O94827 1062 aa13.96□□□□□ -0.18
TCF4-236ENST00000567880 POLKQ9UBT6 870 aa13.96□□□□□ -0.18
TCF4-236ENST00000567880 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.18
TCF4-236ENST00000567880 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
TCF4-236ENST00000567880 AATKQ6ZMQ8 1374 aa13.95□□□□□ -0.18
TCF4-236ENST00000567880 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
TCF4-236ENST00000567880 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
TCF4-236ENST00000567880 ADAMTS8Q9UP79 889 aa13.94□□□□□ -0.18
TCF4-236ENST00000567880 LTN1O94822 1766 aa13.94□□□□□ -0.18
TCF4-236ENST00000567880 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
TCF4-236ENST00000567880 PXDNQ92626 1479 aa13.92□□□□□ -0.18
TCF4-236ENST00000567880 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
TCF4-236ENST00000567880 ROBO1Q9Y6N7 1651 aa13.92□□□□□ -0.18
TCF4-236ENST00000567880 SMG6Q86US8 1419 aaKnown RBP13.91□□□□□ -0.18
TCF4-236ENST00000567880 CDK12Q9NYV4 1490 aaPredicted RBP13.91□□□□□ -0.18
TCF4-236ENST00000567880 NHSL1Q5SYE7 1610 aa13.91□□□□□ -0.18
TCF4-236ENST00000567880 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.18
TCF4-236ENST00000567880 DIAPH1O60610 1272 aaKnown RBP13.9□□□□□ -0.18
TCF4-236ENST00000567880 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
TCF4-236ENST00000567880 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
TCF4-236ENST00000567880 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
TCF4-236ENST00000567880 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
TCF4-236ENST00000567880 TNS3Q68CZ2 1445 aa13.89□□□□□ -0.19
TCF4-236ENST00000567880 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
TCF4-236ENST00000567880 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms