RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 FAM98CQ17RN3 349 aaKnown RBP33.63■■■□□ 2.97
CNEP1R1-209ENST00000567712 ATP7BP35670 1465 aa33.62■■■□□ 2.97
CNEP1R1-209ENST00000567712 NGDNQ8NEJ9 315 aaKnown RBP33.61■■■□□ 2.97
CNEP1R1-209ENST00000567712 ITSN1Q15811 1721 aa33.59■■■□□ 2.97
CNEP1R1-209ENST00000567712 PAK3O75914 559 aaPredicted RBP33.58■■■□□ 2.97
CNEP1R1-209ENST00000567712 A0A0G2JS52 829 aa33.57■■■□□ 2.96
CNEP1R1-209ENST00000567712 MYT1Q01538 1121 aa33.57■■■□□ 2.96
CNEP1R1-209ENST00000567712 NUDT16Q96DE0 195 aaKnown RBP33.57■■■□□ 2.96
CNEP1R1-209ENST00000567712 STAC3Q96MF2 364 aa33.57■■■□□ 2.96
CNEP1R1-209ENST00000567712 HRCP23327 699 aa33.56■■■□□ 2.96
CNEP1R1-209ENST00000567712 SF3B2Q13435 895 aaKnown RBP33.56■■■□□ 2.96
CNEP1R1-209ENST00000567712 FAM182BQ5T319 152 aa33.55■■■□□ 2.96
CNEP1R1-209ENST00000567712 SPATA31A5Q5VU36 1347 aa33.54■■■□□ 2.96
CNEP1R1-209ENST00000567712 SPATA31A7Q8IWB4 1347 aa33.54■■■□□ 2.96
CNEP1R1-209ENST00000567712 PHRF1Q9P1Y6 1649 aaKnown RBP33.53■■■□□ 2.96
CNEP1R1-209ENST00000567712 THSD7AQ9UPZ6 1657 aa33.52■■■□□ 2.96
CNEP1R1-209ENST00000567712 CDK19Q9BWU1 502 aa33.52■■■□□ 2.96
CNEP1R1-209ENST00000567712 TOPAZ1Q8N9V7 1692 aa33.52■■■□□ 2.96
CNEP1R1-209ENST00000567712 PRDM11Q9NQV5 511 aa33.5■■■□□ 2.95
CNEP1R1-209ENST00000567712 KIAA0232Q92628 1395 aa33.48■■■□□ 2.95
CNEP1R1-209ENST00000567712 CHRNA2Q15822 529 aa33.48■■■□□ 2.95
CNEP1R1-209ENST00000567712 NUTM2GQ5VZR2 741 aa33.48■■■□□ 2.95
CNEP1R1-209ENST00000567712 KIAA1210Q9ULL0 1709 aa33.47■■■□□ 2.95
CNEP1R1-209ENST00000567712 NBPF1Q3BBV0 1214 aa33.45■■■□□ 2.95
CNEP1R1-209ENST00000567712 POLR3AO14802 1390 aaPredicted RBP33.45■■■□□ 2.94
CNEP1R1-209ENST00000567712 RGPD1P0DJD0 1748 aa33.45■■■□□ 2.94
CNEP1R1-209ENST00000567712 ACEP12821 1306 aa33.44■■■□□ 2.94
CNEP1R1-209ENST00000567712 PSDA5PKW4 1024 aaPredicted RBP33.42■■■□□ 2.94
CNEP1R1-209ENST00000567712 BAG6P46379 1132 aa33.42■■■□□ 2.94
CNEP1R1-209ENST00000567712 ZC3H6P61129 1189 aaKnown RBP33.42■■■□□ 2.94
CNEP1R1-209ENST00000567712 SPATA31A1Q5TZJ5 1347 aa33.42■■■□□ 2.94
CNEP1R1-209ENST00000567712 TNS1Q9HBL0 1735 aaKnown RBP33.42■■■□□ 2.94
CNEP1R1-209ENST00000567712 EN1Q05925 392 aaPredicted RBP33.41■■■□□ 2.94
CNEP1R1-209ENST00000567712 NBPF8Q3BBV2 869 aa33.41■■■□□ 2.94
CNEP1R1-209ENST00000567712 STRN4Q9NRL3 753 aa33.39■■■□□ 2.94
CNEP1R1-209ENST00000567712 CCDC61Q9Y6R9 512 aa33.39■■■□□ 2.94
CNEP1R1-209ENST00000567712 LRP5O75197 1615 aa33.39■■■□□ 2.93
CNEP1R1-209ENST00000567712 PLEKHG3A1L390 1219 aa33.38■■■□□ 2.93
CNEP1R1-209ENST00000567712 NRKQ7Z2Y5 1582 aa33.38■■■□□ 2.93
CNEP1R1-209ENST00000567712 CAMTA1Q9Y6Y1 1673 aa33.34■■■□□ 2.93
CNEP1R1-209ENST00000567712 LMO7Q8WWI1 1683 aa33.32■■■□□ 2.92
CNEP1R1-209ENST00000567712 USP35Q9P2H5 1018 aa33.31■■■□□ 2.92
CNEP1R1-209ENST00000567712 DISP2A7MBM2 1401 aa33.3■■■□□ 2.92
CNEP1R1-209ENST00000567712 SSH2Q76I76 1423 aa33.3■■■□□ 2.92
CNEP1R1-209ENST00000567712 ABTB2Q8N961 1025 aa33.3■■■□□ 2.92
CNEP1R1-209ENST00000567712 USP19O94966 1318 aa33.28■■■□□ 2.92
CNEP1R1-209ENST00000567712 EZH2Q15910 746 aaKnown RBP33.28■■■□□ 2.92
CNEP1R1-209ENST00000567712 CABP2Q9NPB3 220 aa33.28■■■□□ 2.92
CNEP1R1-209ENST00000567712 TRIM37O94972 964 aa33.27■■■□□ 2.92
CNEP1R1-209ENST00000567712 LARP1Q6PKG0 1096 aaKnown RBP33.27■■■□□ 2.92
CNEP1R1-209ENST00000567712 PPIP5K1Q6PFW1 1433 aa33.27■■■□□ 2.92
CNEP1R1-209ENST00000567712 QRICH2Q9H0J4 1663 aa33.26■■■□□ 2.92
CNEP1R1-209ENST00000567712 CENPJQ9HC77 1338 aaPredicted RBP33.25■■■□□ 2.91
CNEP1R1-209ENST00000567712 CPDO75976 1380 aa33.24■■■□□ 2.91
CNEP1R1-209ENST00000567712 EVA1CP58658 441 aa33.24■■■□□ 2.91
CNEP1R1-209ENST00000567712 SRPK2P78362 688 aaKnown RBP33.24■■■□□ 2.91
CNEP1R1-209ENST00000567712 R3HDM1Q15032 1099 aaKnown RBP33.23■■■□□ 2.91
CNEP1R1-209ENST00000567712 BARGINQ6ZT62 677 aa33.23■■■□□ 2.91
CNEP1R1-209ENST00000567712 CAMKK2Q96RR4 588 aa33.23■■■□□ 2.91
CNEP1R1-209ENST00000567712 FAM196AQ6ZSG2 479 aa33.22■■■□□ 2.91
CNEP1R1-209ENST00000567712 GCP02774 474 aa33.2■■■□□ 2.91
CNEP1R1-209ENST00000567712 NLRP13Q86W25 1043 aa33.17■■■□□ 2.9
CNEP1R1-209ENST00000567712 TCP11L2Q8N4U5 519 aa33.17■■■□□ 2.9
CNEP1R1-209ENST00000567712 CABP1Q9NZU7 370 aa33.16■■■□□ 2.9
CNEP1R1-209ENST00000567712 COL5A2P05997 1499 aaPredicted RBP33.16■■■□□ 2.9
CNEP1R1-209ENST00000567712 APBA3O96018 575 aa33.15■■■□□ 2.9
CNEP1R1-209ENST00000567712 RREB1Q92766 1687 aa33.15■■■□□ 2.9
CNEP1R1-209ENST00000567712 L3MBTL2Q969R5 705 aa33.15■■■□□ 2.9
CNEP1R1-209ENST00000567712 USP6P35125 1406 aa33.14■■■□□ 2.9
CNEP1R1-209ENST00000567712 PDE3BQ13370 1112 aa33.14■■■□□ 2.9
CNEP1R1-209ENST00000567712 PARP4Q9UKK3 1724 aaKnown RBP33.13■■■□□ 2.89
CNEP1R1-209ENST00000567712 NUP188Q5SRE5 1749 aa33.11■■■□□ 2.89
CNEP1R1-209ENST00000567712 PIK3C2AO00443 1686 aa33.11■■■□□ 2.89
CNEP1R1-209ENST00000567712 TRPM1Q7Z4N2 1603 aa33.11■■■□□ 2.89
CNEP1R1-209ENST00000567712 COL18A1P39060 1754 aa33.11■■■□□ 2.89
CNEP1R1-209ENST00000567712 SIN3AQ96ST3 1273 aa33.1■■■□□ 2.89
CNEP1R1-209ENST00000567712 SLIT3O75094 1523 aa33.1■■■□□ 2.89
CNEP1R1-209ENST00000567712 ZBTB7CA1YPR0 619 aa33.08■■■□□ 2.89
CNEP1R1-209ENST00000567712 NLRP6P59044 892 aa33.08■■■□□ 2.89
CNEP1R1-209ENST00000567712 BRD4O60885 1362 aaPredicted RBP33.08■■■□□ 2.89
CNEP1R1-209ENST00000567712 THRAP3Q9Y2W1 955 aaKnown RBP33.07■■■□□ 2.88
CNEP1R1-209ENST00000567712 PEAK1Q9H792 1746 aa33.05■■■□□ 2.88
CNEP1R1-209ENST00000567712 CRB1P82279 1406 aa33.05■■■□□ 2.88
CNEP1R1-209ENST00000567712 RGPD5Q99666 1765 aa33.04■■■□□ 2.88
CNEP1R1-209ENST00000567712 PARD3Q8TEW0 1356 aa33.04■■■□□ 2.88
CNEP1R1-209ENST00000567712 SBF2Q86WG5 1849 aa33.04■■■□□ 2.88
CNEP1R1-209ENST00000567712 AATKQ6ZMQ8 1374 aa33.03■■■□□ 2.88
CNEP1R1-209ENST00000567712 AKAP12Q02952 1782 aa33.03■■■□□ 2.88
CNEP1R1-209ENST00000567712 AXIN2Q9Y2T1 843 aa33.02■■■□□ 2.88
CNEP1R1-209ENST00000567712 LRRC37A3O60309 1634 aa33.02■■■□□ 2.88
CNEP1R1-209ENST00000567712 WNK3Q9BYP7 1800 aa33■■■□□ 2.87
CNEP1R1-209ENST00000567712 EVC2Q86UK5 1308 aa33■■■□□ 2.87
CNEP1R1-209ENST00000567712 NEUROD1Q13562 356 aa32.95■■■□□ 2.87
CNEP1R1-209ENST00000567712 PTF1AQ7RTS3 328 aa32.95■■■□□ 2.87
CNEP1R1-209ENST00000567712 TTC21BQ7Z4L5 1316 aa32.95■■■□□ 2.86
CNEP1R1-209ENST00000567712 ROCK2O75116 1388 aaKnown RBP32.94■■■□□ 2.86
CNEP1R1-209ENST00000567712 TOM1L2Q6ZVM7 507 aa32.93■■■□□ 2.86
CNEP1R1-209ENST00000567712 CPSF1Q10570 1443 aaKnown RBP32.93■■■□□ 2.86
CNEP1R1-209ENST00000567712 ARHGEF25Q86VW2 580 aa32.92■■■□□ 2.86
CNEP1R1-209ENST00000567712 OVOS2A0A0G2JMS6 1433 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms