RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 VPS72Q15906 364 aa21.77■■□□□ 1.08
SCAMP2-209ENST00000567638 FAM83GA6ND36 823 aa21.76■■□□□ 1.07
SCAMP2-209ENST00000567638 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
SCAMP2-209ENST00000567638 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
SCAMP2-209ENST00000567638 L3MBTL2Q969R5 705 aa21.74■■□□□ 1.07
SCAMP2-209ENST00000567638 CENPJQ9HC77 1338 aaPredicted RBP21.73■■□□□ 1.07
SCAMP2-209ENST00000567638 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
SCAMP2-209ENST00000567638 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
SCAMP2-209ENST00000567638 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
SCAMP2-209ENST00000567638 EP400Q96L91 3159 aa21.71■■□□□ 1.07
SCAMP2-209ENST00000567638 ACEP12821 1306 aa21.71■■□□□ 1.07
SCAMP2-209ENST00000567638 BTG4Q9NY30 223 aa21.7■■□□□ 1.06
SCAMP2-209ENST00000567638 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
SCAMP2-209ENST00000567638 CCDC125Q86Z20 511 aa21.69■■□□□ 1.06
SCAMP2-209ENST00000567638 SEPT12Q8IYM1 358 aa21.69■■□□□ 1.06
SCAMP2-209ENST00000567638 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
SCAMP2-209ENST00000567638 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
SCAMP2-209ENST00000567638 NRKQ7Z2Y5 1582 aa21.68■■□□□ 1.06
SCAMP2-209ENST00000567638 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
SCAMP2-209ENST00000567638 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
SCAMP2-209ENST00000567638 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
SCAMP2-209ENST00000567638 BLMP54132 1417 aaPredicted RBP21.65■■□□□ 1.06
SCAMP2-209ENST00000567638 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
SCAMP2-209ENST00000567638 THSD7AQ9UPZ6 1657 aa21.65■■□□□ 1.06
SCAMP2-209ENST00000567638 KIAA0232Q92628 1395 aa21.64■■□□□ 1.06
SCAMP2-209ENST00000567638 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
SCAMP2-209ENST00000567638 CABP2Q9NPB3 220 aa21.63■■□□□ 1.05
SCAMP2-209ENST00000567638 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
SCAMP2-209ENST00000567638 SPATA31A5Q5VU36 1347 aa21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 SPATA31A7Q8IWB4 1347 aa21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 LMO7Q8WWI1 1683 aa21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 FAM98CQ17RN3 349 aaKnown RBP21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 KRT27Q7Z3Y8 459 aa21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 AKAP12Q02952 1782 aa21.61■■□□□ 1.05
SCAMP2-209ENST00000567638 A0A0G2JS52 829 aa21.6■■□□□ 1.05
SCAMP2-209ENST00000567638 MYT1Q01538 1121 aa21.6■■□□□ 1.05
SCAMP2-209ENST00000567638 ABTB2Q8N961 1025 aa21.6■■□□□ 1.05
SCAMP2-209ENST00000567638 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
SCAMP2-209ENST00000567638 USP19O94966 1318 aa21.59■■□□□ 1.05
SCAMP2-209ENST00000567638 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
SCAMP2-209ENST00000567638 CHRNA2Q15822 529 aa21.59■■□□□ 1.05
SCAMP2-209ENST00000567638 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.05
SCAMP2-209ENST00000567638 USP6P35125 1406 aa21.58■■□□□ 1.05
SCAMP2-209ENST00000567638 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
SCAMP2-209ENST00000567638 PIK3C2AO00443 1686 aa21.57■■□□□ 1.04
SCAMP2-209ENST00000567638 CPDO75976 1380 aa21.56■■□□□ 1.04
SCAMP2-209ENST00000567638 CAMTA1Q9Y6Y1 1673 aa21.56■■□□□ 1.04
SCAMP2-209ENST00000567638 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
SCAMP2-209ENST00000567638 CABP1Q9NZU7 370 aa21.55■■□□□ 1.04
SCAMP2-209ENST00000567638 ZRANB1Q9UGI0 708 aa21.55■■□□□ 1.04
SCAMP2-209ENST00000567638 SLIT3O75094 1523 aa21.55■■□□□ 1.04
SCAMP2-209ENST00000567638 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
SCAMP2-209ENST00000567638 SF3B2Q13435 895 aaKnown RBP21.54■■□□□ 1.04
SCAMP2-209ENST00000567638 STRN4Q9NRL3 753 aa21.54■■□□□ 1.04
SCAMP2-209ENST00000567638 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
SCAMP2-209ENST00000567638 TNS1Q9HBL0 1735 aaKnown RBP21.53■■□□□ 1.04
SCAMP2-209ENST00000567638 DEFB132Q7Z7B7 95 aa21.52■■□□□ 1.04
SCAMP2-209ENST00000567638 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.03
SCAMP2-209ENST00000567638 GCP02774 474 aa21.5■■□□□ 1.03
SCAMP2-209ENST00000567638 SBNO2Q9Y2G9 1366 aa21.49■■□□□ 1.03
SCAMP2-209ENST00000567638 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
SCAMP2-209ENST00000567638 COL18A1P39060 1754 aa21.48■■□□□ 1.03
SCAMP2-209ENST00000567638 COL5A2P05997 1499 aaPredicted RBP21.48■■□□□ 1.03
SCAMP2-209ENST00000567638 EVA1CP58658 441 aa21.48■■□□□ 1.03
SCAMP2-209ENST00000567638 PARP4Q9UKK3 1724 aaKnown RBP21.47■■□□□ 1.03
SCAMP2-209ENST00000567638 NLRP6P59044 892 aa21.47■■□□□ 1.03
SCAMP2-209ENST00000567638 FAM182BQ5T319 152 aa21.47■■□□□ 1.03
SCAMP2-209ENST00000567638 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
SCAMP2-209ENST00000567638 RGPD5Q99666 1765 aa21.46■■□□□ 1.03
SCAMP2-209ENST00000567638 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
SCAMP2-209ENST00000567638 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.03
SCAMP2-209ENST00000567638 BAG6P46379 1132 aa21.45■■□□□ 1.02
SCAMP2-209ENST00000567638 LARP1Q6PKG0 1096 aaKnown RBP21.45■■□□□ 1.02
SCAMP2-209ENST00000567638 BARGINQ6ZT62 677 aa21.45■■□□□ 1.02
SCAMP2-209ENST00000567638 ZNF692Q9BU19 519 aaPredicted RBP21.45■■□□□ 1.02
SCAMP2-209ENST00000567638 CARD11Q9BXL7 1154 aa21.45■■□□□ 1.02
SCAMP2-209ENST00000567638 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
SCAMP2-209ENST00000567638 TTC21BQ7Z4L5 1316 aa21.43■■□□□ 1.02
SCAMP2-209ENST00000567638 AATKQ6ZMQ8 1374 aa21.43■■□□□ 1.02
SCAMP2-209ENST00000567638 DISP2A7MBM2 1401 aa21.42■■□□□ 1.02
SCAMP2-209ENST00000567638 TCP11L2Q8N4U5 519 aa21.42■■□□□ 1.02
SCAMP2-209ENST00000567638 TTC21AQ8NDW8 1320 aa21.42■■□□□ 1.02
SCAMP2-209ENST00000567638 CRB1P82279 1406 aa21.41■■□□□ 1.02
SCAMP2-209ENST00000567638 KTN1Q86UP2 1357 aaKnown RBP21.41■■□□□ 1.02
SCAMP2-209ENST00000567638 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
SCAMP2-209ENST00000567638 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
SCAMP2-209ENST00000567638 THRAP3Q9Y2W1 955 aaKnown RBP21.4■■□□□ 1.02
SCAMP2-209ENST00000567638 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
SCAMP2-209ENST00000567638 NFAT5O94916 1531 aa21.39■■□□□ 1.02
SCAMP2-209ENST00000567638 FAM196AQ6ZSG2 479 aa21.39■■□□□ 1.01
SCAMP2-209ENST00000567638 CD163L1Q9NR16 1453 aa21.39■■□□□ 1.01
SCAMP2-209ENST00000567638 KCNH5Q8NCM2 988 aa21.37■■□□□ 1.01
SCAMP2-209ENST00000567638 LTN1O94822 1766 aa21.37■■□□□ 1.01
SCAMP2-209ENST00000567638 LRP5O75197 1615 aa21.37■■□□□ 1.01
SCAMP2-209ENST00000567638 ABCC6O95255 1503 aa21.36■■□□□ 1.01
SCAMP2-209ENST00000567638 EN1Q05925 392 aaPredicted RBP21.36■■□□□ 1.01
SCAMP2-209ENST00000567638 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
SCAMP2-209ENST00000567638 RREB1Q92766 1687 aa21.36■■□□□ 1.01
SCAMP2-209ENST00000567638 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
SCAMP2-209ENST00000567638 SBF2Q86WG5 1849 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms