RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 SLC26A8Q96RN1 970 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 PRAM1Q96QH2 718 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 NOS1P29475 1434 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 RPRD2Q5VT52 1461 aaKnown RBP7.6□□□□□ -1.19
CDH13-209ENST00000567109 KCNA6P17658 529 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 LMOD3Q0VAK6 560 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 TMEM132EQ6IEE7 984 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 ERCC6L2Q5T890 1561 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 GOLGA6L3A6NEY3 463 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 NINLQ9Y2I6 1382 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 GSE1Q14687 1217 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
CDH13-209ENST00000567109 AMOTL2Q9Y2J4 779 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 ERICH2A1L162 156 aa7.6□□□□□ -1.19
CDH13-209ENST00000567109 CCDC7Q96M83 1385 aa7.59□□□□□ -1.19
CDH13-209ENST00000567109 CCAR2Q8N163 923 aaKnown RBP7.59□□□□□ -1.19
CDH13-209ENST00000567109 NEXNQ0ZGT2 675 aa7.59□□□□□ -1.19
CDH13-209ENST00000567109 LRPPRCP42704 1394 aaKnown RBP7.59□□□□□ -1.19
CDH13-209ENST00000567109 SMC4Q9NTJ3 1288 aa7.59□□□□□ -1.19
CDH13-209ENST00000567109 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 MYBBP1AQ9BQG0 1328 aaKnown RBP7.58□□□□□ -1.2
CDH13-209ENST00000567109 GLI2P10070 1586 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 CHMP4CQ96CF2 233 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 PHF8Q9UPP1 1060 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 CADPS2Q86UW7 1296 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 TAF3Q5VWG9 929 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 ANKRD20A12PQ8NF67 263 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 PANK3Q9H999 370 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 HOOK1Q9UJC3 728 aaKnown RBP7.58□□□□□ -1.2
CDH13-209ENST00000567109 MCTP1Q6DN14 999 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 KIF7Q2M1P5 1343 aa7.58□□□□□ -1.2
CDH13-209ENST00000567109 ABCC1P33527 1531 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 PIK3R4Q99570 1358 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 GZF1Q9H116 711 aaPredicted RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 SPDYE4A6NLX3 237 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 CPLX2Q6PUV4 134 aaKnown RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 SCAF11Q99590 1463 aaKnown RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 IPO7O95373 1038 aaKnown RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 RILPL2Q969X0 211 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 FYB1O15117 783 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 RDXP35241 583 aaKnown RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 SLC4A3P48751 1232 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 C9orf78Q9NZ63 289 aaPredicted RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 ARHGEF12Q9NZN5 1544 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 HMGB2P26583 209 aaKnown RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
CDH13-209ENST00000567109 CCDC97Q96F63 343 aaPredicted RBP7.57□□□□□ -1.2
CDH13-209ENST00000567109 TEFQ10587 303 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 TRDNQ13061 729 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 RRP9O43818 475 aaKnown RBP7.56□□□□□ -1.2
CDH13-209ENST00000567109 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
CDH13-209ENST00000567109 AGLP35573 1532 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 WASLO00401 505 aaPredicted RBP7.56□□□□□ -1.2
CDH13-209ENST00000567109 ST18O60284 1047 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 TOM1O60784 492 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 CENPQQ7L2Z9 268 aaPredicted RBP7.56□□□□□ -1.2
CDH13-209ENST00000567109 PMFBP1Q8TBY8 1022 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 CCDC61Q9Y6R9 512 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 NAP1L1P55209 391 aaKnown RBP7.56□□□□□ -1.2
CDH13-209ENST00000567109 PBRM1Q86U86 1689 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 PTPRTO14522 1441 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 NPATQ14207 1427 aa7.56□□□□□ -1.2
CDH13-209ENST00000567109 DHX8Q14562 1220 aaKnown RBP7.55□□□□□ -1.2
CDH13-209ENST00000567109 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
CDH13-209ENST00000567109 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 CDK19Q9BWU1 502 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 CABP2Q9NPB3 220 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 KCNH5Q8NCM2 988 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
CDH13-209ENST00000567109 NLRP6P59044 892 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 PZPP20742 1482 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 TMEM87AQ8NBN3 555 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 NSD2O96028 1365 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 MFAP1P55081 439 aaKnown RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
CDH13-209ENST00000567109 ABCC11Q96J66 1382 aa7.54□□□□□ -1.2
CDH13-209ENST00000567109 MSH6P52701 1360 aa7.53□□□□□ -1.2
CDH13-209ENST00000567109 PAXIP1Q6ZW49 1069 aaPredicted RBP7.53□□□□□ -1.2
CDH13-209ENST00000567109 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
CDH13-209ENST00000567109 GPS2Q13227 327 aa7.53□□□□□ -1.2
CDH13-209ENST00000567109 PRKRIP1Q9H875 184 aaPredicted RBP7.53□□□□□ -1.2
CDH13-209ENST00000567109 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
CDH13-209ENST00000567109 EIF2S2P20042 333 aaKnown RBP7.52□□□□□ -1.2
CDH13-209ENST00000567109 HMGN5P82970 282 aaKnown RBP7.52□□□□□ -1.2
CDH13-209ENST00000567109 MTMR7Q9Y216 660 aa7.52□□□□□ -1.21
CDH13-209ENST00000567109 NPHP4O75161 1426 aaPredicted RBP7.52□□□□□ -1.21
CDH13-209ENST00000567109 BECN2A8MW95 431 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms