RNA–Protein interactions for RNA: ENST00000567040.5

PPP4C-210, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-210ENST00000567040 VPS72Q15906 364 aa25.36■■□□□ 1.65
PPP4C-210ENST00000567040 NUTM2GQ5VZR2 741 aa25.36■■□□□ 1.65
PPP4C-210ENST00000567040 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
PPP4C-210ENST00000567040 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
PPP4C-210ENST00000567040 TOPAZ1Q8N9V7 1692 aa25.34■■□□□ 1.65
PPP4C-210ENST00000567040 BTG4Q9NY30 223 aa25.34■■□□□ 1.65
PPP4C-210ENST00000567040 QRICH2Q9H0J4 1663 aa25.32■■□□□ 1.64
PPP4C-210ENST00000567040 PHRF1Q9P1Y6 1649 aaKnown RBP25.3■■□□□ 1.64
PPP4C-210ENST00000567040 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
PPP4C-210ENST00000567040 FAM98CQ17RN3 349 aaKnown RBP25.29■■□□□ 1.64
PPP4C-210ENST00000567040 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
PPP4C-210ENST00000567040 PRDM11Q9NQV5 511 aa25.29■■□□□ 1.64
PPP4C-210ENST00000567040 SRPK2P78362 688 aaKnown RBP25.28■■□□□ 1.64
PPP4C-210ENST00000567040 ACEP12821 1306 aa25.28■■□□□ 1.64
PPP4C-210ENST00000567040 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
PPP4C-210ENST00000567040 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
PPP4C-210ENST00000567040 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
PPP4C-210ENST00000567040 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
PPP4C-210ENST00000567040 KRT27Q7Z3Y8 459 aa25.25■■□□□ 1.63
PPP4C-210ENST00000567040 CABP2Q9NPB3 220 aa25.25■■□□□ 1.63
PPP4C-210ENST00000567040 EP400Q96L91 3159 aa25.25■■□□□ 1.63
PPP4C-210ENST00000567040 DEFB132Q7Z7B7 95 aa25.24■■□□□ 1.63
PPP4C-210ENST00000567040 CCDC125Q86Z20 511 aa25.24■■□□□ 1.63
PPP4C-210ENST00000567040 STRN4Q9NRL3 753 aa25.24■■□□□ 1.63
PPP4C-210ENST00000567040 ZRANB1Q9UGI0 708 aa25.24■■□□□ 1.63
PPP4C-210ENST00000567040 BLMP54132 1417 aaPredicted RBP25.23■■□□□ 1.63
PPP4C-210ENST00000567040 KIAA0232Q92628 1395 aa25.23■■□□□ 1.63
PPP4C-210ENST00000567040 SF3B2Q13435 895 aaKnown RBP25.23■■□□□ 1.63
PPP4C-210ENST00000567040 NBPF8Q3BBV2 869 aa25.23■■□□□ 1.63
PPP4C-210ENST00000567040 CCDC61Q9Y6R9 512 aa25.23■■□□□ 1.63
PPP4C-210ENST00000567040 PPIP5K1Q6PFW1 1433 aa25.21■■□□□ 1.63
PPP4C-210ENST00000567040 FAM182BQ5T319 152 aa25.21■■□□□ 1.63
PPP4C-210ENST00000567040 TRPM1Q7Z4N2 1603 aa25.21■■□□□ 1.63
PPP4C-210ENST00000567040 POLR3AO14802 1390 aaPredicted RBP25.19■■□□□ 1.62
PPP4C-210ENST00000567040 ABTB2Q8N961 1025 aa25.19■■□□□ 1.62
PPP4C-210ENST00000567040 ZBTB7CA1YPR0 619 aa25.18■■□□□ 1.62
PPP4C-210ENST00000567040 SPATA31A5Q5VU36 1347 aa25.17■■□□□ 1.62
PPP4C-210ENST00000567040 SPATA31A7Q8IWB4 1347 aa25.17■■□□□ 1.62
PPP4C-210ENST00000567040 PLEKHG3A1L390 1219 aa25.17■■□□□ 1.62
PPP4C-210ENST00000567040 ONECUT3O60422 494 aaPredicted RBP25.17■■□□□ 1.62
PPP4C-210ENST00000567040 USP35Q9P2H5 1018 aa25.17■■□□□ 1.62
PPP4C-210ENST00000567040 NRKQ7Z2Y5 1582 aa25.17■■□□□ 1.62
PPP4C-210ENST00000567040 EVA1CP58658 441 aa25.13■■□□□ 1.61
PPP4C-210ENST00000567040 ROCK2O75116 1388 aaKnown RBP25.13■■□□□ 1.61
PPP4C-210ENST00000567040 THSD7AQ9UPZ6 1657 aa25.13■■□□□ 1.61
PPP4C-210ENST00000567040 CABP1Q9NZU7 370 aa25.12■■□□□ 1.61
PPP4C-210ENST00000567040 RGPD1P0DJD0 1748 aa25.11■■□□□ 1.61
PPP4C-210ENST00000567040 SPATA31A1Q5TZJ5 1347 aa25.1■■□□□ 1.61
PPP4C-210ENST00000567040 NLRP13Q86W25 1043 aa25.08■■□□□ 1.61
PPP4C-210ENST00000567040 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
PPP4C-210ENST00000567040 CAMTA1Q9Y6Y1 1673 aa25.07■■□□□ 1.6
PPP4C-210ENST00000567040 BAG6P46379 1132 aa25.07■■□□□ 1.6
PPP4C-210ENST00000567040 SSH2Q76I76 1423 aa25.06■■□□□ 1.6
PPP4C-210ENST00000567040 USP6P35125 1406 aa25.05■■□□□ 1.6
PPP4C-210ENST00000567040 LMO7Q8WWI1 1683 aa25.05■■□□□ 1.6
PPP4C-210ENST00000567040 NLRP6P59044 892 aa25.05■■□□□ 1.6
PPP4C-210ENST00000567040 LARP1Q6PKG0 1096 aaKnown RBP25.05■■□□□ 1.6
PPP4C-210ENST00000567040 USP19O94966 1318 aa25.05■■□□□ 1.6
PPP4C-210ENST00000567040 TNS1Q9HBL0 1735 aaKnown RBP25.04■■□□□ 1.6
PPP4C-210ENST00000567040 GCP02774 474 aa25.04■■□□□ 1.6
PPP4C-210ENST00000567040 EN1Q05925 392 aaPredicted RBP25.04■■□□□ 1.6
PPP4C-210ENST00000567040 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
PPP4C-210ENST00000567040 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
PPP4C-210ENST00000567040 PSDA5PKW4 1024 aaPredicted RBP25.03■■□□□ 1.6
PPP4C-210ENST00000567040 SOX12O15370 315 aa25.03■■□□□ 1.6
PPP4C-210ENST00000567040 CPDO75976 1380 aa25■■□□□ 1.59
PPP4C-210ENST00000567040 RGPD5Q99666 1765 aa25■■□□□ 1.59
PPP4C-210ENST00000567040 TRIM37O94972 964 aa24.99■■□□□ 1.59
PPP4C-210ENST00000567040 PDE3BQ13370 1112 aa24.98■■□□□ 1.59
PPP4C-210ENST00000567040 TCP11L2Q8N4U5 519 aa24.97■■□□□ 1.59
PPP4C-210ENST00000567040 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
PPP4C-210ENST00000567040 SLIT3O75094 1523 aa24.96■■□□□ 1.59
PPP4C-210ENST00000567040 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
PPP4C-210ENST00000567040 TONSLQ96HA7 1378 aa24.95■■□□□ 1.59
PPP4C-210ENST00000567040 CARD11Q9BXL7 1154 aa24.95■■□□□ 1.58
PPP4C-210ENST00000567040 FAM196AQ6ZSG2 479 aa24.94■■□□□ 1.58
PPP4C-210ENST00000567040 TTC21BQ7Z4L5 1316 aa24.93■■□□□ 1.58
PPP4C-210ENST00000567040 EZH2Q15910 746 aaKnown RBP24.93■■□□□ 1.58
PPP4C-210ENST00000567040 BARGINQ6ZT62 677 aa24.93■■□□□ 1.58
PPP4C-210ENST00000567040 COL18A1P39060 1754 aa24.92■■□□□ 1.58
PPP4C-210ENST00000567040 MON2Q7Z3U7 1717 aa24.92■■□□□ 1.58
PPP4C-210ENST00000567040 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
PPP4C-210ENST00000567040 APBA3O96018 575 aa24.91■■□□□ 1.58
PPP4C-210ENST00000567040 PARP4Q9UKK3 1724 aaKnown RBP24.91■■□□□ 1.58
PPP4C-210ENST00000567040 CRB1P82279 1406 aa24.9■■□□□ 1.58
PPP4C-210ENST00000567040 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
PPP4C-210ENST00000567040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.9■■□□□ 1.58
PPP4C-210ENST00000567040 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
PPP4C-210ENST00000567040 WNK3Q9BYP7 1800 aa24.89■■□□□ 1.58
PPP4C-210ENST00000567040 R3HDM1Q15032 1099 aaKnown RBP24.89■■□□□ 1.58
PPP4C-210ENST00000567040 ZNF692Q9BU19 519 aaPredicted RBP24.88■■□□□ 1.57
PPP4C-210ENST00000567040 AATKQ6ZMQ8 1374 aa24.88■■□□□ 1.57
PPP4C-210ENST00000567040 CPSF1Q10570 1443 aaKnown RBP24.86■■□□□ 1.57
PPP4C-210ENST00000567040 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
PPP4C-210ENST00000567040 CSB-PGBD3P0DP91 1061 aa24.86■■□□□ 1.57
PPP4C-210ENST00000567040 AXIN2Q9Y2T1 843 aa24.86■■□□□ 1.57
PPP4C-210ENST00000567040 THRAP3Q9Y2W1 955 aaKnown RBP24.86■■□□□ 1.57
PPP4C-210ENST00000567040 TTC21AQ8NDW8 1320 aa24.85■■□□□ 1.57
PPP4C-210ENST00000567040 LRP5O75197 1615 aa24.84■■□□□ 1.57
PPP4C-210ENST00000567040 DISP2A7MBM2 1401 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms