RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 DESI1Q6ICB0 168 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 SAMD7Q7Z3H4 446 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
KARS-208ENST00000566772 PUS10Q3MIT2 529 aaKnown RBP9.32□□□□□ -0.92
KARS-208ENST00000566772 CRTC2Q53ET0 693 aaPredicted RBP9.32□□□□□ -0.92
KARS-208ENST00000566772 MORN1Q5T089 497 aa9.32□□□□□ -0.92
KARS-208ENST00000566772 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
KARS-208ENST00000566772 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
KARS-208ENST00000566772 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
KARS-208ENST00000566772 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
KARS-208ENST00000566772 FAM98CQ17RN3 349 aaKnown RBP9.31□□□□□ -0.92
KARS-208ENST00000566772 DNAJC14Q6Y2X3 702 aaPredicted RBP9.31□□□□□ -0.92
KARS-208ENST00000566772 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
KARS-208ENST00000566772 FAM196BA6NMK8 535 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L21D6R901 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 RNF40O75150 1001 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
KARS-208ENST00000566772 Q3C1V9 767 aa9.29□□□□□ -0.92
KARS-208ENST00000566772 NOM1Q5C9Z4 860 aaKnown RBP9.29□□□□□ -0.92
KARS-208ENST00000566772 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
KARS-208ENST00000566772 IGSF5Q9NSI5 407 aa9.29□□□□□ -0.92
KARS-208ENST00000566772 USP35Q9P2H5 1018 aa9.29□□□□□ -0.92
KARS-208ENST00000566772 SOWAHDA6NJG2 315 aa9.28□□□□□ -0.92
KARS-208ENST00000566772 RASA1P20936 1047 aa9.28□□□□□ -0.92
KARS-208ENST00000566772 PTK7Q13308 1070 aa9.28□□□□□ -0.92
KARS-208ENST00000566772 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
KARS-208ENST00000566772 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
KARS-208ENST00000566772 KIAA1522Q9P206 1035 aaPredicted RBP9.28□□□□□ -0.92
KARS-208ENST00000566772 CLP1Q92989 425 aaKnown RBP9.27□□□□□ -0.93
KARS-208ENST00000566772 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
KARS-208ENST00000566772 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
KARS-208ENST00000566772 SERPINB4P48594 390 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 NCOA4Q13772 614 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 MAP10Q9P2G4 905 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 CEP126Q9P2H0 1117 aa9.26□□□□□ -0.93
KARS-208ENST00000566772 ERCC3P19447 782 aa9.25□□□□□ -0.93
KARS-208ENST00000566772 SCNN1AP37088 669 aa9.25□□□□□ -0.93
KARS-208ENST00000566772 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
KARS-208ENST00000566772 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
KARS-208ENST00000566772 ACTN4O43707 911 aaKnown RBP9.24□□□□□ -0.93
KARS-208ENST00000566772 ATP2B4P23634 1241 aa9.24□□□□□ -0.93
KARS-208ENST00000566772 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
KARS-208ENST00000566772 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
KARS-208ENST00000566772 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
KARS-208ENST00000566772 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
KARS-208ENST00000566772 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
KARS-208ENST00000566772 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
KARS-208ENST00000566772 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
KARS-208ENST00000566772 ZNF16P17020 682 aaPredicted RBP9.23□□□□□ -0.93
KARS-208ENST00000566772 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
KARS-208ENST00000566772 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
KARS-208ENST00000566772 RNF135Q8IUD6 432 aa9.23□□□□□ -0.93
KARS-208ENST00000566772 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
KARS-208ENST00000566772 ZC3H4Q9UPT8 1303 aaKnown RBP9.23□□□□□ -0.93
KARS-208ENST00000566772 DPYDQ12882 1025 aa9.22□□□□□ -0.93
KARS-208ENST00000566772 BRICD5Q6PL45 260 aa9.22□□□□□ -0.93
KARS-208ENST00000566772 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
KARS-208ENST00000566772 BCL2L13Q9BXK5 485 aa9.22□□□□□ -0.93
KARS-208ENST00000566772 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
KARS-208ENST00000566772 LAPTM4BQ86VI4 370 aa9.21□□□□□ -0.94
KARS-208ENST00000566772 BIN2Q9UBW5 565 aaPredicted RBP9.21□□□□□ -0.94
KARS-208ENST00000566772 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
KARS-208ENST00000566772 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
KARS-208ENST00000566772 CTHP32929 405 aa9.2□□□□□ -0.94
KARS-208ENST00000566772 TSGA10IPQ3SY00 556 aa9.2□□□□□ -0.94
KARS-208ENST00000566772 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
KARS-208ENST00000566772 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
KARS-208ENST00000566772 SNPHO15079 494 aa9.19□□□□□ -0.94
KARS-208ENST00000566772 LZTS3O60299 673 aaPredicted RBP9.19□□□□□ -0.94
KARS-208ENST00000566772 CLDN10P78369 228 aa9.19□□□□□ -0.94
KARS-208ENST00000566772 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
KARS-208ENST00000566772 ZNF594Q96JF6 807 aaPredicted RBP9.19□□□□□ -0.94
KARS-208ENST00000566772 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
KARS-208ENST00000566772 ST18O60284 1047 aa9.18□□□□□ -0.94
KARS-208ENST00000566772 JUNDP17535 347 aa9.18□□□□□ -0.94
KARS-208ENST00000566772 PTK2Q05397 1052 aa9.18□□□□□ -0.94
KARS-208ENST00000566772 PTPRNQ16849 979 aa9.18□□□□□ -0.94
KARS-208ENST00000566772 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
KARS-208ENST00000566772 ANKRD33BA6NCL7 494 aa9.17□□□□□ -0.94
KARS-208ENST00000566772 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
KARS-208ENST00000566772 EML3Q32P44 896 aa9.17□□□□□ -0.94
KARS-208ENST00000566772 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
KARS-208ENST00000566772 DNAAF2Q9NVR5 837 aaKnown RBP9.17□□□□□ -0.94
KARS-208ENST00000566772 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
KARS-208ENST00000566772 GPSM3Q9Y4H4 160 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms