RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 FAM83GA6ND36 823 aa24.1■■□□□ 1.45
TSR3-202ENST00000566296 ATP7BP35670 1465 aa24.09■■□□□ 1.45
TSR3-202ENST00000566296 CRYBG1Q9Y4K1 1723 aa24.09■■□□□ 1.45
TSR3-202ENST00000566296 KRT27Q7Z3Y8 459 aa24.08■■□□□ 1.45
TSR3-202ENST00000566296 ONECUT3O60422 494 aaPredicted RBP24.07■■□□□ 1.44
TSR3-202ENST00000566296 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
TSR3-202ENST00000566296 BTG4Q9NY30 223 aa24.07■■□□□ 1.44
TSR3-202ENST00000566296 KIAA1210Q9ULL0 1709 aa24.05■■□□□ 1.44
TSR3-202ENST00000566296 FAM98CQ17RN3 349 aaKnown RBP24.03■■□□□ 1.44
TSR3-202ENST00000566296 DEFB132Q7Z7B7 95 aa24.03■■□□□ 1.44
TSR3-202ENST00000566296 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
TSR3-202ENST00000566296 PRDM11Q9NQV5 511 aa24.02■■□□□ 1.44
TSR3-202ENST00000566296 TOPAZ1Q8N9V7 1692 aa24.02■■□□□ 1.44
TSR3-202ENST00000566296 PHRF1Q9P1Y6 1649 aaKnown RBP24.01■■□□□ 1.43
TSR3-202ENST00000566296 SRCAPQ6ZRS2 3230 aa23.99■■□□□ 1.43
TSR3-202ENST00000566296 CDK19Q9BWU1 502 aa23.98■■□□□ 1.43
TSR3-202ENST00000566296 SPATA31A5Q5VU36 1347 aa23.98■■□□□ 1.43
TSR3-202ENST00000566296 SPATA31A7Q8IWB4 1347 aa23.98■■□□□ 1.43
TSR3-202ENST00000566296 BAG6P46379 1132 aa23.97■■□□□ 1.43
TSR3-202ENST00000566296 RGPD1P0DJD0 1748 aa23.96■■□□□ 1.43
TSR3-202ENST00000566296 THSD7AQ9UPZ6 1657 aa23.96■■□□□ 1.43
TSR3-202ENST00000566296 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
TSR3-202ENST00000566296 POLR3AO14802 1390 aaPredicted RBP23.95■■□□□ 1.42
TSR3-202ENST00000566296 CCDC61Q9Y6R9 512 aa23.95■■□□□ 1.42
TSR3-202ENST00000566296 ACEP12821 1306 aa23.93■■□□□ 1.42
TSR3-202ENST00000566296 CHRNA2Q15822 529 aa23.91■■□□□ 1.42
TSR3-202ENST00000566296 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
TSR3-202ENST00000566296 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
TSR3-202ENST00000566296 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
TSR3-202ENST00000566296 NBPF8Q3BBV2 869 aa23.9■■□□□ 1.42
TSR3-202ENST00000566296 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
TSR3-202ENST00000566296 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.42
TSR3-202ENST00000566296 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.41
TSR3-202ENST00000566296 CENPJQ9HC77 1338 aaPredicted RBP23.88■■□□□ 1.41
TSR3-202ENST00000566296 SRPK2P78362 688 aaKnown RBP23.88■■□□□ 1.41
TSR3-202ENST00000566296 NBPF1Q3BBV0 1214 aa23.88■■□□□ 1.41
TSR3-202ENST00000566296 QRICH2Q9H0J4 1663 aa23.88■■□□□ 1.41
TSR3-202ENST00000566296 LRP5O75197 1615 aa23.88■■□□□ 1.41
TSR3-202ENST00000566296 TNS1Q9HBL0 1735 aaKnown RBP23.87■■□□□ 1.41
TSR3-202ENST00000566296 PPIP5K1Q6PFW1 1433 aa23.86■■□□□ 1.41
TSR3-202ENST00000566296 ABTB2Q8N961 1025 aa23.86■■□□□ 1.41
TSR3-202ENST00000566296 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
TSR3-202ENST00000566296 FAM182BQ5T319 152 aa23.85■■□□□ 1.41
TSR3-202ENST00000566296 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
TSR3-202ENST00000566296 EVA1CP58658 441 aa23.84■■□□□ 1.41
TSR3-202ENST00000566296 USP19O94966 1318 aa23.84■■□□□ 1.41
TSR3-202ENST00000566296 EN1Q05925 392 aaPredicted RBP23.83■■□□□ 1.41
TSR3-202ENST00000566296 CPDO75976 1380 aa23.82■■□□□ 1.4
TSR3-202ENST00000566296 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
TSR3-202ENST00000566296 LMO7Q8WWI1 1683 aa23.82■■□□□ 1.4
TSR3-202ENST00000566296 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
TSR3-202ENST00000566296 PSDA5PKW4 1024 aaPredicted RBP23.81■■□□□ 1.4
TSR3-202ENST00000566296 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
TSR3-202ENST00000566296 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
TSR3-202ENST00000566296 CAMTA1Q9Y6Y1 1673 aa23.8■■□□□ 1.4
TSR3-202ENST00000566296 FAM196AQ6ZSG2 479 aa23.8■■□□□ 1.4
TSR3-202ENST00000566296 BARGINQ6ZT62 677 aa23.79■■□□□ 1.4
TSR3-202ENST00000566296 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
TSR3-202ENST00000566296 TCP11L2Q8N4U5 519 aa23.77■■□□□ 1.4
TSR3-202ENST00000566296 USP6P35125 1406 aa23.76■■□□□ 1.39
TSR3-202ENST00000566296 TRIM37O94972 964 aa23.76■■□□□ 1.39
TSR3-202ENST00000566296 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
TSR3-202ENST00000566296 TRPM1Q7Z4N2 1603 aa23.76■■□□□ 1.39
TSR3-202ENST00000566296 GCP02774 474 aa23.75■■□□□ 1.39
TSR3-202ENST00000566296 L3MBTL2Q969R5 705 aa23.74■■□□□ 1.39
TSR3-202ENST00000566296 PARD3Q8TEW0 1356 aa23.74■■□□□ 1.39
TSR3-202ENST00000566296 COL5A2P05997 1499 aaPredicted RBP23.74■■□□□ 1.39
TSR3-202ENST00000566296 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
TSR3-202ENST00000566296 THRAP3Q9Y2W1 955 aaKnown RBP23.73■■□□□ 1.39
TSR3-202ENST00000566296 EVC2Q86UK5 1308 aa23.73■■□□□ 1.39
TSR3-202ENST00000566296 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
TSR3-202ENST00000566296 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
TSR3-202ENST00000566296 SLIT3O75094 1523 aa23.72■■□□□ 1.39
TSR3-202ENST00000566296 PARP4Q9UKK3 1724 aaKnown RBP23.72■■□□□ 1.39
TSR3-202ENST00000566296 R3HDM1Q15032 1099 aaKnown RBP23.71■■□□□ 1.39
TSR3-202ENST00000566296 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
TSR3-202ENST00000566296 APBA3O96018 575 aa23.7■■□□□ 1.38
TSR3-202ENST00000566296 NLRP6P59044 892 aa23.7■■□□□ 1.38
TSR3-202ENST00000566296 PIK3C2AO00443 1686 aa23.7■■□□□ 1.38
TSR3-202ENST00000566296 CRB1P82279 1406 aa23.69■■□□□ 1.38
TSR3-202ENST00000566296 CAMKK2Q96RR4 588 aa23.69■■□□□ 1.38
TSR3-202ENST00000566296 RREB1Q92766 1687 aa23.69■■□□□ 1.38
TSR3-202ENST00000566296 AATKQ6ZMQ8 1374 aa23.66■■□□□ 1.38
TSR3-202ENST00000566296 AKAP12Q02952 1782 aa23.65■■□□□ 1.38
TSR3-202ENST00000566296 C11orf95C9JLR9 678 aaPredicted RBP23.65■■□□□ 1.38
TSR3-202ENST00000566296 SIN3AQ96ST3 1273 aa23.65■■□□□ 1.38
TSR3-202ENST00000566296 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.38
TSR3-202ENST00000566296 LRRC37A3O60309 1634 aa23.64■■□□□ 1.38
TSR3-202ENST00000566296 NEUROD1Q13562 356 aa23.64■■□□□ 1.37
TSR3-202ENST00000566296 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
TSR3-202ENST00000566296 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
TSR3-202ENST00000566296 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
TSR3-202ENST00000566296 CPSF1Q10570 1443 aaKnown RBP23.62■■□□□ 1.37
TSR3-202ENST00000566296 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
TSR3-202ENST00000566296 TOM1L2Q6ZVM7 507 aa23.62■■□□□ 1.37
TSR3-202ENST00000566296 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
TSR3-202ENST00000566296 COL18A1P39060 1754 aa23.62■■□□□ 1.37
TSR3-202ENST00000566296 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
TSR3-202ENST00000566296 NBPF14Q5TI25 921 aa23.6■■□□□ 1.37
TSR3-202ENST00000566296 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms