RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 USP21Q9UK80 565 aa24.95■■□□□ 1.58
MSLN-206ENST00000566269 ATAD2Q6PL18 1390 aa24.94■■□□□ 1.58
MSLN-206ENST00000566269 USP47Q96K76 1375 aa24.93■■□□□ 1.58
MSLN-206ENST00000566269 ST20-MTHFSA0A0A6YYL1 179 aa24.92■■□□□ 1.58
MSLN-206ENST00000566269 RXRBP28702 533 aa24.92■■□□□ 1.58
MSLN-206ENST00000566269 FNBP4Q8N3X1 1017 aaPredicted RBP24.92■■□□□ 1.58
MSLN-206ENST00000566269 QTRT2Q9H974 415 aaKnown RBP24.92■■□□□ 1.58
MSLN-206ENST00000566269 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
MSLN-206ENST00000566269 NUTM2GQ5VZR2 741 aa24.91■■□□□ 1.58
MSLN-206ENST00000566269 USP6P35125 1406 aa24.9■■□□□ 1.58
MSLN-206ENST00000566269 PLCH1Q4KWH8 1693 aa24.89■■□□□ 1.58
MSLN-206ENST00000566269 PHRF1Q9P1Y6 1649 aaKnown RBP24.88■■□□□ 1.57
MSLN-206ENST00000566269 ABTB2Q8N961 1025 aa24.88■■□□□ 1.57
MSLN-206ENST00000566269 BCL9LQ86UU0 1499 aa24.88■■□□□ 1.57
MSLN-206ENST00000566269 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
MSLN-206ENST00000566269 SLIT2O94813 1529 aa24.87■■□□□ 1.57
MSLN-206ENST00000566269 TESK2Q96S53 571 aa24.87■■□□□ 1.57
MSLN-206ENST00000566269 TRPC5Q9UL62 973 aaPredicted RBP24.87■■□□□ 1.57
MSLN-206ENST00000566269 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.86■■□□□ 1.57
MSLN-206ENST00000566269 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
MSLN-206ENST00000566269 RBM6P78332 1123 aaKnown RBP24.86■■□□□ 1.57
MSLN-206ENST00000566269 ATRNO75882 1429 aa24.86■■□□□ 1.57
MSLN-206ENST00000566269 TMC1Q8TDI8 760 aa24.84■■□□□ 1.57
MSLN-206ENST00000566269 NWD2Q9ULI1 1742 aa24.83■■□□□ 1.57
MSLN-206ENST00000566269 CDK12Q9NYV4 1490 aaPredicted RBP24.83■■□□□ 1.56
MSLN-206ENST00000566269 UNC5CLQ8IV45 518 aa24.82■■□□□ 1.56
MSLN-206ENST00000566269 COL14A1Q05707 1796 aaKnown RBP24.82■■□□□ 1.56
MSLN-206ENST00000566269 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
MSLN-206ENST00000566269 NRKQ7Z2Y5 1582 aa24.81■■□□□ 1.56
MSLN-206ENST00000566269 RGS12O14924 1447 aa24.81■■□□□ 1.56
MSLN-206ENST00000566269 CPSF1Q10570 1443 aaKnown RBP24.81■■□□□ 1.56
MSLN-206ENST00000566269 FAM83GA6ND36 823 aa24.81■■□□□ 1.56
MSLN-206ENST00000566269 SLC24A1O60721 1099 aa24.81■■□□□ 1.56
MSLN-206ENST00000566269 ZNF692Q9BU19 519 aaPredicted RBP24.81■■□□□ 1.56
MSLN-206ENST00000566269 MON2Q7Z3U7 1717 aa24.81■■□□□ 1.56
MSLN-206ENST00000566269 SSH2Q76I76 1423 aa24.8■■□□□ 1.56
MSLN-206ENST00000566269 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
MSLN-206ENST00000566269 PIK3C2AO00443 1686 aa24.8■■□□□ 1.56
MSLN-206ENST00000566269 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
MSLN-206ENST00000566269 USP19O94966 1318 aa24.79■■□□□ 1.56
MSLN-206ENST00000566269 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
MSLN-206ENST00000566269 TMF1P82094 1093 aa24.78■■□□□ 1.56
MSLN-206ENST00000566269 TTC21BQ7Z4L5 1316 aa24.78■■□□□ 1.56
MSLN-206ENST00000566269 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
MSLN-206ENST00000566269 NLRP6P59044 892 aa24.77■■□□□ 1.56
MSLN-206ENST00000566269 ZC3H6P61129 1189 aaKnown RBP24.77■■□□□ 1.56
MSLN-206ENST00000566269 PUS7Q96PZ0 661 aaKnown RBP24.77■■□□□ 1.56
MSLN-206ENST00000566269 SLC12A5Q9H2X9 1139 aa24.77■■□□□ 1.56
MSLN-206ENST00000566269 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
MSLN-206ENST00000566269 NRAPQ86VF7 1730 aa24.77■■□□□ 1.56
MSLN-206ENST00000566269 HDGFL2Q7Z4V5 671 aaPredicted RBP24.76■■□□□ 1.55
MSLN-206ENST00000566269 GJD4Q96KN9 370 aaPredicted RBP24.75■■□□□ 1.55
MSLN-206ENST00000566269 CCDC9Q9Y3X0 531 aaKnown RBP24.75■■□□□ 1.55
MSLN-206ENST00000566269 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
MSLN-206ENST00000566269 TERF2IPQ9NYB0 399 aa24.74■■□□□ 1.55
MSLN-206ENST00000566269 TTC21AQ8NDW8 1320 aa24.74■■□□□ 1.55
MSLN-206ENST00000566269 NINLQ9Y2I6 1382 aa24.74■■□□□ 1.55
MSLN-206ENST00000566269 GLI3P10071 1580 aa24.73■■□□□ 1.55
MSLN-206ENST00000566269 A0A1W2PP64 1363 aa24.73■■□□□ 1.55
MSLN-206ENST00000566269 SLIT3O75094 1523 aa24.72■■□□□ 1.55
MSLN-206ENST00000566269 VPS72Q15906 364 aa24.72■■□□□ 1.55
MSLN-206ENST00000566269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.72■■□□□ 1.55
MSLN-206ENST00000566269 GCP02774 474 aa24.71■■□□□ 1.55
MSLN-206ENST00000566269 ZBTB7CA1YPR0 619 aa24.7■■□□□ 1.54
MSLN-206ENST00000566269 EDC4Q6P2E9 1401 aaKnown RBP24.69■■□□□ 1.54
MSLN-206ENST00000566269 CPDO75976 1380 aa24.69■■□□□ 1.54
MSLN-206ENST00000566269 CDCA8Q53HL2 280 aa24.69■■□□□ 1.54
MSLN-206ENST00000566269 SOX12O15370 315 aa24.67■■□□□ 1.54
MSLN-206ENST00000566269 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
MSLN-206ENST00000566269 NME9Q86XW9 330 aa24.66■■□□□ 1.54
MSLN-206ENST00000566269 STRN4Q9NRL3 753 aa24.66■■□□□ 1.54
MSLN-206ENST00000566269 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
MSLN-206ENST00000566269 HSPA5P11021 654 aaKnown RBP24.64■■□□□ 1.54
MSLN-206ENST00000566269 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
MSLN-206ENST00000566269 ANKRD36BQ8N2N9 1353 aa24.64■■□□□ 1.53
MSLN-206ENST00000566269 USP54Q70EL1 1684 aa24.63■■□□□ 1.53
MSLN-206ENST00000566269 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
MSLN-206ENST00000566269 KCNH5Q8NCM2 988 aa24.62■■□□□ 1.53
MSLN-206ENST00000566269 MYOM1P52179 1685 aa24.62■■□□□ 1.53
MSLN-206ENST00000566269 A0A0G2JS52 829 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 MYT1Q01538 1121 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 USP31Q70CQ4 1352 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 NFAT5O94916 1531 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
MSLN-206ENST00000566269 EP400Q96L91 3159 aa24.6■■□□□ 1.53
MSLN-206ENST00000566269 EVA1CP58658 441 aa24.6■■□□□ 1.53
MSLN-206ENST00000566269 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
MSLN-206ENST00000566269 FAM98CQ17RN3 349 aaKnown RBP24.59■■□□□ 1.53
MSLN-206ENST00000566269 SEPT12Q8IYM1 358 aa24.59■■□□□ 1.53
MSLN-206ENST00000566269 AATKQ6ZMQ8 1374 aa24.58■■□□□ 1.53
MSLN-206ENST00000566269 BRWD3Q6RI45 1802 aa24.58■■□□□ 1.53
MSLN-206ENST00000566269 COL5A2P05997 1499 aaPredicted RBP24.58■■□□□ 1.52
MSLN-206ENST00000566269 OVOS2A0A0J9YW53 1432 aa24.57■■□□□ 1.52
MSLN-206ENST00000566269 OVOS2Q6IE36 1432 aa24.57■■□□□ 1.52
MSLN-206ENST00000566269 UPF1Q92900 1129 aaKnown RBP eCLIP24.56■■□□□ 1.52
MSLN-206ENST00000566269 COL18A1P39060 1754 aa24.55■■□□□ 1.52
MSLN-206ENST00000566269 LARP1Q6PKG0 1096 aaKnown RBP24.55■■□□□ 1.52
MSLN-206ENST00000566269 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
MSLN-206ENST00000566269 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms