RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
NSMCE1-211ENST00000566087 BTG4Q9NY30 223 aa15.27■□□□□ 0.04
NSMCE1-211ENST00000566087 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-211ENST00000566087 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-211ENST00000566087 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
NSMCE1-211ENST00000566087 HIRIP3Q9BW71 556 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-211ENST00000566087 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-211ENST00000566087 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
NSMCE1-211ENST00000566087 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
NSMCE1-211ENST00000566087 ZEB1P37275 1124 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-211ENST00000566087 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
NSMCE1-211ENST00000566087 DLC1Q96QB1 1528 aa15.22■□□□□ 0.03
NSMCE1-211ENST00000566087 R3HDM1Q15032 1099 aaKnown RBP15.22■□□□□ 0.03
NSMCE1-211ENST00000566087 ANKARQ7Z5J8 1434 aa15.22■□□□□ 0.03
NSMCE1-211ENST00000566087 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
NSMCE1-211ENST00000566087 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
NSMCE1-211ENST00000566087 PRR36Q9H6K5 1346 aa15.21■□□□□ 0.03
NSMCE1-211ENST00000566087 ADGRB2O60241 1585 aa15.21■□□□□ 0.03
NSMCE1-211ENST00000566087 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
NSMCE1-211ENST00000566087 KIAA1210Q9ULL0 1709 aa15.2■□□□□ 0.02
NSMCE1-211ENST00000566087 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
NSMCE1-211ENST00000566087 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
NSMCE1-211ENST00000566087 SPATA31A5Q5VU36 1347 aa15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 SPATA31A7Q8IWB4 1347 aa15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
NSMCE1-211ENST00000566087 EZH2Q15910 746 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-211ENST00000566087 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
NSMCE1-211ENST00000566087 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
NSMCE1-211ENST00000566087 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
NSMCE1-211ENST00000566087 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-211ENST00000566087 CHRNA2Q15822 529 aa15.16■□□□□ 0.02
NSMCE1-211ENST00000566087 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
NSMCE1-211ENST00000566087 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-211ENST00000566087 TRIM37O94972 964 aa15.15■□□□□ 0.02
NSMCE1-211ENST00000566087 STRN4Q9NRL3 753 aa15.15■□□□□ 0.02
NSMCE1-211ENST00000566087 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
NSMCE1-211ENST00000566087 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
NSMCE1-211ENST00000566087 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
NSMCE1-211ENST00000566087 SPATA31A1Q5TZJ5 1347 aa15.14■□□□□ 0.01
NSMCE1-211ENST00000566087 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-211ENST00000566087 NUTM2GQ5VZR2 741 aa15.13■□□□□ 0.01
NSMCE1-211ENST00000566087 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
NSMCE1-211ENST00000566087 PHRF1Q9P1Y6 1649 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-211ENST00000566087 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-211ENST00000566087 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-211ENST00000566087 CAMKK2Q96RR4 588 aa15.12■□□□□ 0.01
NSMCE1-211ENST00000566087 APBA3O96018 575 aa15.11■□□□□ 0.01
NSMCE1-211ENST00000566087 ITSN1Q15811 1721 aa15.1■□□□□ 0.01
NSMCE1-211ENST00000566087 FAM196AQ6ZSG2 479 aa15.1■□□□□ 0.01
NSMCE1-211ENST00000566087 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
NSMCE1-211ENST00000566087 ARHGEF28Q8N1W1 1705 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-211ENST00000566087 ATP7BP35670 1465 aa15.09■□□□□ 0.01
NSMCE1-211ENST00000566087 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-211ENST00000566087 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
NSMCE1-211ENST00000566087 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
NSMCE1-211ENST00000566087 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0
NSMCE1-211ENST00000566087 RREB1Q92766 1687 aa15.08■□□□□ 0
NSMCE1-211ENST00000566087 EVC2Q86UK5 1308 aa15.08■□□□□ 0
NSMCE1-211ENST00000566087 NUP188Q5SRE5 1749 aa15.08■□□□□ 0
NSMCE1-211ENST00000566087 EVA1CP58658 441 aa15.07■□□□□ 0
NSMCE1-211ENST00000566087 PDE3BQ13370 1112 aa15.06■□□□□ 0
NSMCE1-211ENST00000566087 NBPF8Q3BBV2 869 aa15.06■□□□□ 0
NSMCE1-211ENST00000566087 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
NSMCE1-211ENST00000566087 SSH2Q76I76 1423 aa15.06■□□□□ 0
NSMCE1-211ENST00000566087 TRPM1Q7Z4N2 1603 aa15.06■□□□□ 0
NSMCE1-211ENST00000566087 NRKQ7Z2Y5 1582 aa15.05■□□□□ -0
NSMCE1-211ENST00000566087 CAMTA1Q9Y6Y1 1673 aa15.05■□□□□ -0
NSMCE1-211ENST00000566087 ACEP12821 1306 aa15.04■□□□□ -0
NSMCE1-211ENST00000566087 TOPAZ1Q8N9V7 1692 aa15.03■□□□□ -0
NSMCE1-211ENST00000566087 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
NSMCE1-211ENST00000566087 BARGINQ6ZT62 677 aa15.03■□□□□ -0
NSMCE1-211ENST00000566087 PLEKHG3A1L390 1219 aa15.02■□□□□ -0
NSMCE1-211ENST00000566087 YY1P25490 414 aa15.02■□□□□ -0
NSMCE1-211ENST00000566087 ABTB2Q8N961 1025 aa15.02■□□□□ -0
NSMCE1-211ENST00000566087 LMO7Q8WWI1 1683 aa15.02□□□□□ -0.01
NSMCE1-211ENST00000566087 POLR3AO14802 1390 aaPredicted RBP15.01□□□□□ -0.01
NSMCE1-211ENST00000566087 NBPF14Q5TI25 921 aa15.01□□□□□ -0.01
NSMCE1-211ENST00000566087 TCP11L2Q8N4U5 519 aa15.01□□□□□ -0.01
NSMCE1-211ENST00000566087 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
NSMCE1-211ENST00000566087 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
NSMCE1-211ENST00000566087 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
NSMCE1-211ENST00000566087 PPP1R1BQ9UD71 204 aaPredicted RBP14.99□□□□□ -0.01
NSMCE1-211ENST00000566087 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-211ENST00000566087 PARP4Q9UKK3 1724 aaKnown RBP14.98□□□□□ -0.01
NSMCE1-211ENST00000566087 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
NSMCE1-211ENST00000566087 CPDO75976 1380 aa14.98□□□□□ -0.01
NSMCE1-211ENST00000566087 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
NSMCE1-211ENST00000566087 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
NSMCE1-211ENST00000566087 COL5A2P05997 1499 aaPredicted RBP14.97□□□□□ -0.01
NSMCE1-211ENST00000566087 SPON1Q9HCB6 807 aa14.97□□□□□ -0.01
NSMCE1-211ENST00000566087 USP19O94966 1318 aa14.96□□□□□ -0.01
NSMCE1-211ENST00000566087 KCNQ2O43526 872 aa14.96□□□□□ -0.01
NSMCE1-211ENST00000566087 GCP02774 474 aa14.96□□□□□ -0.01
NSMCE1-211ENST00000566087 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
NSMCE1-211ENST00000566087 PEAK1Q9H792 1746 aa14.95□□□□□ -0.02
NSMCE1-211ENST00000566087 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
NSMCE1-211ENST00000566087 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms