RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
SMPD3-206ENST00000566009 IQGAP3Q86VI3 1631 aa14.33□□□□□ -0.12
SMPD3-206ENST00000566009 PLSCR1O15162 318 aa14.32□□□□□ -0.12
SMPD3-206ENST00000566009 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
SMPD3-206ENST00000566009 DAPK1P53355 1430 aa14.32□□□□□ -0.12
SMPD3-206ENST00000566009 PRAG1Q86YV5 1406 aa14.31□□□□□ -0.12
SMPD3-206ENST00000566009 RRBP1Q9P2E9 1410 aaKnown RBP14.31□□□□□ -0.12
SMPD3-206ENST00000566009 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
SMPD3-206ENST00000566009 COL14A1Q05707 1796 aaKnown RBP14.29□□□□□ -0.12
SMPD3-206ENST00000566009 SBNO1A3KN83 1393 aa14.29□□□□□ -0.12
SMPD3-206ENST00000566009 E9PCH4 1651 aa14.28□□□□□ -0.12
SMPD3-206ENST00000566009 NAIPQ13075 1403 aa14.28□□□□□ -0.12
SMPD3-206ENST00000566009 PROM2Q8N271 834 aa14.28□□□□□ -0.12
SMPD3-206ENST00000566009 STK32BQ9NY57 414 aa14.27□□□□□ -0.13
SMPD3-206ENST00000566009 SLC15A2Q16348 729 aa14.26□□□□□ -0.13
SMPD3-206ENST00000566009 ZNF526Q8TF50 670 aaPredicted RBP14.26□□□□□ -0.13
SMPD3-206ENST00000566009 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
SMPD3-206ENST00000566009 KIF1AQ12756 1690 aa14.26□□□□□ -0.13
SMPD3-206ENST00000566009 GRIN3BO60391 1043 aa14.25□□□□□ -0.13
SMPD3-206ENST00000566009 BARGINQ6ZT62 677 aa14.25□□□□□ -0.13
SMPD3-206ENST00000566009 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
SMPD3-206ENST00000566009 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
SMPD3-206ENST00000566009 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
SMPD3-206ENST00000566009 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
SMPD3-206ENST00000566009 C11orf95C9JLR9 678 aaPredicted RBP14.23□□□□□ -0.13
SMPD3-206ENST00000566009 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
SMPD3-206ENST00000566009 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
SMPD3-206ENST00000566009 JMYQ8N9B5 988 aa14.23□□□□□ -0.13
SMPD3-206ENST00000566009 RGPD3A6NKT7 1758 aaPredicted RBP14.23□□□□□ -0.13
SMPD3-206ENST00000566009 RGPD4Q7Z3J3 1758 aa14.23□□□□□ -0.13
SMPD3-206ENST00000566009 TECPR2O15040 1411 aa14.23□□□□□ -0.13
SMPD3-206ENST00000566009 YBX3P16989 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMPD3-206ENST00000566009 PRDM11Q9NQV5 511 aa14.22□□□□□ -0.13
SMPD3-206ENST00000566009 KIF3CO14782 793 aa14.21□□□□□ -0.13
SMPD3-206ENST00000566009 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
SMPD3-206ENST00000566009 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
SMPD3-206ENST00000566009 KLRG1Q96E93 195 aa14.2□□□□□ -0.14
SMPD3-206ENST00000566009 NLGN2Q8NFZ4 835 aa14.19□□□□□ -0.14
SMPD3-206ENST00000566009 GOLGB1Q14789 3259 aaKnown RBP14.19□□□□□ -0.14
SMPD3-206ENST00000566009 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
SMPD3-206ENST00000566009 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
SMPD3-206ENST00000566009 ADCY9O60503 1353 aa14.18□□□□□ -0.14
SMPD3-206ENST00000566009 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
SMPD3-206ENST00000566009 FMN2Q9NZ56 1722 aa14.17□□□□□ -0.14
SMPD3-206ENST00000566009 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
SMPD3-206ENST00000566009 TCP11L2Q8N4U5 519 aa14.16□□□□□ -0.14
SMPD3-206ENST00000566009 NRXN1Q9ULB1 1477 aa14.16□□□□□ -0.14
SMPD3-206ENST00000566009 EVA1CP58658 441 aa14.15□□□□□ -0.14
SMPD3-206ENST00000566009 HTRA3P83110 453 aa14.14□□□□□ -0.15
SMPD3-206ENST00000566009 STK26Q9P289 416 aa14.14□□□□□ -0.15
SMPD3-206ENST00000566009 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
SMPD3-206ENST00000566009 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
SMPD3-206ENST00000566009 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
SMPD3-206ENST00000566009 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
SMPD3-206ENST00000566009 PMFBP1Q8TBY8 1022 aa14.13□□□□□ -0.15
SMPD3-206ENST00000566009 RGPD8O14715 1765 aaPredicted RBP14.13□□□□□ -0.15
SMPD3-206ENST00000566009 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
SMPD3-206ENST00000566009 TOMM70O94826 608 aa14.12□□□□□ -0.15
SMPD3-206ENST00000566009 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
SMPD3-206ENST00000566009 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
SMPD3-206ENST00000566009 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
SMPD3-206ENST00000566009 POLD1P28340 1107 aa14.11□□□□□ -0.15
SMPD3-206ENST00000566009 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
SMPD3-206ENST00000566009 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
SMPD3-206ENST00000566009 THRAP3Q9Y2W1 955 aaKnown RBP14.11□□□□□ -0.15
SMPD3-206ENST00000566009 WDR90Q96KV7 1748 aa14.09□□□□□ -0.15
SMPD3-206ENST00000566009 NUP155O75694 1391 aa14.09□□□□□ -0.15
SMPD3-206ENST00000566009 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
SMPD3-206ENST00000566009 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
SMPD3-206ENST00000566009 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
SMPD3-206ENST00000566009 TRPM3Q9HCF6 1732 aaPredicted RBP14.07□□□□□ -0.16
SMPD3-206ENST00000566009 HSPA1AP0DMV8 641 aaKnown RBP14.06□□□□□ -0.16
SMPD3-206ENST00000566009 HSPA1BP0DMV9 641 aaKnown RBP14.06□□□□□ -0.16
SMPD3-206ENST00000566009 PARP4Q9UKK3 1724 aaKnown RBP14.06□□□□□ -0.16
SMPD3-206ENST00000566009 ABCC11Q96J66 1382 aa14.06□□□□□ -0.16
SMPD3-206ENST00000566009 ATP7BP35670 1465 aa14.06□□□□□ -0.16
SMPD3-206ENST00000566009 CRYBG1Q9Y4K1 1723 aa14.05□□□□□ -0.16
SMPD3-206ENST00000566009 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
SMPD3-206ENST00000566009 GPRASP1Q5JY77 1395 aa14.05□□□□□ -0.16
SMPD3-206ENST00000566009 TNS2Q63HR2 1409 aa14.04□□□□□ -0.16
SMPD3-206ENST00000566009 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
SMPD3-206ENST00000566009 DDB1Q16531 1140 aa14.03□□□□□ -0.16
SMPD3-206ENST00000566009 ZNF827Q17R98 1081 aa14.03□□□□□ -0.16
SMPD3-206ENST00000566009 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
SMPD3-206ENST00000566009 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
SMPD3-206ENST00000566009 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
SMPD3-206ENST00000566009 TMEM132EQ6IEE7 984 aa14.01□□□□□ -0.17
SMPD3-206ENST00000566009 MARCH10Q8NA82 808 aaPredicted RBP14.01□□□□□ -0.17
SMPD3-206ENST00000566009 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
SMPD3-206ENST00000566009 BCL9O00512 1426 aa14□□□□□ -0.17
SMPD3-206ENST00000566009 PCNTO95613 3336 aa13.99□□□□□ -0.17
SMPD3-206ENST00000566009 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
SMPD3-206ENST00000566009 KIF1BO60333 1816 aa13.99□□□□□ -0.17
SMPD3-206ENST00000566009 RBM46Q8TBY0 533 aaKnown RBP13.98□□□□□ -0.17
SMPD3-206ENST00000566009 SIRT1Q96EB6 747 aa13.98□□□□□ -0.17
SMPD3-206ENST00000566009 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
SMPD3-206ENST00000566009 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
SMPD3-206ENST00000566009 ARHGEF28Q8N1W1 1705 aaKnown RBP13.96□□□□□ -0.17
SMPD3-206ENST00000566009 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
SMPD3-206ENST00000566009 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms