RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 ST20-MTHFSA0A0A6YYL1 179 aa26.37■■□□□ 1.81
CMTM3-210ENST00000565666 USP47Q96K76 1375 aa26.36■■□□□ 1.81
CMTM3-210ENST00000565666 SOCS7O14512 581 aa26.35■■□□□ 1.81
CMTM3-210ENST00000565666 USP21Q9UK80 565 aa26.35■■□□□ 1.81
CMTM3-210ENST00000565666 CRYBG1Q9Y4K1 1723 aa26.33■■□□□ 1.81
CMTM3-210ENST00000565666 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
CMTM3-210ENST00000565666 QTRT2Q9H974 415 aaKnown RBP26.32■■□□□ 1.8
CMTM3-210ENST00000565666 USP6P35125 1406 aa26.31■■□□□ 1.8
CMTM3-210ENST00000565666 AKAP12Q02952 1782 aa26.31■■□□□ 1.8
CMTM3-210ENST00000565666 SLC24A1O60721 1099 aa26.31■■□□□ 1.8
CMTM3-210ENST00000565666 RXRBP28702 533 aa26.31■■□□□ 1.8
CMTM3-210ENST00000565666 NUTM2GQ5VZR2 741 aa26.31■■□□□ 1.8
CMTM3-210ENST00000565666 BRD4O60885 1362 aaPredicted RBP26.31■■□□□ 1.8
CMTM3-210ENST00000565666 ABTB2Q8N961 1025 aa26.3■■□□□ 1.8
CMTM3-210ENST00000565666 TESK2Q96S53 571 aa26.3■■□□□ 1.8
CMTM3-210ENST00000565666 PHRF1Q9P1Y6 1649 aaKnown RBP26.29■■□□□ 1.8
CMTM3-210ENST00000565666 PLCH1Q4KWH8 1693 aa26.28■■□□□ 1.8
CMTM3-210ENST00000565666 TMC1Q8TDI8 760 aa26.28■■□□□ 1.8
CMTM3-210ENST00000565666 ZNF692Q9BU19 519 aaPredicted RBP26.28■■□□□ 1.8
CMTM3-210ENST00000565666 TRPC5Q9UL62 973 aaPredicted RBP26.27■■□□□ 1.8
CMTM3-210ENST00000565666 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.26■■□□□ 1.79
CMTM3-210ENST00000565666 SLIT2O94813 1529 aa26.25■■□□□ 1.79
CMTM3-210ENST00000565666 BCL9LQ86UU0 1499 aa26.25■■□□□ 1.79
CMTM3-210ENST00000565666 RBM6P78332 1123 aaKnown RBP26.25■■□□□ 1.79
CMTM3-210ENST00000565666 PUS7Q96PZ0 661 aaKnown RBP26.25■■□□□ 1.79
CMTM3-210ENST00000565666 KTN1Q86UP2 1357 aaKnown RBP26.24■■□□□ 1.79
CMTM3-210ENST00000565666 TMF1P82094 1093 aa26.24■■□□□ 1.79
CMTM3-210ENST00000565666 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
CMTM3-210ENST00000565666 NWD2Q9ULI1 1742 aa26.24■■□□□ 1.79
CMTM3-210ENST00000565666 ATRNO75882 1429 aa26.23■■□□□ 1.79
CMTM3-210ENST00000565666 MON2Q7Z3U7 1717 aa26.23■■□□□ 1.79
CMTM3-210ENST00000565666 COL14A1Q05707 1796 aaKnown RBP26.23■■□□□ 1.79
CMTM3-210ENST00000565666 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
CMTM3-210ENST00000565666 UNC5CLQ8IV45 518 aa26.22■■□□□ 1.79
CMTM3-210ENST00000565666 NRKQ7Z2Y5 1582 aa26.21■■□□□ 1.79
CMTM3-210ENST00000565666 FAM83GA6ND36 823 aa26.21■■□□□ 1.79
CMTM3-210ENST00000565666 HDGFL2Q7Z4V5 671 aaPredicted RBP26.21■■□□□ 1.79
CMTM3-210ENST00000565666 SLC12A5Q9H2X9 1139 aa26.21■■□□□ 1.79
CMTM3-210ENST00000565666 CDK12Q9NYV4 1490 aaPredicted RBP26.21■■□□□ 1.79
CMTM3-210ENST00000565666 SSH2Q76I76 1423 aa26.21■■□□□ 1.79
CMTM3-210ENST00000565666 PIK3C2AO00443 1686 aa26.2■■□□□ 1.78
CMTM3-210ENST00000565666 PRDM11Q9NQV5 511 aa26.2■■□□□ 1.78
CMTM3-210ENST00000565666 TTC21BQ7Z4L5 1316 aa26.19■■□□□ 1.78
CMTM3-210ENST00000565666 NLRP6P59044 892 aa26.19■■□□□ 1.78
CMTM3-210ENST00000565666 USP19O94966 1318 aa26.18■■□□□ 1.78
CMTM3-210ENST00000565666 TERF2IPQ9NYB0 399 aa26.18■■□□□ 1.78
CMTM3-210ENST00000565666 NINLQ9Y2I6 1382 aa26.18■■□□□ 1.78
CMTM3-210ENST00000565666 CD163L1Q9NR16 1453 aa26.17■■□□□ 1.78
CMTM3-210ENST00000565666 TTC21AQ8NDW8 1320 aa26.17■■□□□ 1.78
CMTM3-210ENST00000565666 ZC3H6P61129 1189 aaKnown RBP26.17■■□□□ 1.78
CMTM3-210ENST00000565666 KIAA0232Q92628 1395 aa26.17■■□□□ 1.78
CMTM3-210ENST00000565666 CDCA8Q53HL2 280 aa26.16■■□□□ 1.78
CMTM3-210ENST00000565666 BTG4Q9NY30 223 aa26.16■■□□□ 1.78
CMTM3-210ENST00000565666 RGS12O14924 1447 aa26.15■■□□□ 1.78
CMTM3-210ENST00000565666 NRAPQ86VF7 1730 aa26.15■■□□□ 1.78
CMTM3-210ENST00000565666 GJD4Q96KN9 370 aaPredicted RBP26.15■■□□□ 1.78
CMTM3-210ENST00000565666 CCDC9Q9Y3X0 531 aaKnown RBP26.15■■□□□ 1.78
CMTM3-210ENST00000565666 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.78
CMTM3-210ENST00000565666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.14■■□□□ 1.78
CMTM3-210ENST00000565666 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
CMTM3-210ENST00000565666 GCP02774 474 aa26.13■■□□□ 1.77
CMTM3-210ENST00000565666 CHRNA2Q15822 529 aa26.13■■□□□ 1.77
CMTM3-210ENST00000565666 SLIT3O75094 1523 aa26.12■■□□□ 1.77
CMTM3-210ENST00000565666 VPS72Q15906 364 aa26.11■■□□□ 1.77
CMTM3-210ENST00000565666 EDC4Q6P2E9 1401 aaKnown RBP26.11■■□□□ 1.77
CMTM3-210ENST00000565666 GLI3P10071 1580 aa26.1■■□□□ 1.77
CMTM3-210ENST00000565666 CPDO75976 1380 aa26.09■■□□□ 1.77
CMTM3-210ENST00000565666 ZBTB7CA1YPR0 619 aa26.09■■□□□ 1.77
CMTM3-210ENST00000565666 HSPA5P11021 654 aaKnown RBP26.09■■□□□ 1.77
CMTM3-210ENST00000565666 NME9Q86XW9 330 aa26.06■■□□□ 1.76
CMTM3-210ENST00000565666 ANKRD36BQ8N2N9 1353 aa26.06■■□□□ 1.76
CMTM3-210ENST00000565666 SOX12O15370 315 aa26.05■■□□□ 1.76
CMTM3-210ENST00000565666 KCNH5Q8NCM2 988 aa26.05■■□□□ 1.76
CMTM3-210ENST00000565666 STRN4Q9NRL3 753 aa26.05■■□□□ 1.76
CMTM3-210ENST00000565666 USP54Q70EL1 1684 aa26.04■■□□□ 1.76
CMTM3-210ENST00000565666 LMO7Q8WWI1 1683 aa26.04■■□□□ 1.76
CMTM3-210ENST00000565666 ZRANB1Q9UGI0 708 aa26.04■■□□□ 1.76
CMTM3-210ENST00000565666 MYOM1P52179 1685 aa26.03■■□□□ 1.76
CMTM3-210ENST00000565666 EVA1CP58658 441 aa26.03■■□□□ 1.76
CMTM3-210ENST00000565666 POLR3GLQ9BT43 218 aa26.03■■□□□ 1.76
CMTM3-210ENST00000565666 USP31Q70CQ4 1352 aa26.03■■□□□ 1.76
CMTM3-210ENST00000565666 CAMTA1Q9Y6Y1 1673 aa26.01■■□□□ 1.75
CMTM3-210ENST00000565666 A0A0G2JS52 829 aa25.99■■□□□ 1.75
CMTM3-210ENST00000565666 MYT1Q01538 1121 aa25.99■■□□□ 1.75
CMTM3-210ENST00000565666 NFAT5O94916 1531 aa25.98■■□□□ 1.75
CMTM3-210ENST00000565666 AATKQ6ZMQ8 1374 aa25.98■■□□□ 1.75
CMTM3-210ENST00000565666 SPATA31A5Q5VU36 1347 aa25.98■■□□□ 1.75
CMTM3-210ENST00000565666 SPATA31A7Q8IWB4 1347 aa25.98■■□□□ 1.75
CMTM3-210ENST00000565666 FAM98CQ17RN3 349 aaKnown RBP25.96■■□□□ 1.75
CMTM3-210ENST00000565666 SEPT12Q8IYM1 358 aa25.96■■□□□ 1.75
CMTM3-210ENST00000565666 OVOS2A0A0J9YW53 1432 aa25.96■■□□□ 1.75
CMTM3-210ENST00000565666 OVOS2Q6IE36 1432 aa25.96■■□□□ 1.75
CMTM3-210ENST00000565666 COL18A1P39060 1754 aa25.95■■□□□ 1.75
CMTM3-210ENST00000565666 ARHGEF25Q86VW2 580 aa25.95■■□□□ 1.74
CMTM3-210ENST00000565666 COL5A2P05997 1499 aaPredicted RBP25.95■■□□□ 1.74
CMTM3-210ENST00000565666 BRWD3Q6RI45 1802 aa25.95■■□□□ 1.74
CMTM3-210ENST00000565666 SPATA31A1Q5TZJ5 1347 aa25.94■■□□□ 1.74
CMTM3-210ENST00000565666 COG3Q96JB2 828 aa25.94■■□□□ 1.74
CMTM3-210ENST00000565666 LTN1O94822 1766 aa25.93■■□□□ 1.74
CMTM3-210ENST00000565666 LARP1Q6PKG0 1096 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms