RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 VPS72Q15906 364 aa28.6■■■□□ 2.17
CLN6-206ENST00000565471 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
CLN6-206ENST00000565471 FAM83GA6ND36 823 aa28.59■■■□□ 2.17
CLN6-206ENST00000565471 PAK3O75914 559 aaPredicted RBP28.59■■■□□ 2.17
CLN6-206ENST00000565471 QRICH2Q9H0J4 1663 aa28.58■■■□□ 2.17
CLN6-206ENST00000565471 NEUROD1Q13562 356 aa28.58■■■□□ 2.17
CLN6-206ENST00000565471 ACEP12821 1306 aa28.57■■■□□ 2.16
CLN6-206ENST00000565471 COL14A1Q05707 1796 aaKnown RBP28.57■■■□□ 2.16
CLN6-206ENST00000565471 NRAPQ86VF7 1730 aa28.56■■■□□ 2.16
CLN6-206ENST00000565471 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
CLN6-206ENST00000565471 NBPF8Q3BBV2 869 aa28.54■■■□□ 2.16
CLN6-206ENST00000565471 PPIP5K1Q6PFW1 1433 aa28.52■■■□□ 2.16
CLN6-206ENST00000565471 ROCK2O75116 1388 aaKnown RBP28.51■■■□□ 2.16
CLN6-206ENST00000565471 BTG4Q9NY30 223 aa28.51■■■□□ 2.15
CLN6-206ENST00000565471 ONECUT3O60422 494 aaPredicted RBP28.5■■■□□ 2.15
CLN6-206ENST00000565471 CCDC9Q9Y3X0 531 aaKnown RBP28.5■■■□□ 2.15
CLN6-206ENST00000565471 PHRF1Q9P1Y6 1649 aaKnown RBP28.5■■■□□ 2.15
CLN6-206ENST00000565471 CABP2Q9NPB3 220 aa28.49■■■□□ 2.15
CLN6-206ENST00000565471 CCDC125Q86Z20 511 aa28.48■■■□□ 2.15
CLN6-206ENST00000565471 SEPT12Q8IYM1 358 aa28.47■■■□□ 2.15
CLN6-206ENST00000565471 PRDM11Q9NQV5 511 aa28.47■■■□□ 2.15
CLN6-206ENST00000565471 BRWD3Q6RI45 1802 aa28.47■■■□□ 2.15
CLN6-206ENST00000565471 BRD4O60885 1362 aaPredicted RBP28.46■■■□□ 2.15
CLN6-206ENST00000565471 EVC2Q86UK5 1308 aa28.44■■■□□ 2.14
CLN6-206ENST00000565471 KIAA0232Q92628 1395 aa28.44■■■□□ 2.14
CLN6-206ENST00000565471 NUTM2GQ5VZR2 741 aa28.42■■■□□ 2.14
CLN6-206ENST00000565471 ABTB2Q8N961 1025 aa28.42■■■□□ 2.14
CLN6-206ENST00000565471 NRKQ7Z2Y5 1582 aa28.41■■■□□ 2.14
CLN6-206ENST00000565471 USP19O94966 1318 aa28.41■■■□□ 2.14
CLN6-206ENST00000565471 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
CLN6-206ENST00000565471 CABP1Q9NZU7 370 aa28.4■■■□□ 2.14
CLN6-206ENST00000565471 SPATA31A5Q5VU36 1347 aa28.4■■■□□ 2.14
CLN6-206ENST00000565471 SPATA31A7Q8IWB4 1347 aa28.4■■■□□ 2.14
CLN6-206ENST00000565471 EP400Q96L91 3159 aa28.39■■■□□ 2.14
CLN6-206ENST00000565471 USP6P35125 1406 aa28.39■■■□□ 2.14
CLN6-206ENST00000565471 BLMP54132 1417 aaPredicted RBP28.38■■■□□ 2.13
CLN6-206ENST00000565471 KRT27Q7Z3Y8 459 aa28.38■■■□□ 2.13
CLN6-206ENST00000565471 TONSLQ96HA7 1378 aa28.37■■■□□ 2.13
CLN6-206ENST00000565471 ZC3H6P61129 1189 aaKnown RBP28.37■■■□□ 2.13
CLN6-206ENST00000565471 FAM98CQ17RN3 349 aaKnown RBP28.37■■■□□ 2.13
CLN6-206ENST00000565471 NLRP13Q86W25 1043 aa28.37■■■□□ 2.13
CLN6-206ENST00000565471 CPDO75976 1380 aa28.37■■■□□ 2.13
CLN6-206ENST00000565471 CHRNA2Q15822 529 aa28.36■■■□□ 2.13
CLN6-206ENST00000565471 SBNO2Q9Y2G9 1366 aa28.35■■■□□ 2.13
CLN6-206ENST00000565471 A0A0G2JS52 829 aa28.34■■■□□ 2.13
CLN6-206ENST00000565471 MYT1Q01538 1121 aa28.34■■■□□ 2.13
CLN6-206ENST00000565471 SSH2Q76I76 1423 aa28.33■■■□□ 2.13
CLN6-206ENST00000565471 THSD7AQ9UPZ6 1657 aa28.32■■■□□ 2.12
CLN6-206ENST00000565471 CARD11Q9BXL7 1154 aa28.31■■■□□ 2.12
CLN6-206ENST00000565471 SPATA31A1Q5TZJ5 1347 aa28.31■■■□□ 2.12
CLN6-206ENST00000565471 LMO7Q8WWI1 1683 aa28.31■■■□□ 2.12
CLN6-206ENST00000565471 GCP02774 474 aa28.3■■■□□ 2.12
CLN6-206ENST00000565471 ZNF692Q9BU19 519 aaPredicted RBP28.29■■■□□ 2.12
CLN6-206ENST00000565471 STRN4Q9NRL3 753 aa28.29■■■□□ 2.12
CLN6-206ENST00000565471 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
CLN6-206ENST00000565471 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
CLN6-206ENST00000565471 SLIT3O75094 1523 aa28.28■■■□□ 2.12
CLN6-206ENST00000565471 PIK3C2AO00443 1686 aa28.27■■■□□ 2.12
CLN6-206ENST00000565471 NLRP6P59044 892 aa28.27■■■□□ 2.12
CLN6-206ENST00000565471 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
CLN6-206ENST00000565471 EVA1CP58658 441 aa28.25■■■□□ 2.11
CLN6-206ENST00000565471 CPSF1Q10570 1443 aaKnown RBP28.25■■■□□ 2.11
CLN6-206ENST00000565471 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
CLN6-206ENST00000565471 TTC21BQ7Z4L5 1316 aa28.22■■■□□ 2.11
CLN6-206ENST00000565471 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
CLN6-206ENST00000565471 BARGINQ6ZT62 677 aa28.21■■■□□ 2.11
CLN6-206ENST00000565471 COL5A2P05997 1499 aaPredicted RBP28.21■■■□□ 2.11
CLN6-206ENST00000565471 LARP1Q6PKG0 1096 aaKnown RBP28.2■■■□□ 2.1
CLN6-206ENST00000565471 DEFB132Q7Z7B7 95 aa28.2■■■□□ 2.1
CLN6-206ENST00000565471 AATKQ6ZMQ8 1374 aa28.2■■■□□ 2.1
CLN6-206ENST00000565471 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
CLN6-206ENST00000565471 KTN1Q86UP2 1357 aaKnown RBP28.18■■■□□ 2.1
CLN6-206ENST00000565471 TCP11L2Q8N4U5 519 aa28.17■■■□□ 2.1
CLN6-206ENST00000565471 USP35Q9P2H5 1018 aa28.17■■■□□ 2.1
CLN6-206ENST00000565471 RGPD1P0DJD0 1748 aa28.16■■■□□ 2.1
CLN6-206ENST00000565471 THRAP3Q9Y2W1 955 aaKnown RBP28.16■■■□□ 2.1
CLN6-206ENST00000565471 BAG6P46379 1132 aa28.15■■■□□ 2.1
CLN6-206ENST00000565471 COL18A1P39060 1754 aa28.14■■■□□ 2.1
CLN6-206ENST00000565471 FAM182BQ5T319 152 aa28.14■■■□□ 2.1
CLN6-206ENST00000565471 KCNH5Q8NCM2 988 aa28.14■■■□□ 2.1
CLN6-206ENST00000565471 PUS7Q96PZ0 661 aaKnown RBP28.14■■■□□ 2.1
CLN6-206ENST00000565471 CD163L1Q9NR16 1453 aa28.14■■■□□ 2.09
CLN6-206ENST00000565471 CRB1P82279 1406 aa28.13■■■□□ 2.09
CLN6-206ENST00000565471 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
CLN6-206ENST00000565471 FAM196AQ6ZSG2 479 aa28.11■■■□□ 2.09
CLN6-206ENST00000565471 ARHGEF25Q86VW2 580 aa28.1■■■□□ 2.09
CLN6-206ENST00000565471 USP54Q70EL1 1684 aa28.1■■■□□ 2.09
CLN6-206ENST00000565471 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
CLN6-206ENST00000565471 NFAT5O94916 1531 aa28.09■■■□□ 2.09
CLN6-206ENST00000565471 USP31Q70CQ4 1352 aa28.09■■■□□ 2.09
CLN6-206ENST00000565471 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
CLN6-206ENST00000565471 PARP4Q9UKK3 1724 aaKnown RBP28.09■■■□□ 2.09
CLN6-206ENST00000565471 TMC1Q8TDI8 760 aa28.08■■■□□ 2.09
CLN6-206ENST00000565471 SLC24A1O60721 1099 aa28.07■■■□□ 2.08
CLN6-206ENST00000565471 PDE3BQ13370 1112 aa28.07■■■□□ 2.08
CLN6-206ENST00000565471 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
CLN6-206ENST00000565471 TESK2Q96S53 571 aa28.07■■■□□ 2.08
CLN6-206ENST00000565471 SLC12A5Q9H2X9 1139 aa28.06■■■□□ 2.08
CLN6-206ENST00000565471 ABCC6O95255 1503 aa28.06■■■□□ 2.08
CLN6-206ENST00000565471 ST20-MTHFSA0A0A6YYL1 179 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms