RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 SBNO2Q9Y2G9 1366 aa31.72■■■□□ 2.67
CDH11-211ENST00000565210 BRD4O60885 1362 aaPredicted RBP31.71■■■□□ 2.67
CDH11-211ENST00000565210 CCER1Q8TC90 406 aaPredicted RBP31.71■■■□□ 2.67
CDH11-211ENST00000565210 ATAD2Q6PL18 1390 aa31.69■■■□□ 2.66
CDH11-211ENST00000565210 TRPM3Q9HCF6 1732 aaPredicted RBP31.69■■■□□ 2.66
CDH11-211ENST00000565210 CDK12Q9NYV4 1490 aaPredicted RBP31.69■■■□□ 2.66
CDH11-211ENST00000565210 TOPAZ1Q8N9V7 1692 aa31.68■■■□□ 2.66
CDH11-211ENST00000565210 UNC5CLQ8IV45 518 aa31.68■■■□□ 2.66
CDH11-211ENST00000565210 ABTB2Q8N961 1025 aa31.67■■■□□ 2.66
CDH11-211ENST00000565210 ZNF692Q9BU19 519 aaPredicted RBP31.67■■■□□ 2.66
CDH11-211ENST00000565210 MARF1Q9Y4F3 1742 aaKnown RBP31.66■■■□□ 2.66
CDH11-211ENST00000565210 BCL9LQ86UU0 1499 aa31.64■■■□□ 2.66
CDH11-211ENST00000565210 ALS2Q96Q42 1657 aa31.64■■■□□ 2.65
CDH11-211ENST00000565210 ATRNO75882 1429 aa31.63■■■□□ 2.65
CDH11-211ENST00000565210 SLIT2O94813 1529 aa31.62■■■□□ 2.65
CDH11-211ENST00000565210 NLRP13Q86W25 1043 aa31.62■■■□□ 2.65
CDH11-211ENST00000565210 GJD4Q96KN9 370 aaPredicted RBP31.61■■■□□ 2.65
CDH11-211ENST00000565210 FAM83GA6ND36 823 aa31.6■■■□□ 2.65
CDH11-211ENST00000565210 PUS7Q96PZ0 661 aaKnown RBP31.6■■■□□ 2.65
CDH11-211ENST00000565210 NUTM2GQ5VZR2 741 aa31.59■■■□□ 2.65
CDH11-211ENST00000565210 ST20-MTHFSA0A0A6YYL1 179 aa31.58■■■□□ 2.65
CDH11-211ENST00000565210 PRDM11Q9NQV5 511 aa31.57■■■□□ 2.64
CDH11-211ENST00000565210 USP6P35125 1406 aa31.57■■■□□ 2.64
CDH11-211ENST00000565210 VPS72Q15906 364 aa31.54■■■□□ 2.64
CDH11-211ENST00000565210 TMC1Q8TDI8 760 aa31.54■■■□□ 2.64
CDH11-211ENST00000565210 CCDC9Q9Y3X0 531 aaKnown RBP31.54■■■□□ 2.64
CDH11-211ENST00000565210 BTG4Q9NY30 223 aa31.53■■■□□ 2.64
CDH11-211ENST00000565210 ABCA3Q99758 1704 aa31.52■■■□□ 2.64
CDH11-211ENST00000565210 NLRP6P59044 892 aa31.52■■■□□ 2.64
CDH11-211ENST00000565210 RGS12O14924 1447 aa31.51■■■□□ 2.64
CDH11-211ENST00000565210 HDGFL2Q7Z4V5 671 aaPredicted RBP31.51■■■□□ 2.63
CDH11-211ENST00000565210 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.5■■■□□ 2.63
CDH11-211ENST00000565210 TTC21AQ8NDW8 1320 aa31.49■■■□□ 2.63
CDH11-211ENST00000565210 USP47Q96K76 1375 aa31.49■■■□□ 2.63
CDH11-211ENST00000565210 ZC3H6P61129 1189 aaKnown RBP31.49■■■□□ 2.63
CDH11-211ENST00000565210 TESK2Q96S53 571 aa31.49■■■□□ 2.63
CDH11-211ENST00000565210 KTN1Q86UP2 1357 aaKnown RBP31.48■■■□□ 2.63
CDH11-211ENST00000565210 TMF1P82094 1093 aa31.48■■■□□ 2.63
CDH11-211ENST00000565210 TERF2IPQ9NYB0 399 aa31.48■■■□□ 2.63
CDH11-211ENST00000565210 USP19O94966 1318 aa31.48■■■□□ 2.63
CDH11-211ENST00000565210 TTC21BQ7Z4L5 1316 aa31.48■■■□□ 2.63
CDH11-211ENST00000565210 NWD2Q9ULI1 1742 aa31.47■■■□□ 2.63
CDH11-211ENST00000565210 KIAA0232Q92628 1395 aa31.47■■■□□ 2.63
CDH11-211ENST00000565210 GCP02774 474 aa31.47■■■□□ 2.63
CDH11-211ENST00000565210 COL14A1Q05707 1796 aaKnown RBP31.46■■■□□ 2.63
CDH11-211ENST00000565210 CDCA8Q53HL2 280 aa31.46■■■□□ 2.63
CDH11-211ENST00000565210 CPSF1Q10570 1443 aaKnown RBP31.46■■■□□ 2.63
CDH11-211ENST00000565210 SSH2Q76I76 1423 aa31.45■■■□□ 2.63
CDH11-211ENST00000565210 NINLQ9Y2I6 1382 aa31.43■■■□□ 2.62
CDH11-211ENST00000565210 SLC12A5Q9H2X9 1139 aa31.43■■■□□ 2.62
CDH11-211ENST00000565210 PLCH1Q4KWH8 1693 aa31.42■■■□□ 2.62
CDH11-211ENST00000565210 CHRNA2Q15822 529 aa31.42■■■□□ 2.62
CDH11-211ENST00000565210 KCNH5Q8NCM2 988 aa31.42■■■□□ 2.62
CDH11-211ENST00000565210 CPDO75976 1380 aa31.42■■■□□ 2.62
CDH11-211ENST00000565210 EVA1CP58658 441 aa31.41■■■□□ 2.62
CDH11-211ENST00000565210 UPF1Q92900 1129 aaKnown RBP eCLIP31.41■■■□□ 2.62
CDH11-211ENST00000565210 CRYBG1Q9Y4K1 1723 aa31.41■■■□□ 2.62
CDH11-211ENST00000565210 PHRF1Q9P1Y6 1649 aaKnown RBP31.38■■■□□ 2.61
CDH11-211ENST00000565210 ONECUT3O60422 494 aaPredicted RBP31.37■■■□□ 2.61
CDH11-211ENST00000565210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.36■■■□□ 2.61
CDH11-211ENST00000565210 SEPT12Q8IYM1 358 aa31.36■■■□□ 2.61
CDH11-211ENST00000565210 STRN4Q9NRL3 753 aa31.36■■■□□ 2.61
CDH11-211ENST00000565210 A0A0G2JS52 829 aa31.35■■■□□ 2.61
CDH11-211ENST00000565210 MYT1Q01538 1121 aa31.35■■■□□ 2.61
CDH11-211ENST00000565210 AKAP12Q02952 1782 aa31.35■■■□□ 2.61
CDH11-211ENST00000565210 GLI3P10071 1580 aa31.34■■■□□ 2.61
CDH11-211ENST00000565210 SPATA31A5Q5VU36 1347 aa31.33■■■□□ 2.61
CDH11-211ENST00000565210 SPATA31A7Q8IWB4 1347 aa31.33■■■□□ 2.61
CDH11-211ENST00000565210 ZBTB7CA1YPR0 619 aa31.33■■■□□ 2.61
CDH11-211ENST00000565210 NRKQ7Z2Y5 1582 aa31.33■■■□□ 2.61
CDH11-211ENST00000565210 EDC4Q6P2E9 1401 aaKnown RBP31.31■■■□□ 2.6
CDH11-211ENST00000565210 FAM98CQ17RN3 349 aaKnown RBP31.3■■■□□ 2.6
CDH11-211ENST00000565210 SLIT3O75094 1523 aa31.29■■■□□ 2.6
CDH11-211ENST00000565210 CD163L1Q9NR16 1453 aa31.29■■■□□ 2.6
CDH11-211ENST00000565210 NRAPQ86VF7 1730 aa31.29■■■□□ 2.6
CDH11-211ENST00000565210 A0A1W2PP64 1363 aa31.29■■■□□ 2.6
CDH11-211ENST00000565210 EIF4G2P78344 907 aaKnown RBP eCLIP31.28■■■□□ 2.6
CDH11-211ENST00000565210 AATKQ6ZMQ8 1374 aa31.28■■■□□ 2.6
CDH11-211ENST00000565210 USP31Q70CQ4 1352 aa31.28■■■□□ 2.6
CDH11-211ENST00000565210 CCDC125Q86Z20 511 aa31.27■■■□□ 2.6
CDH11-211ENST00000565210 PIK3C2AO00443 1686 aa31.27■■■□□ 2.6
CDH11-211ENST00000565210 SPATA31A1Q5TZJ5 1347 aa31.26■■■□□ 2.6
CDH11-211ENST00000565210 KRT27Q7Z3Y8 459 aa31.26■■■□□ 2.59
CDH11-211ENST00000565210 MON2Q7Z3U7 1717 aa31.26■■■□□ 2.59
CDH11-211ENST00000565210 SOX12O15370 315 aa31.25■■■□□ 2.59
CDH11-211ENST00000565210 NME9Q86XW9 330 aa31.25■■■□□ 2.59
CDH11-211ENST00000565210 ARHGEF25Q86VW2 580 aa31.24■■■□□ 2.59
CDH11-211ENST00000565210 ANKRD36BQ8N2N9 1353 aa31.23■■■□□ 2.59
CDH11-211ENST00000565210 USP35Q9P2H5 1018 aa31.22■■■□□ 2.59
CDH11-211ENST00000565210 THRAP3Q9Y2W1 955 aaKnown RBP31.22■■■□□ 2.59
CDH11-211ENST00000565210 CAMTA1Q9Y6Y1 1673 aa31.22■■■□□ 2.59
CDH11-211ENST00000565210 LARP1Q6PKG0 1096 aaKnown RBP31.21■■■□□ 2.59
CDH11-211ENST00000565210 TCP11L2Q8N4U5 519 aa31.2■■■□□ 2.59
CDH11-211ENST00000565210 BARGINQ6ZT62 677 aa31.19■■■□□ 2.58
CDH11-211ENST00000565210 COG3Q96JB2 828 aa31.18■■■□□ 2.58
CDH11-211ENST00000565210 ZRANB1Q9UGI0 708 aa31.18■■■□□ 2.58
CDH11-211ENST00000565210 LMO7Q8WWI1 1683 aa31.16■■■□□ 2.58
CDH11-211ENST00000565210 COL5A2P05997 1499 aaPredicted RBP31.16■■■□□ 2.58
CDH11-211ENST00000565210 TOM1L2Q6ZVM7 507 aa31.16■■■□□ 2.58
CDH11-211ENST00000565210 SF3B2Q13435 895 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms