RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 POLR3AO14802 1390 aaPredicted RBP21.26■□□□□ 0.99
USB1-210ENST00000565151 GPRASP1Q5JY77 1395 aa21.26■□□□□ 0.99
USB1-210ENST00000565151 NBPF8Q3BBV2 869 aa21.26■□□□□ 0.99
USB1-210ENST00000565151 NGDNQ8NEJ9 315 aaKnown RBP21.26■□□□□ 0.99
USB1-210ENST00000565151 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
USB1-210ENST00000565151 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
USB1-210ENST00000565151 ACEP12821 1306 aa21.24■□□□□ 0.99
USB1-210ENST00000565151 PLEKHG3A1L390 1219 aa21.23■□□□□ 0.99
USB1-210ENST00000565151 CCDC61Q9Y6R9 512 aa21.22■□□□□ 0.99
USB1-210ENST00000565151 PAK3O75914 559 aaPredicted RBP21.21■□□□□ 0.99
USB1-210ENST00000565151 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
USB1-210ENST00000565151 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
USB1-210ENST00000565151 VPS72Q15906 364 aa21.19■□□□□ 0.98
USB1-210ENST00000565151 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
USB1-210ENST00000565151 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
USB1-210ENST00000565151 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
USB1-210ENST00000565151 NRKQ7Z2Y5 1582 aa21.17■□□□□ 0.98
USB1-210ENST00000565151 AKAP12Q02952 1782 aa21.17■□□□□ 0.98
USB1-210ENST00000565151 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
USB1-210ENST00000565151 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
USB1-210ENST00000565151 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
USB1-210ENST00000565151 ONECUT3O60422 494 aaPredicted RBP21.14■□□□□ 0.97
USB1-210ENST00000565151 KIAA0232Q92628 1395 aa21.13■□□□□ 0.97
USB1-210ENST00000565151 PIK3C2AO00443 1686 aa21.13■□□□□ 0.97
USB1-210ENST00000565151 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
USB1-210ENST00000565151 LMO7Q8WWI1 1683 aa21.12■□□□□ 0.97
USB1-210ENST00000565151 CABP1Q9NZU7 370 aa21.12■□□□□ 0.97
USB1-210ENST00000565151 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
USB1-210ENST00000565151 CHRNA2Q15822 529 aa21.11■□□□□ 0.97
USB1-210ENST00000565151 SEPT12Q8IYM1 358 aa21.11■□□□□ 0.97
USB1-210ENST00000565151 THSD7AQ9UPZ6 1657 aa21.1■□□□□ 0.97
USB1-210ENST00000565151 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
USB1-210ENST00000565151 USP19O94966 1318 aa21.09■□□□□ 0.97
USB1-210ENST00000565151 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
USB1-210ENST00000565151 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
USB1-210ENST00000565151 USP6P35125 1406 aa21.09■□□□□ 0.97
USB1-210ENST00000565151 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
USB1-210ENST00000565151 PRDM11Q9NQV5 511 aa21.08■□□□□ 0.97
USB1-210ENST00000565151 COL18A1P39060 1754 aa21.08■□□□□ 0.96
USB1-210ENST00000565151 SPATA31A5Q5VU36 1347 aa21.07■□□□□ 0.96
USB1-210ENST00000565151 SPATA31A7Q8IWB4 1347 aa21.07■□□□□ 0.96
USB1-210ENST00000565151 RGPD5Q99666 1765 aa21.07■□□□□ 0.96
USB1-210ENST00000565151 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
USB1-210ENST00000565151 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
USB1-210ENST00000565151 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
USB1-210ENST00000565151 SLIT3O75094 1523 aa21.05■□□□□ 0.96
USB1-210ENST00000565151 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
USB1-210ENST00000565151 SRCAPQ6ZRS2 3230 aa21.03■□□□□ 0.96
USB1-210ENST00000565151 CPDO75976 1380 aa21.02■□□□□ 0.96
USB1-210ENST00000565151 SBNO2Q9Y2G9 1366 aa21.02■□□□□ 0.96
USB1-210ENST00000565151 GCP02774 474 aa21.02■□□□□ 0.96
USB1-210ENST00000565151 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
USB1-210ENST00000565151 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
USB1-210ENST00000565151 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
USB1-210ENST00000565151 KRT27Q7Z3Y8 459 aa21.01■□□□□ 0.95
USB1-210ENST00000565151 SPATA31A1Q5TZJ5 1347 aa21.01■□□□□ 0.95
USB1-210ENST00000565151 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
USB1-210ENST00000565151 FAM182BQ5T319 152 aa21■□□□□ 0.95
USB1-210ENST00000565151 BLMP54132 1417 aaPredicted RBP20.99■□□□□ 0.95
USB1-210ENST00000565151 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
USB1-210ENST00000565151 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
USB1-210ENST00000565151 TNS1Q9HBL0 1735 aaKnown RBP20.98■□□□□ 0.95
USB1-210ENST00000565151 DEFB132Q7Z7B7 95 aa20.98■□□□□ 0.95
USB1-210ENST00000565151 CCDC125Q86Z20 511 aa20.98■□□□□ 0.95
USB1-210ENST00000565151 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
USB1-210ENST00000565151 NLRP6P59044 892 aa20.97■□□□□ 0.95
USB1-210ENST00000565151 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
USB1-210ENST00000565151 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
USB1-210ENST00000565151 COL5A2P05997 1499 aaPredicted RBP20.96■□□□□ 0.95
USB1-210ENST00000565151 ZRANB1Q9UGI0 708 aa20.95■□□□□ 0.94
USB1-210ENST00000565151 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.94
USB1-210ENST00000565151 WNK3Q9BYP7 1800 aa20.94■□□□□ 0.94
USB1-210ENST00000565151 NFAT5O94916 1531 aa20.94■□□□□ 0.94
USB1-210ENST00000565151 TESK2Q96S53 571 aa20.94■□□□□ 0.94
USB1-210ENST00000565151 A0A0G2JS52 829 aa20.93■□□□□ 0.94
USB1-210ENST00000565151 MYT1Q01538 1121 aa20.93■□□□□ 0.94
USB1-210ENST00000565151 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
USB1-210ENST00000565151 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
USB1-210ENST00000565151 USP35Q9P2H5 1018 aa20.92■□□□□ 0.94
USB1-210ENST00000565151 AXIN2Q9Y2T1 843 aa20.92■□□□□ 0.94
USB1-210ENST00000565151 KTN1Q86UP2 1357 aaKnown RBP20.92■□□□□ 0.94
USB1-210ENST00000565151 LTN1O94822 1766 aa20.91■□□□□ 0.94
USB1-210ENST00000565151 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
USB1-210ENST00000565151 AATKQ6ZMQ8 1374 aa20.9■□□□□ 0.94
USB1-210ENST00000565151 EVA1CP58658 441 aa20.9■□□□□ 0.94
USB1-210ENST00000565151 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.93
USB1-210ENST00000565151 BARGINQ6ZT62 677 aa20.89■□□□□ 0.93
USB1-210ENST00000565151 SBF2Q86WG5 1849 aa20.88■□□□□ 0.93
USB1-210ENST00000565151 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
USB1-210ENST00000565151 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
USB1-210ENST00000565151 ARHGEF25Q86VW2 580 aa20.88■□□□□ 0.93
USB1-210ENST00000565151 PEAK1Q9H792 1746 aa20.87■□□□□ 0.93
USB1-210ENST00000565151 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
USB1-210ENST00000565151 SOX12O15370 315 aa20.86■□□□□ 0.93
USB1-210ENST00000565151 NME9Q86XW9 330 aa20.86■□□□□ 0.93
USB1-210ENST00000565151 CRB1P82279 1406 aa20.86■□□□□ 0.93
USB1-210ENST00000565151 A0A1W2PP64 1363 aa20.85■□□□□ 0.93
USB1-210ENST00000565151 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
USB1-210ENST00000565151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
USB1-210ENST00000565151 TCP11L2Q8N4U5 519 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms