RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MCM6Q14566 821 aa9.04□□□□□ -0.96
PALB2-203ENST00000565038 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
PALB2-203ENST00000565038 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
PALB2-203ENST00000565038 ARMC2Q8NEN0 867 aa9.03□□□□□ -0.96
PALB2-203ENST00000565038 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
PALB2-203ENST00000565038 FOXJ1Q92949 421 aa9.02□□□□□ -0.97
PALB2-203ENST00000565038 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
PALB2-203ENST00000565038 WNT7BP56706 349 aa9.01□□□□□ -0.97
PALB2-203ENST00000565038 NBPF14Q5TI25 921 aa9.01□□□□□ -0.97
PALB2-203ENST00000565038 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
PALB2-203ENST00000565038 AGERQ15109 404 aa9□□□□□ -0.97
PALB2-203ENST00000565038 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
PALB2-203ENST00000565038 TBC1D2BQ9UPU7 963 aa8.99□□□□□ -0.97
PALB2-203ENST00000565038 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
PALB2-203ENST00000565038 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
PALB2-203ENST00000565038 APBB1O00213 710 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 WNT7AO00755 349 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 SOCS7O14512 581 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 GDF9O60383 454 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 FLIIQ13045 1269 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 MRGPRX2Q96LB1 330 aa8.98□□□□□ -0.97
PALB2-203ENST00000565038 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 PDXDC2PQ6P474 469 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 SH3BP5LQ7L8J4 393 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 PDZRN3Q9UPQ7 1066 aa8.97□□□□□ -0.97
PALB2-203ENST00000565038 GPR37L1O60883 481 aa8.96□□□□□ -0.98
PALB2-203ENST00000565038 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.98
PALB2-203ENST00000565038 GPKOWQ92917 476 aaPredicted RBP eCLIP8.96□□□□□ -0.98
PALB2-203ENST00000565038 POM121Q96HA1 1249 aa8.96□□□□□ -0.98
PALB2-203ENST00000565038 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
PALB2-203ENST00000565038 SH3RF1Q7Z6J0 888 aa8.95□□□□□ -0.98
PALB2-203ENST00000565038 OCSTAMPQ9BR26 566 aa8.95□□□□□ -0.98
PALB2-203ENST00000565038 ARHGAP9Q9BRR9 750 aa8.95□□□□□ -0.98
PALB2-203ENST00000565038 PRM3Q9NNZ6 103 aa8.95□□□□□ -0.98
PALB2-203ENST00000565038 GFRA3O60609 400 aa8.94□□□□□ -0.98
PALB2-203ENST00000565038 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
PALB2-203ENST00000565038 ABL2P42684 1182 aa8.94□□□□□ -0.98
PALB2-203ENST00000565038 PTK2Q05397 1052 aa8.94□□□□□ -0.98
PALB2-203ENST00000565038 COG6Q9Y2V7 657 aa8.94□□□□□ -0.98
PALB2-203ENST00000565038 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
PALB2-203ENST00000565038 PRR20EP86478 221 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 PRR20CP86479 221 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 PRR20DP86480 221 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 PRR20BP86481 221 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 PRR20AP86496 221 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 CYP4X1Q8N118 509 aa8.93□□□□□ -0.98
PALB2-203ENST00000565038 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
PALB2-203ENST00000565038 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
PALB2-203ENST00000565038 SIAH2O43255 324 aa8.92□□□□□ -0.98
PALB2-203ENST00000565038 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
PALB2-203ENST00000565038 ZBTB33Q86T24 672 aa8.92□□□□□ -0.98
PALB2-203ENST00000565038 FAM174AQ8TBP5 190 aa8.92□□□□□ -0.98
PALB2-203ENST00000565038 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
PALB2-203ENST00000565038 ZBBXA8MT70 800 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 IRF5Q13568 498 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 SNIP1Q8TAD8 396 aaKnown RBP8.91□□□□□ -0.98
PALB2-203ENST00000565038 ADAM32Q8TC27 787 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 CLUAP1Q96AJ1 413 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 TOR4AQ9NXH8 423 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 GPSM3Q9Y4H4 160 aa8.91□□□□□ -0.98
PALB2-203ENST00000565038 J3QL48 77 aa8.9□□□□□ -0.98
PALB2-203ENST00000565038 RAD21O60216 631 aa8.9□□□□□ -0.98
PALB2-203ENST00000565038 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
PALB2-203ENST00000565038 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
PALB2-203ENST00000565038 C1QTNF2Q9BXJ5 285 aa8.9□□□□□ -0.98
PALB2-203ENST00000565038 NR1H3Q13133 447 aa8.88□□□□□ -0.99
PALB2-203ENST00000565038 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
PALB2-203ENST00000565038 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
PALB2-203ENST00000565038 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
PALB2-203ENST00000565038 SMPD1P17405 629 aa8.86□□□□□ -0.99
PALB2-203ENST00000565038 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
PALB2-203ENST00000565038 SLC10A4Q96EP9 437 aa8.86□□□□□ -0.99
PALB2-203ENST00000565038 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
PALB2-203ENST00000565038 DZIP3Q86Y13 1208 aaKnown RBP8.85□□□□□ -0.99
PALB2-203ENST00000565038 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
PALB2-203ENST00000565038 WASF2Q9Y6W5 498 aa8.85□□□□□ -0.99
PALB2-203ENST00000565038 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
PALB2-203ENST00000565038 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
PALB2-203ENST00000565038 MPNDQ8N594 471 aa8.84□□□□□ -0.99
PALB2-203ENST00000565038 GRM5P41594 1212 aa8.83□□□□□ -1
PALB2-203ENST00000565038 PKDCCQ504Y2 493 aa8.83□□□□□ -1
PALB2-203ENST00000565038 ADH1CP00326 375 aa8.82□□□□□ -1
PALB2-203ENST00000565038 FSHRP23945 695 aa8.82□□□□□ -1
PALB2-203ENST00000565038 WASHC4Q2M389 1173 aa8.82□□□□□ -1
PALB2-203ENST00000565038 HPS1Q92902 700 aa8.82□□□□□ -1
PALB2-203ENST00000565038 RAB15P59190 212 aa8.81□□□□□ -1
PALB2-203ENST00000565038 PROSER2Q86WR7 435 aaPredicted RBP8.81□□□□□ -1
PALB2-203ENST00000565038 WWC1Q8IX03 1113 aa8.81□□□□□ -1
PALB2-203ENST00000565038 KCTD15Q96SI1 283 aaPredicted RBP8.81□□□□□ -1
PALB2-203ENST00000565038 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
PALB2-203ENST00000565038 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
PALB2-203ENST00000565038 POM121CA8CG34 1229 aa8.8□□□□□ -1
PALB2-203ENST00000565038 DGAT1O75907 488 aa8.8□□□□□ -1
PALB2-203ENST00000565038 NR3C2P08235 984 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms