RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 EIF3JO75822 258 aaKnown RBP7.64□□□□□ -1.19
PTPN9-204ENST00000564970 ATP6V1AP38606 617 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 SARNPP82979 210 aaKnown RBP7.64□□□□□ -1.19
PTPN9-204ENST00000564970 FKBP5Q13451 457 aaPredicted RBP7.64□□□□□ -1.19
PTPN9-204ENST00000564970 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 SLFNL1Q499Z3 407 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 CT47A1Q5JQC4 288 aaPredicted RBP7.64□□□□□ -1.19
PTPN9-204ENST00000564970 LRCH2Q5VUJ6 765 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 NUTM1Q86Y26 1132 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 CEP89Q96ST8 783 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 RSPH14Q9UHP6 348 aa7.64□□□□□ -1.19
PTPN9-204ENST00000564970 PLEKHD1A6NEE1 506 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 KCNA4P22459 653 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 USP8P40818 1118 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 XPCQ01831 940 aaPredicted RBP7.63□□□□□ -1.19
PTPN9-204ENST00000564970 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 MTA1Q13330 715 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 FAM184AQ8NB25 1140 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 SNX21Q969T3 373 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 CFAP44Q96MT7 982 aa7.63□□□□□ -1.19
PTPN9-204ENST00000564970 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 NLRP1Q9C000 1473 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 USP19O94966 1318 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 ZBTB22O15209 634 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 IPO7O95373 1038 aaKnown RBP7.62□□□□□ -1.19
PTPN9-204ENST00000564970 CYP2C19P33261 490 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 NUCB2P80303 420 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 UVSSAQ2YD98 709 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 HSP90AB4PQ58FF6 505 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 TSHZ1Q6ZSZ6 1077 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 CERS3Q8IU89 383 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 GZF1Q9H116 711 aaPredicted RBP7.62□□□□□ -1.19
PTPN9-204ENST00000564970 BCL2L12Q9HB09 334 aa7.62□□□□□ -1.19
PTPN9-204ENST00000564970 EIF4G3O43432 1585 aaKnown RBP7.62□□□□□ -1.19
PTPN9-204ENST00000564970 ATP2B1P20020 1258 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 ARID4AP29374 1257 aaPredicted RBP7.61□□□□□ -1.19
PTPN9-204ENST00000564970 IRX1P78414 480 aaPredicted RBP7.61□□□□□ -1.19
PTPN9-204ENST00000564970 RAD51AP2Q09MP3 1159 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 ANKRD23Q86SG2 305 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 HSCBQ8IWL3 235 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 ERCC4Q92889 916 aaPredicted RBP7.61□□□□□ -1.19
PTPN9-204ENST00000564970 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 CXorf56Q9H5V9 222 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 PRDM16Q9HAZ2 1276 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 SPINK5Q9NQ38 1064 aaPredicted RBP7.61□□□□□ -1.19
PTPN9-204ENST00000564970 FAM53CQ9NYF3 392 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
PTPN9-204ENST00000564970 CTNNA3Q9UI47 895 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 JRKLQ9Y4A0 524 aa7.61□□□□□ -1.19
PTPN9-204ENST00000564970 DHX29Q7Z478 1369 aaKnown RBP7.6□□□□□ -1.19
PTPN9-204ENST00000564970 SPATA31D1Q6ZQQ2 1576 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
PTPN9-204ENST00000564970 SETSIPP0DME0 302 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 DDIT3P35638 169 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 HIRIP3Q9BW71 556 aaPredicted RBP7.6□□□□□ -1.19
PTPN9-204ENST00000564970 TEX13AQ9BXU3 409 aaPredicted RBP7.6□□□□□ -1.19
PTPN9-204ENST00000564970 FAM107BQ9H098 131 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 UACAQ9BZF9 1416 aa7.6□□□□□ -1.19
PTPN9-204ENST00000564970 ANKRD30AQ9BXX3 1397 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 PLEKHH1Q9ULM0 1364 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 IVLP07476 585 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 TPM4P67936 248 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 GAS2L3Q86XJ1 694 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 IQUBQ8NA54 791 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 PNISRQ8TF01 805 aaKnown RBP7.59□□□□□ -1.19
PTPN9-204ENST00000564970 STAG1Q8WVM7 1258 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 NUCKS1Q9H1E3 243 aaKnown RBP7.59□□□□□ -1.19
PTPN9-204ENST00000564970 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
PTPN9-204ENST00000564970 SUDS3Q9H7L9 328 aaPredicted RBP7.59□□□□□ -1.19
PTPN9-204ENST00000564970 PANK3Q9H999 370 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 ANAPC4Q9UJX5 808 aa7.59□□□□□ -1.19
PTPN9-204ENST00000564970 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 H0YHG0 523 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 IRF6O14896 467 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 ATP8B1O43520 1251 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 PLCB2Q00722 1185 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 NOLC1Q14978 699 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPN9-204ENST00000564970 TTC31Q49AM3 519 aaPredicted RBP7.58□□□□□ -1.2
PTPN9-204ENST00000564970 MCTP2Q6DN12 878 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 ANKRD20A12PQ8NF67 263 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 ZNF397Q8NF99 534 aaPredicted RBP7.58□□□□□ -1.2
PTPN9-204ENST00000564970 PPM1EQ8WY54 764 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 SGSM3Q96HU1 749 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 SUFUQ9UMX1 484 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 KDM6BO15054 1643 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 MTUS2Q5JR59 1369 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
PTPN9-204ENST00000564970 CCDC189A1A4V9 331 aa7.57□□□□□ -1.2
PTPN9-204ENST00000564970 MPHOSPH10O00566 681 aaKnown RBP7.57□□□□□ -1.2
PTPN9-204ENST00000564970 MAGEA9P43362 315 aa7.57□□□□□ -1.2
PTPN9-204ENST00000564970 BMS1Q14692 1282 aaKnown RBP7.57□□□□□ -1.2
PTPN9-204ENST00000564970 JAKMIP3Q5VZ66 844 aa7.57□□□□□ -1.2
PTPN9-204ENST00000564970 FMNL3Q8IVF7 1028 aa7.57□□□□□ -1.2
PTPN9-204ENST00000564970 P3H3Q8IVL6 736 aa7.57□□□□□ -1.2
PTPN9-204ENST00000564970 KIF18AQ8NI77 898 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms