RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 DCCP43146 1447 aa15.14■□□□□ 0.01
SNX29-204ENST00000564791 TTC21BQ7Z4L5 1316 aa15.14■□□□□ 0.01
SNX29-204ENST00000564791 PHF8Q9UPP1 1060 aa15.14■□□□□ 0.01
SNX29-204ENST00000564791 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
SNX29-204ENST00000564791 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
SNX29-204ENST00000564791 HNRNPUQ00839 825 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX29-204ENST00000564791 C1orf167Q5SNV9 1468 aa15.12■□□□□ 0.01
SNX29-204ENST00000564791 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
SNX29-204ENST00000564791 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
SNX29-204ENST00000564791 SHPRHQ149N8 1683 aa15.11■□□□□ 0.01
SNX29-204ENST00000564791 MST1RQ04912 1400 aa15.11■□□□□ 0.01
SNX29-204ENST00000564791 MAP2P11137 1827 aaKnown RBP15.11■□□□□ 0.01
SNX29-204ENST00000564791 MSH6P52701 1360 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 TTC21AQ8NDW8 1320 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 ATF3P18847 181 aa15.1■□□□□ 0.01
SNX29-204ENST00000564791 MTHFSP49914 203 aa15.09■□□□□ 0.01
SNX29-204ENST00000564791 COG3Q96JB2 828 aa15.09■□□□□ 0.01
SNX29-204ENST00000564791 ORAI2Q96SN7 254 aa15.09■□□□□ 0.01
SNX29-204ENST00000564791 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
SNX29-204ENST00000564791 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
SNX29-204ENST00000564791 MARF1Q9Y4F3 1742 aaKnown RBP15.08■□□□□ 0.01
SNX29-204ENST00000564791 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
SNX29-204ENST00000564791 INSRP06213 1382 aa15.07■□□□□ 0
SNX29-204ENST00000564791 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
SNX29-204ENST00000564791 CADPS2Q86UW7 1296 aa15.06■□□□□ 0
SNX29-204ENST00000564791 COL3A1P02461 1466 aaPredicted RBP15.06■□□□□ 0
SNX29-204ENST00000564791 CFAP53Q96M91 514 aa15.06■□□□□ 0
SNX29-204ENST00000564791 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
SNX29-204ENST00000564791 AATKQ6ZMQ8 1374 aa15.05■□□□□ 0
SNX29-204ENST00000564791 USP31Q70CQ4 1352 aa15.05■□□□□ 0
SNX29-204ENST00000564791 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ 0
SNX29-204ENST00000564791 FBLN1P23142 703 aa15.05■□□□□ -0
SNX29-204ENST00000564791 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
SNX29-204ENST00000564791 PSME1Q06323 249 aa15.03■□□□□ -0
SNX29-204ENST00000564791 POLKQ9UBT6 870 aa15.03■□□□□ -0
SNX29-204ENST00000564791 FOXO3O43524 673 aa15.03■□□□□ -0
SNX29-204ENST00000564791 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
SNX29-204ENST00000564791 ZBED9Q6R2W3 1325 aa15.02■□□□□ -0
SNX29-204ENST00000564791 SENP3-EIF4A1A0A087X0R7 540 aa15.02□□□□□ -0.01
SNX29-204ENST00000564791 EMILIN1Q9Y6C2 1016 aa15.02□□□□□ -0.01
SNX29-204ENST00000564791 PNPLA6Q8IY17 1366 aa15.02□□□□□ -0.01
SNX29-204ENST00000564791 CDK12Q9NYV4 1490 aaPredicted RBP15.02□□□□□ -0.01
SNX29-204ENST00000564791 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
SNX29-204ENST00000564791 LTBP4Q8N2S1 1624 aa15.01□□□□□ -0.01
SNX29-204ENST00000564791 PEAK1Q9H792 1746 aa15.01□□□□□ -0.01
SNX29-204ENST00000564791 NLRP6P59044 892 aa15□□□□□ -0.01
SNX29-204ENST00000564791 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
SNX29-204ENST00000564791 NUTM2GQ5VZR2 741 aa15□□□□□ -0.01
SNX29-204ENST00000564791 ABTB2Q8N961 1025 aa15□□□□□ -0.01
SNX29-204ENST00000564791 ALS2Q96Q42 1657 aa15□□□□□ -0.01
SNX29-204ENST00000564791 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
SNX29-204ENST00000564791 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
SNX29-204ENST00000564791 SOX12O15370 315 aa14.98□□□□□ -0.01
SNX29-204ENST00000564791 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
SNX29-204ENST00000564791 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
SNX29-204ENST00000564791 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
SNX29-204ENST00000564791 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
SNX29-204ENST00000564791 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
SNX29-204ENST00000564791 PXDNQ92626 1479 aa14.96□□□□□ -0.01
SNX29-204ENST00000564791 LTN1O94822 1766 aa14.96□□□□□ -0.01
SNX29-204ENST00000564791 NPHP3Q7Z494 1330 aa14.96□□□□□ -0.02
SNX29-204ENST00000564791 NFAT5O94916 1531 aa14.96□□□□□ -0.02
SNX29-204ENST00000564791 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
SNX29-204ENST00000564791 SLIT3O75094 1523 aa14.95□□□□□ -0.02
SNX29-204ENST00000564791 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
SNX29-204ENST00000564791 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
SNX29-204ENST00000564791 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
SNX29-204ENST00000564791 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNX29-204ENST00000564791 SALL2Q9Y467 1007 aaPredicted RBP14.94□□□□□ -0.02
SNX29-204ENST00000564791 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
SNX29-204ENST00000564791 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
SNX29-204ENST00000564791 IQSEC2Q5JU85 1478 aa14.93□□□□□ -0.02
SNX29-204ENST00000564791 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
SNX29-204ENST00000564791 IL13P35225 146 aa14.92□□□□□ -0.02
SNX29-204ENST00000564791 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
SNX29-204ENST00000564791 FLT4P35916 1363 aa14.92□□□□□ -0.02
SNX29-204ENST00000564791 USP19O94966 1318 aa14.92□□□□□ -0.02
SNX29-204ENST00000564791 AEBP2Q6ZN18 517 aaPredicted RBP14.92□□□□□ -0.02
SNX29-204ENST00000564791 MED1Q15648 1581 aaPredicted RBP14.91□□□□□ -0.02
SNX29-204ENST00000564791 PHRF1Q9P1Y6 1649 aaKnown RBP14.91□□□□□ -0.02
SNX29-204ENST00000564791 APAF1O14727 1248 aa14.91□□□□□ -0.02
SNX29-204ENST00000564791 RUNDC1Q96C34 613 aa14.91□□□□□ -0.02
SNX29-204ENST00000564791 RGPD1P0DJD0 1748 aa14.9□□□□□ -0.02
SNX29-204ENST00000564791 CRYBG1Q9Y4K1 1723 aa14.9□□□□□ -0.02
SNX29-204ENST00000564791 KIF24Q5T7B8 1368 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 AMPHP49418 695 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
SNX29-204ENST00000564791 HSP90AB2PQ58FF8 381 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 KCNH5Q8NCM2 988 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 ROBO1Q9Y6N7 1651 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 RTL1A6NKG5 1358 aa14.89□□□□□ -0.03
SNX29-204ENST00000564791 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
SNX29-204ENST00000564791 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
SNX29-204ENST00000564791 PLEKHF1Q96S99 279 aa14.88□□□□□ -0.03
SNX29-204ENST00000564791 SOS2Q07890 1332 aaPredicted RBP14.87□□□□□ -0.03
SNX29-204ENST00000564791 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
SNX29-204ENST00000564791 GCP02774 474 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms