RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 AVPP01185 164 aa11.13□□□□□ -0.63
UBR1-205ENST00000564540 TRIM32Q13049 653 aa11.13□□□□□ -0.63
UBR1-205ENST00000564540 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
UBR1-205ENST00000564540 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
UBR1-205ENST00000564540 WIPF1O43516 503 aa11.11□□□□□ -0.63
UBR1-205ENST00000564540 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
UBR1-205ENST00000564540 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
UBR1-205ENST00000564540 CTHP32929 405 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 FOXC1Q12948 553 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
UBR1-205ENST00000564540 MAP10Q9P2G4 905 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
UBR1-205ENST00000564540 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
UBR1-205ENST00000564540 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
UBR1-205ENST00000564540 F12P00748 615 aaPredicted RBP11.07□□□□□ -0.64
UBR1-205ENST00000564540 TOR4AQ9NXH8 423 aa11.07□□□□□ -0.64
UBR1-205ENST00000564540 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
UBR1-205ENST00000564540 SKOR1P84550 965 aa11.06□□□□□ -0.64
UBR1-205ENST00000564540 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
UBR1-205ENST00000564540 RFC5P40937 340 aa11.05□□□□□ -0.64
UBR1-205ENST00000564540 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
UBR1-205ENST00000564540 AP1G2O75843 785 aa11.04□□□□□ -0.64
UBR1-205ENST00000564540 INSM1Q01101 510 aaPredicted RBP11.04□□□□□ -0.64
UBR1-205ENST00000564540 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
UBR1-205ENST00000564540 LRRN4Q8WUT4 740 aa11.04□□□□□ -0.64
UBR1-205ENST00000564540 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
UBR1-205ENST00000564540 AXIN1O15169 862 aa11.03□□□□□ -0.64
UBR1-205ENST00000564540 BAP1Q92560 729 aa11.02□□□□□ -0.65
UBR1-205ENST00000564540 WNT7AO00755 349 aa11.01□□□□□ -0.65
UBR1-205ENST00000564540 WNT7BP56706 349 aa11.01□□□□□ -0.65
UBR1-205ENST00000564540 SH3BP2P78314 561 aa11.01□□□□□ -0.65
UBR1-205ENST00000564540 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
UBR1-205ENST00000564540 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
UBR1-205ENST00000564540 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
UBR1-205ENST00000564540 ZNF511Q8NB15 262 aa10.98□□□□□ -0.65
UBR1-205ENST00000564540 CYP4X1Q8N118 509 aa10.97□□□□□ -0.65
UBR1-205ENST00000564540 HMX1Q9NP08 348 aaPredicted RBP10.97□□□□□ -0.65
UBR1-205ENST00000564540 NR6A1Q15406 480 aa10.96□□□□□ -0.65
UBR1-205ENST00000564540 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
UBR1-205ENST00000564540 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
UBR1-205ENST00000564540 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
UBR1-205ENST00000564540 FOXJ1Q92949 421 aa10.95□□□□□ -0.66
UBR1-205ENST00000564540 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
UBR1-205ENST00000564540 TTC24A2A3L6 582 aaPredicted RBP10.93□□□□□ -0.66
UBR1-205ENST00000564540 SNIP1Q8TAD8 396 aaKnown RBP10.92□□□□□ -0.66
UBR1-205ENST00000564540 ARMC2Q8NEN0 867 aa10.91□□□□□ -0.66
UBR1-205ENST00000564540 J3QL48 77 aa10.9□□□□□ -0.66
UBR1-205ENST00000564540 TERTO14746 1132 aaKnown RBP10.9□□□□□ -0.66
UBR1-205ENST00000564540 SIAH2O43255 324 aa10.9□□□□□ -0.66
UBR1-205ENST00000564540 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
UBR1-205ENST00000564540 SMPD1P17405 629 aa10.89□□□□□ -0.67
UBR1-205ENST00000564540 AGERQ15109 404 aa10.89□□□□□ -0.67
UBR1-205ENST00000564540 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
UBR1-205ENST00000564540 FKBPLQ9UIM3 349 aa10.89□□□□□ -0.67
UBR1-205ENST00000564540 ALDH1A1P00352 501 aa10.88□□□□□ -0.67
UBR1-205ENST00000564540 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
UBR1-205ENST00000564540 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
UBR1-205ENST00000564540 ATP13A2Q9NQ11 1180 aa10.88□□□□□ -0.67
UBR1-205ENST00000564540 TLL2Q9Y6L7 1015 aa10.88□□□□□ -0.67
UBR1-205ENST00000564540 LOC100996750A0A140TA64 210 aa10.87□□□□□ -0.67
UBR1-205ENST00000564540 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
UBR1-205ENST00000564540 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
UBR1-205ENST00000564540 KRTAP4-6Q9BYQ5 205 aa10.87□□□□□ -0.67
UBR1-205ENST00000564540 SH3BP5LQ7L8J4 393 aa10.86□□□□□ -0.67
UBR1-205ENST00000564540 BPHLQ86WA6 291 aaPredicted RBP10.86□□□□□ -0.67
UBR1-205ENST00000564540 SENP2Q9HC62 589 aa10.86□□□□□ -0.67
UBR1-205ENST00000564540 SNRKQ9NRH2 765 aa10.86□□□□□ -0.67
UBR1-205ENST00000564540 MAGEB6P1A0A0J9YX57 407 aa10.85□□□□□ -0.67
UBR1-205ENST00000564540 SH3RF1Q7Z6J0 888 aa10.85□□□□□ -0.67
UBR1-205ENST00000564540 BANK1Q8NDB2 785 aa10.85□□□□□ -0.67
UBR1-205ENST00000564540 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
UBR1-205ENST00000564540 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
UBR1-205ENST00000564540 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
UBR1-205ENST00000564540 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
UBR1-205ENST00000564540 FAM174AQ8TBP5 190 aa10.83□□□□□ -0.68
UBR1-205ENST00000564540 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
UBR1-205ENST00000564540 HPS1Q92902 700 aa10.82□□□□□ -0.68
UBR1-205ENST00000564540 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
UBR1-205ENST00000564540 OCSTAMPQ9BR26 566 aa10.81□□□□□ -0.68
UBR1-205ENST00000564540 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
UBR1-205ENST00000564540 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
UBR1-205ENST00000564540 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
UBR1-205ENST00000564540 C1QTNF2Q9BXJ5 285 aa10.8□□□□□ -0.68
UBR1-205ENST00000564540 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
UBR1-205ENST00000564540 FAM181BA6NEQ2 426 aa10.79□□□□□ -0.68
UBR1-205ENST00000564540 ERFEQ4G0M1 354 aa10.78□□□□□ -0.68
UBR1-205ENST00000564540 MPNDQ8N594 471 aa10.78□□□□□ -0.68
UBR1-205ENST00000564540 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
UBR1-205ENST00000564540 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
UBR1-205ENST00000564540 PTK2Q05397 1052 aa10.77□□□□□ -0.69
UBR1-205ENST00000564540 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.69
UBR1-205ENST00000564540 ADH1CP00326 375 aa10.76□□□□□ -0.69
UBR1-205ENST00000564540 ZBTB33Q86T24 672 aa10.76□□□□□ -0.69
UBR1-205ENST00000564540 GPR37L1O60883 481 aa10.75□□□□□ -0.69
UBR1-205ENST00000564540 LORP23490 312 aaPredicted RBP10.75□□□□□ -0.69
UBR1-205ENST00000564540 GRM5P41594 1212 aa10.75□□□□□ -0.69
UBR1-205ENST00000564540 NNTQ13423 1086 aa10.75□□□□□ -0.69
UBR1-205ENST00000564540 TRMT44Q8IYL2 757 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms