RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 KRT27Q7Z3Y8 459 aa21.53■■□□□ 1.04
SCAMP2-205ENST00000564529 USP47Q96K76 1375 aa21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 SAFB2Q14151 953 aaKnown RBP eCLIP21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 TESK2Q96S53 571 aa21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 ADGRB2O60241 1585 aa21.52■■□□□ 1.04
SCAMP2-205ENST00000564529 PLCH1Q4KWH8 1693 aa21.51■■□□□ 1.03
SCAMP2-205ENST00000564529 FAM83GA6ND36 823 aa21.51■■□□□ 1.03
SCAMP2-205ENST00000564529 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
SCAMP2-205ENST00000564529 NWD2Q9ULI1 1742 aa21.5■■□□□ 1.03
SCAMP2-205ENST00000564529 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
SCAMP2-205ENST00000564529 ARHGEF10O15013 1369 aa21.49■■□□□ 1.03
SCAMP2-205ENST00000564529 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
SCAMP2-205ENST00000564529 PMFBP1Q8TBY8 1022 aa21.48■■□□□ 1.03
SCAMP2-205ENST00000564529 PUS7Q96PZ0 661 aaKnown RBP21.48■■□□□ 1.03
SCAMP2-205ENST00000564529 ABCA3Q99758 1704 aa21.47■■□□□ 1.03
SCAMP2-205ENST00000564529 A0A0G2JS52 829 aa21.46■■□□□ 1.03
SCAMP2-205ENST00000564529 MYT1Q01538 1121 aa21.46■■□□□ 1.03
SCAMP2-205ENST00000564529 HIRIP3Q9BW71 556 aaPredicted RBP21.46■■□□□ 1.03
SCAMP2-205ENST00000564529 PSDA5PKW4 1024 aaPredicted RBP21.45■■□□□ 1.02
SCAMP2-205ENST00000564529 FAM98CQ17RN3 349 aaKnown RBP21.45■■□□□ 1.02
SCAMP2-205ENST00000564529 CDK19Q9BWU1 502 aa21.45■■□□□ 1.02
SCAMP2-205ENST00000564529 LRP5O75197 1615 aa21.44■■□□□ 1.02
SCAMP2-205ENST00000564529 BAG6P46379 1132 aa21.44■■□□□ 1.02
SCAMP2-205ENST00000564529 EVC2Q86UK5 1308 aa21.44■■□□□ 1.02
SCAMP2-205ENST00000564529 ANKARQ7Z5J8 1434 aa21.44■■□□□ 1.02
SCAMP2-205ENST00000564529 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
SCAMP2-205ENST00000564529 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
SCAMP2-205ENST00000564529 QRICH2Q9H0J4 1663 aa21.42■■□□□ 1.02
SCAMP2-205ENST00000564529 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
SCAMP2-205ENST00000564529 NRAPQ86VF7 1730 aa21.4■■□□□ 1.02
SCAMP2-205ENST00000564529 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.02
SCAMP2-205ENST00000564529 EN1Q05925 392 aaPredicted RBP21.39■■□□□ 1.01
SCAMP2-205ENST00000564529 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
SCAMP2-205ENST00000564529 NUDT16Q96DE0 195 aaKnown RBP21.39■■□□□ 1.01
SCAMP2-205ENST00000564529 CCDC61Q9Y6R9 512 aa21.38■■□□□ 1.01
SCAMP2-205ENST00000564529 TRPM3Q9HCF6 1732 aaPredicted RBP21.38■■□□□ 1.01
SCAMP2-205ENST00000564529 TMF1P82094 1093 aa21.37■■□□□ 1.01
SCAMP2-205ENST00000564529 SPATA31A5Q5VU36 1347 aa21.36■■□□□ 1.01
SCAMP2-205ENST00000564529 SPATA31A7Q8IWB4 1347 aa21.36■■□□□ 1.01
SCAMP2-205ENST00000564529 PLEKHG3A1L390 1219 aa21.36■■□□□ 1.01
SCAMP2-205ENST00000564529 CABP2Q9NPB3 220 aa21.36■■□□□ 1.01
SCAMP2-205ENST00000564529 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
SCAMP2-205ENST00000564529 ALS2Q96Q42 1657 aa21.35■■□□□ 1.01
SCAMP2-205ENST00000564529 ATP7BP35670 1465 aa21.35■■□□□ 1.01
SCAMP2-205ENST00000564529 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
SCAMP2-205ENST00000564529 CDCA8Q53HL2 280 aa21.34■■□□□ 1.01
SCAMP2-205ENST00000564529 R3HDM1Q15032 1099 aaKnown RBP21.33■■□□□ 1.01
SCAMP2-205ENST00000564529 PAK3O75914 559 aaPredicted RBP21.31■■□□□ 1
SCAMP2-205ENST00000564529 RGPD1P0DJD0 1748 aa21.31■■□□□ 1
SCAMP2-205ENST00000564529 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
SCAMP2-205ENST00000564529 PRDM11Q9NQV5 511 aa21.3■■□□□ 1
SCAMP2-205ENST00000564529 DISP2A7MBM2 1401 aa21.29■■□□□ 1
SCAMP2-205ENST00000564529 THSD7AQ9UPZ6 1657 aa21.29■■□□□ 1
SCAMP2-205ENST00000564529 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
SCAMP2-205ENST00000564529 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
SCAMP2-205ENST00000564529 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
SCAMP2-205ENST00000564529 CABP1Q9NZU7 370 aa21.28■■□□□ 1
SCAMP2-205ENST00000564529 CRYBG1Q9Y4K1 1723 aa21.27■■□□□ 1
SCAMP2-205ENST00000564529 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
SCAMP2-205ENST00000564529 SPATA31A1Q5TZJ5 1347 aa21.27■□□□□ 0.99
SCAMP2-205ENST00000564529 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
SCAMP2-205ENST00000564529 TNS1Q9HBL0 1735 aaKnown RBP21.26■□□□□ 0.99
SCAMP2-205ENST00000564529 KIAA0232Q92628 1395 aa21.25■□□□□ 0.99
SCAMP2-205ENST00000564529 TOPAZ1Q8N9V7 1692 aa21.25■□□□□ 0.99
SCAMP2-205ENST00000564529 TRIM37O94972 964 aa21.25■□□□□ 0.99
SCAMP2-205ENST00000564529 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
SCAMP2-205ENST00000564529 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
SCAMP2-205ENST00000564529 FAM196AQ6ZSG2 479 aa21.24■□□□□ 0.99
SCAMP2-205ENST00000564529 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
SCAMP2-205ENST00000564529 STRN4Q9NRL3 753 aa21.24■□□□□ 0.99
SCAMP2-205ENST00000564529 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
SCAMP2-205ENST00000564529 ACEP12821 1306 aa21.23■□□□□ 0.99
SCAMP2-205ENST00000564529 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
SCAMP2-205ENST00000564529 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
SCAMP2-205ENST00000564529 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
SCAMP2-205ENST00000564529 APBA3O96018 575 aa21.21■□□□□ 0.99
SCAMP2-205ENST00000564529 ZC3H6P61129 1189 aaKnown RBP21.21■□□□□ 0.99
SCAMP2-205ENST00000564529 NUTM2GQ5VZR2 741 aa21.2■□□□□ 0.98
SCAMP2-205ENST00000564529 USP35Q9P2H5 1018 aa21.19■□□□□ 0.98
SCAMP2-205ENST00000564529 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
SCAMP2-205ENST00000564529 CD163L1Q9NR16 1453 aa21.19■□□□□ 0.98
SCAMP2-205ENST00000564529 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
SCAMP2-205ENST00000564529 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
SCAMP2-205ENST00000564529 PHRF1Q9P1Y6 1649 aaKnown RBP21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 EVA1CP58658 441 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
SCAMP2-205ENST00000564529 ANKRD36BQ8N2N9 1353 aa21.15■□□□□ 0.98
SCAMP2-205ENST00000564529 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
SCAMP2-205ENST00000564529 USP6P35125 1406 aa21.14■□□□□ 0.98
SCAMP2-205ENST00000564529 HDGFL2Q7Z4V5 671 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-205ENST00000564529 LARP1Q6PKG0 1096 aaKnown RBP21.13■□□□□ 0.97
SCAMP2-205ENST00000564529 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
SCAMP2-205ENST00000564529 A0A1W2PP64 1363 aa21.11■□□□□ 0.97
SCAMP2-205ENST00000564529 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms