RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 POLR3AO14802 1390 aaPredicted RBP36.19■■■■□ 3.38
AC009041.3-201ENST00000564390 CABP2Q9NPB3 220 aa36.19■■■■□ 3.38
AC009041.3-201ENST00000564390 ACEP12821 1306 aa36.18■■■■□ 3.38
AC009041.3-201ENST00000564390 PPIP5K1Q6PFW1 1433 aa36.17■■■■□ 3.38
AC009041.3-201ENST00000564390 UNC5CLQ8IV45 518 aa36.15■■■■□ 3.38
AC009041.3-201ENST00000564390 NWD2Q9ULI1 1742 aa36.14■■■■□ 3.38
AC009041.3-201ENST00000564390 PLEKHG3A1L390 1219 aa36.13■■■■□ 3.37
AC009041.3-201ENST00000564390 GLI3P10071 1580 aa36.12■■■■□ 3.37
AC009041.3-201ENST00000564390 RALGAPBQ86X10 1494 aa36.11■■■■□ 3.37
AC009041.3-201ENST00000564390 UPF1Q92900 1129 aaKnown RBP eCLIP36.11■■■■□ 3.37
AC009041.3-201ENST00000564390 PHRF1Q9P1Y6 1649 aaKnown RBP36.11■■■■□ 3.37
AC009041.3-201ENST00000564390 GJD4Q96KN9 370 aaPredicted RBP36.09■■■■□ 3.37
AC009041.3-201ENST00000564390 FAM83GA6ND36 823 aa36.08■■■■□ 3.37
AC009041.3-201ENST00000564390 NUTM2GQ5VZR2 741 aa36.08■■■■□ 3.37
AC009041.3-201ENST00000564390 EVC2Q86UK5 1308 aa36.08■■■■□ 3.37
AC009041.3-201ENST00000564390 NRAPQ86VF7 1730 aa36.07■■■■□ 3.36
AC009041.3-201ENST00000564390 COL14A1Q05707 1796 aaKnown RBP36.07■■■■□ 3.36
AC009041.3-201ENST00000564390 CARD11Q9BXL7 1154 aa36.05■■■■□ 3.36
AC009041.3-201ENST00000564390 CABP1Q9NZU7 370 aa36.02■■■■□ 3.36
AC009041.3-201ENST00000564390 VPS72Q15906 364 aa35.99■■■■□ 3.35
AC009041.3-201ENST00000564390 CCDC9Q9Y3X0 531 aaKnown RBP35.99■■■■□ 3.35
AC009041.3-201ENST00000564390 NRKQ7Z2Y5 1582 aa35.98■■■■□ 3.35
AC009041.3-201ENST00000564390 BTG4Q9NY30 223 aa35.98■■■■□ 3.35
AC009041.3-201ENST00000564390 ATAD2Q6PL18 1390 aa35.97■■■■□ 3.35
AC009041.3-201ENST00000564390 USP6P35125 1406 aa35.97■■■■□ 3.35
AC009041.3-201ENST00000564390 ABTB2Q8N961 1025 aa35.96■■■■□ 3.35
AC009041.3-201ENST00000564390 PRDM11Q9NQV5 511 aa35.96■■■■□ 3.35
AC009041.3-201ENST00000564390 KIAA0232Q92628 1395 aa35.96■■■■□ 3.35
AC009041.3-201ENST00000564390 SBNO2Q9Y2G9 1366 aa35.93■■■■□ 3.34
AC009041.3-201ENST00000564390 ZC3H6P61129 1189 aaKnown RBP35.92■■■■□ 3.34
AC009041.3-201ENST00000564390 BRWD3Q6RI45 1802 aa35.92■■■■□ 3.34
AC009041.3-201ENST00000564390 CHRNA2Q15822 529 aa35.91■■■■□ 3.34
AC009041.3-201ENST00000564390 AKAP12Q02952 1782 aa35.91■■■■□ 3.34
AC009041.3-201ENST00000564390 USP19O94966 1318 aa35.9■■■■□ 3.34
AC009041.3-201ENST00000564390 PIK3C2AO00443 1686 aa35.88■■■■□ 3.33
AC009041.3-201ENST00000564390 BRD4O60885 1362 aaPredicted RBP35.88■■■■□ 3.33
AC009041.3-201ENST00000564390 PCGF6Q9BYE7 350 aa35.87■■■■□ 3.33
AC009041.3-201ENST00000564390 SSH2Q76I76 1423 aa35.86■■■■□ 3.33
AC009041.3-201ENST00000564390 SEPT12Q8IYM1 358 aa35.85■■■■□ 3.33
AC009041.3-201ENST00000564390 NLRP13Q86W25 1043 aa35.84■■■■□ 3.33
AC009041.3-201ENST00000564390 EP400Q96L91 3159 aa35.82■■■■□ 3.32
AC009041.3-201ENST00000564390 A0A0G2JS52 829 aa35.8■■■■□ 3.32
AC009041.3-201ENST00000564390 MYT1Q01538 1121 aa35.8■■■■□ 3.32
AC009041.3-201ENST00000564390 FAM98CQ17RN3 349 aaKnown RBP35.8■■■■□ 3.32
AC009041.3-201ENST00000564390 LMO7Q8WWI1 1683 aa35.8■■■■□ 3.32
AC009041.3-201ENST00000564390 MON2Q7Z3U7 1717 aa35.8■■■■□ 3.32
AC009041.3-201ENST00000564390 SLIT3O75094 1523 aa35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 NLRP6P59044 892 aa35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 STRN4Q9NRL3 753 aa35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 CPSF1Q10570 1443 aaKnown RBP35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 SPATA31A5Q5VU36 1347 aa35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 SPATA31A7Q8IWB4 1347 aa35.79■■■■□ 3.32
AC009041.3-201ENST00000564390 CPDO75976 1380 aa35.78■■■■□ 3.32
AC009041.3-201ENST00000564390 GCP02774 474 aa35.78■■■■□ 3.32
AC009041.3-201ENST00000564390 ONECUT3O60422 494 aaPredicted RBP35.77■■■■□ 3.32
AC009041.3-201ENST00000564390 CAMTA1Q9Y6Y1 1673 aa35.77■■■■□ 3.32
AC009041.3-201ENST00000564390 KTN1Q86UP2 1357 aaKnown RBP35.76■■■■□ 3.32
AC009041.3-201ENST00000564390 TTC21BQ7Z4L5 1316 aa35.76■■■■□ 3.31
AC009041.3-201ENST00000564390 ZNF692Q9BU19 519 aaPredicted RBP35.75■■■■□ 3.31
AC009041.3-201ENST00000564390 ST20-MTHFSA0A0A6YYL1 179 aa35.74■■■■□ 3.31
AC009041.3-201ENST00000564390 CD163L1Q9NR16 1453 aa35.73■■■■□ 3.31
AC009041.3-201ENST00000564390 THSD7AQ9UPZ6 1657 aa35.73■■■■□ 3.31
AC009041.3-201ENST00000564390 ZBTB7CA1YPR0 619 aa35.73■■■■□ 3.31
AC009041.3-201ENST00000564390 TMC1Q8TDI8 760 aa35.72■■■■□ 3.31
AC009041.3-201ENST00000564390 TESK2Q96S53 571 aa35.71■■■■□ 3.31
AC009041.3-201ENST00000564390 KRT27Q7Z3Y8 459 aa35.7■■■■□ 3.31
AC009041.3-201ENST00000564390 SPATA31A1Q5TZJ5 1347 aa35.69■■■■□ 3.3
AC009041.3-201ENST00000564390 TTC21AQ8NDW8 1320 aa35.69■■■■□ 3.3
AC009041.3-201ENST00000564390 USP47Q96K76 1375 aa35.67■■■■□ 3.3
AC009041.3-201ENST00000564390 CLSPNQ9HAW4 1339 aa35.67■■■■□ 3.3
AC009041.3-201ENST00000564390 EVA1CP58658 441 aa35.67■■■■□ 3.3
AC009041.3-201ENST00000564390 SLC12A5Q9H2X9 1139 aa35.66■■■■□ 3.3
AC009041.3-201ENST00000564390 COL5A2P05997 1499 aaPredicted RBP35.66■■■■□ 3.3
AC009041.3-201ENST00000564390 USP35Q9P2H5 1018 aa35.65■■■■□ 3.3
AC009041.3-201ENST00000564390 SOX12O15370 315 aa35.64■■■■□ 3.3
AC009041.3-201ENST00000564390 LARP1Q6PKG0 1096 aaKnown RBP35.64■■■■□ 3.3
AC009041.3-201ENST00000564390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.64■■■■□ 3.3
AC009041.3-201ENST00000564390 BLMP54132 1417 aaPredicted RBP35.62■■■■□ 3.29
AC009041.3-201ENST00000564390 A0A1W2PP64 1363 aa35.62■■■■□ 3.29
AC009041.3-201ENST00000564390 HDGFL2Q7Z4V5 671 aaPredicted RBP35.61■■■■□ 3.29
AC009041.3-201ENST00000564390 ZRANB1Q9UGI0 708 aa35.61■■■■□ 3.29
AC009041.3-201ENST00000564390 NFAT5O94916 1531 aa35.61■■■■□ 3.29
AC009041.3-201ENST00000564390 COL18A1P39060 1754 aa35.61■■■■□ 3.29
AC009041.3-201ENST00000564390 AATKQ6ZMQ8 1374 aa35.6■■■■□ 3.29
AC009041.3-201ENST00000564390 CCDC125Q86Z20 511 aa35.59■■■■□ 3.29
AC009041.3-201ENST00000564390 USP54Q70EL1 1684 aa35.59■■■■□ 3.29
AC009041.3-201ENST00000564390 FAM182BQ5T319 152 aa35.58■■■■□ 3.29
AC009041.3-201ENST00000564390 NME9Q86XW9 330 aa35.58■■■■□ 3.29
AC009041.3-201ENST00000564390 PUS7Q96PZ0 661 aaKnown RBP35.58■■■■□ 3.29
AC009041.3-201ENST00000564390 EDC4Q6P2E9 1401 aaKnown RBP35.57■■■■□ 3.29
AC009041.3-201ENST00000564390 TIMELESSQ9UNS1 1208 aa35.57■■■■□ 3.28
AC009041.3-201ENST00000564390 KCNH5Q8NCM2 988 aa35.55■■■■□ 3.28
AC009041.3-201ENST00000564390 CCER1Q8TC90 406 aaPredicted RBP35.55■■■■□ 3.28
AC009041.3-201ENST00000564390 TERF2IPQ9NYB0 399 aa35.55■■■■□ 3.28
AC009041.3-201ENST00000564390 RGPD5Q99666 1765 aa35.53■■■■□ 3.28
AC009041.3-201ENST00000564390 USP31Q70CQ4 1352 aa35.52■■■■□ 3.28
AC009041.3-201ENST00000564390 CRB1P82279 1406 aa35.52■■■■□ 3.28
AC009041.3-201ENST00000564390 ARHGEF25Q86VW2 580 aa35.52■■■■□ 3.28
AC009041.3-201ENST00000564390 NINLQ9Y2I6 1382 aa35.51■■■■□ 3.28
AC009041.3-201ENST00000564390 TCP11L2Q8N4U5 519 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms