RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TOPAZ1Q8N9V7 1692 aa34.65■■■■□ 3.14
NME3-206ENST00000564252 SEPT12Q8IYM1 358 aa34.64■■■■□ 3.14
NME3-206ENST00000564252 CCDC9Q9Y3X0 531 aaKnown RBP34.64■■■■□ 3.14
NME3-206ENST00000564252 ONECUT3O60422 494 aaPredicted RBP34.63■■■■□ 3.13
NME3-206ENST00000564252 PAK3O75914 559 aaPredicted RBP34.63■■■■□ 3.13
NME3-206ENST00000564252 BTG4Q9NY30 223 aa34.61■■■■□ 3.13
NME3-206ENST00000564252 POLR3AO14802 1390 aaPredicted RBP34.59■■■■□ 3.13
NME3-206ENST00000564252 SRCAPQ6ZRS2 3230 aa34.58■■■■□ 3.13
NME3-206ENST00000564252 BLMP54132 1417 aaPredicted RBP34.57■■■■□ 3.13
NME3-206ENST00000564252 CCDC61Q9Y6R9 512 aa34.55■■■■□ 3.12
NME3-206ENST00000564252 PHRF1Q9P1Y6 1649 aaKnown RBP34.54■■■■□ 3.12
NME3-206ENST00000564252 ACEP12821 1306 aa34.54■■■■□ 3.12
NME3-206ENST00000564252 PLEKHG3A1L390 1219 aa34.52■■■■□ 3.12
NME3-206ENST00000564252 NBPF8Q3BBV2 869 aa34.51■■■■□ 3.12
NME3-206ENST00000564252 KRT27Q7Z3Y8 459 aa34.51■■■■□ 3.12
NME3-206ENST00000564252 CENPJQ9HC77 1338 aaPredicted RBP34.51■■■■□ 3.11
NME3-206ENST00000564252 FAM98CQ17RN3 349 aaKnown RBP34.5■■■■□ 3.11
NME3-206ENST00000564252 PRDM11Q9NQV5 511 aa34.5■■■■□ 3.11
NME3-206ENST00000564252 L3MBTL2Q969R5 705 aa34.49■■■■□ 3.11
NME3-206ENST00000564252 ZRANB1Q9UGI0 708 aa34.49■■■■□ 3.11
NME3-206ENST00000564252 KIAA0232Q92628 1395 aa34.48■■■■□ 3.11
NME3-206ENST00000564252 SPATA31A5Q5VU36 1347 aa34.47■■■■□ 3.11
NME3-206ENST00000564252 SPATA31A7Q8IWB4 1347 aa34.47■■■■□ 3.11
NME3-206ENST00000564252 QRICH2Q9H0J4 1663 aa34.47■■■■□ 3.11
NME3-206ENST00000564252 A0A0G2JS52 829 aa34.45■■■■□ 3.11
NME3-206ENST00000564252 MYT1Q01538 1121 aa34.45■■■■□ 3.11
NME3-206ENST00000564252 NUTM2GQ5VZR2 741 aa34.45■■■■□ 3.11
NME3-206ENST00000564252 SRPK2P78362 688 aaKnown RBP34.44■■■■□ 3.1
NME3-206ENST00000564252 PPIP5K1Q6PFW1 1433 aa34.44■■■■□ 3.1
NME3-206ENST00000564252 SIN3AQ96ST3 1273 aa34.43■■■■□ 3.1
NME3-206ENST00000564252 CHRNA2Q15822 529 aa34.42■■■■□ 3.1
NME3-206ENST00000564252 DEFB132Q7Z7B7 95 aa34.42■■■■□ 3.1
NME3-206ENST00000564252 THSD7AQ9UPZ6 1657 aa34.41■■■■□ 3.1
NME3-206ENST00000564252 TRPM1Q7Z4N2 1603 aa34.41■■■■□ 3.1
NME3-206ENST00000564252 NRKQ7Z2Y5 1582 aa34.41■■■■□ 3.1
NME3-206ENST00000564252 CABP2Q9NPB3 220 aa34.41■■■■□ 3.1
NME3-206ENST00000564252 ZC3H6P61129 1189 aaKnown RBP34.4■■■■□ 3.1
NME3-206ENST00000564252 SF3B2Q13435 895 aaKnown RBP34.4■■■■□ 3.1
NME3-206ENST00000564252 ABTB2Q8N961 1025 aa34.38■■■■□ 3.09
NME3-206ENST00000564252 USP19O94966 1318 aa34.36■■■■□ 3.09
NME3-206ENST00000564252 SPATA31A1Q5TZJ5 1347 aa34.36■■■■□ 3.09
NME3-206ENST00000564252 NEUROD1Q13562 356 aa34.33■■■■□ 3.09
NME3-206ENST00000564252 STRN4Q9NRL3 753 aa34.32■■■■□ 3.08
NME3-206ENST00000564252 BRD4O60885 1362 aaPredicted RBP34.32■■■■□ 3.08
NME3-206ENST00000564252 CPDO75976 1380 aa34.32■■■■□ 3.08
NME3-206ENST00000564252 LMO7Q8WWI1 1683 aa34.31■■■■□ 3.08
NME3-206ENST00000564252 CABP1Q9NZU7 370 aa34.3■■■■□ 3.08
NME3-206ENST00000564252 CAMTA1Q9Y6Y1 1673 aa34.3■■■■□ 3.08
NME3-206ENST00000564252 FAM182BQ5T319 152 aa34.29■■■■□ 3.08
NME3-206ENST00000564252 NLRP13Q86W25 1043 aa34.29■■■■□ 3.08
NME3-206ENST00000564252 USP6P35125 1406 aa34.29■■■■□ 3.08
NME3-206ENST00000564252 SSH2Q76I76 1423 aa34.29■■■■□ 3.08
NME3-206ENST00000564252 ROCK2O75116 1388 aaKnown RBP34.28■■■■□ 3.08
NME3-206ENST00000564252 RGPD1P0DJD0 1748 aa34.27■■■■□ 3.08
NME3-206ENST00000564252 EVC2Q86UK5 1308 aa34.27■■■■□ 3.08
NME3-206ENST00000564252 GCP02774 474 aa34.25■■■■□ 3.07
NME3-206ENST00000564252 BAG6P46379 1132 aa34.25■■■■□ 3.07
NME3-206ENST00000564252 EVA1CP58658 441 aa34.23■■■■□ 3.07
NME3-206ENST00000564252 LARP1Q6PKG0 1096 aaKnown RBP34.21■■■■□ 3.07
NME3-206ENST00000564252 USP35Q9P2H5 1018 aa34.21■■■■□ 3.07
NME3-206ENST00000564252 SLIT3O75094 1523 aa34.2■■■■□ 3.07
NME3-206ENST00000564252 BARGINQ6ZT62 677 aa34.2■■■■□ 3.07
NME3-206ENST00000564252 TNS1Q9HBL0 1735 aaKnown RBP34.2■■■■□ 3.07
NME3-206ENST00000564252 PIK3C2AO00443 1686 aa34.19■■■■□ 3.06
NME3-206ENST00000564252 COL5A2P05997 1499 aaPredicted RBP34.17■■■■□ 3.06
NME3-206ENST00000564252 NLRP6P59044 892 aa34.17■■■■□ 3.06
NME3-206ENST00000564252 DISP2A7MBM2 1401 aa34.16■■■■□ 3.06
NME3-206ENST00000564252 EN1Q05925 392 aaPredicted RBP34.15■■■■□ 3.06
NME3-206ENST00000564252 AKAP12Q02952 1782 aa34.14■■■■□ 3.06
NME3-206ENST00000564252 TCP11L2Q8N4U5 519 aa34.14■■■■□ 3.06
NME3-206ENST00000564252 FAM196AQ6ZSG2 479 aa34.13■■■■□ 3.05
NME3-206ENST00000564252 AATKQ6ZMQ8 1374 aa34.11■■■■□ 3.05
NME3-206ENST00000564252 ZNF692Q9BU19 519 aaPredicted RBP34.1■■■■□ 3.05
NME3-206ENST00000564252 THRAP3Q9Y2W1 955 aaKnown RBP34.1■■■■□ 3.05
NME3-206ENST00000564252 TTC21BQ7Z4L5 1316 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 CRB1P82279 1406 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 CPSF1Q10570 1443 aaKnown RBP34.08■■■■□ 3.05
NME3-206ENST00000564252 ZBTB7CA1YPR0 619 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 PDE3BQ13370 1112 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 SBNO2Q9Y2G9 1366 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 COL18A1P39060 1754 aa34.08■■■■□ 3.05
NME3-206ENST00000564252 TRIM37O94972 964 aa34.07■■■■□ 3.04
NME3-206ENST00000564252 PARP4Q9UKK3 1724 aaKnown RBP34.07■■■■□ 3.04
NME3-206ENST00000564252 PSDA5PKW4 1024 aaPredicted RBP34.05■■■■□ 3.04
NME3-206ENST00000564252 LRP5O75197 1615 aa34.04■■■■□ 3.04
NME3-206ENST00000564252 EZH2Q15910 746 aaKnown RBP34.03■■■■□ 3.04
NME3-206ENST00000564252 CARD11Q9BXL7 1154 aa34.03■■■■□ 3.04
NME3-206ENST00000564252 TTC21AQ8NDW8 1320 aa34.03■■■■□ 3.04
NME3-206ENST00000564252 CAMKK2Q96RR4 588 aa34.02■■■■□ 3.04
NME3-206ENST00000564252 MON2Q7Z3U7 1717 aa34.01■■■■□ 3.03
NME3-206ENST00000564252 KTN1Q86UP2 1357 aaKnown RBP34■■■■□ 3.03
NME3-206ENST00000564252 TONSLQ96HA7 1378 aa33.99■■■■□ 3.03
NME3-206ENST00000564252 ARHGEF25Q86VW2 580 aa33.99■■■■□ 3.03
NME3-206ENST00000564252 AXIN2Q9Y2T1 843 aa33.99■■■■□ 3.03
NME3-206ENST00000564252 APBA3O96018 575 aa33.98■■■■□ 3.03
NME3-206ENST00000564252 KCNH5Q8NCM2 988 aa33.98■■■■□ 3.03
NME3-206ENST00000564252 NFAT5O94916 1531 aa33.96■■■■□ 3.03
NME3-206ENST00000564252 PARD3Q8TEW0 1356 aa33.96■■■■□ 3.03
NME3-206ENST00000564252 LRRC37A3O60309 1634 aa33.95■■■■□ 3.03
NME3-206ENST00000564252 TOM1L2Q6ZVM7 507 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms