RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 SMC3Q9UQE7 1217 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 DYNC1I1O14576 645 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 BIRC2Q13490 618 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 CT47A1Q5JQC4 288 aaPredicted RBP7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 CEP126Q9P2H0 1117 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 KIAA0586Q9BVV6 1533 aa7.25□□□□□ -1.25
TUBGCP4-207ENST00000563963 PPP4R3CPQ6ZMV5 832 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 DCAF11Q8TEB1 546 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 PPP1R12AO14974 1030 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 RHBDL3P58872 404 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 UPF2Q9HAU5 1272 aaKnown RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 KDM6BO15054 1643 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 ERCC4Q92889 916 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 KIF16BQ96L93 1317 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 TNNT1P13805 278 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 HELBQ8NG08 1087 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 CCDC85AQ96PX6 553 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 ATP1B4Q9UN42 357 aaPredicted RBP7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 DIP2BQ9P265 1576 aa7.24□□□□□ -1.25
TUBGCP4-207ENST00000563963 TDRD9Q8NDG6 1382 aaKnown RBP7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 ERBB3P21860 1342 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 SF3A1Q15459 793 aaKnown RBP7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 ZBTB9Q96C00 473 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 TMCO5BA8MYB1 307 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 NEXNQ0ZGT2 675 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 SUGT1Q9Y2Z0 365 aa7.23□□□□□ -1.25
TUBGCP4-207ENST00000563963 UHRF1BP1LA0JNW5 1464 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 PLB1Q6P1J6 1458 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 ERICH4A6NGS2 130 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 CASQ1P31415 396 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 MFSD4BQ5TF39 518 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 CLIP1P30622 1438 aa7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
TUBGCP4-207ENST00000563963 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.25
TUBGCP4-207ENST00000563963 ISY1Q9ULR0 285 aaKnown RBP7.21□□□□□ -1.25
TUBGCP4-207ENST00000563963 SMAPO00193 183 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 ABCD1P33897 745 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 STK24Q9Y6E0 443 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 CREB3O43889 395 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 PAX3P23760 479 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 KCNA1Q09470 495 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 UVSSAQ2YD98 709 aa7.21□□□□□ -1.26
TUBGCP4-207ENST00000563963 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 CCDC91Q7Z6B0 441 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 MED4Q9NPJ6 270 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 CWC15Q9P013 229 aaKnown RBP7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 ABCF2Q9UG63 623 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 PAX7P23759 505 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 DEF6Q9H4E7 631 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 HTATSF1O43719 755 aaKnown RBP7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 RPS6KL1Q9Y6S9 549 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 WDHD1O75717 1129 aaPredicted RBP7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 HSCBQ8IWL3 235 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
TUBGCP4-207ENST00000563963 VPS8Q8N3P4 1428 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 HSP90B2PQ58FF3 399 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 CHCHD3Q9NX63 227 aaKnown RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 SYNPO2Q9UMS6 1093 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 CARMIL2Q6F5E8 1435 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 RBM33Q96EV2 1170 aaKnown RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 RPGRIP1LQ68CZ1 1315 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 PSMC1P62191 440 aaKnown RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 ICE2Q659A1 982 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 KCNV2Q8TDN2 545 aa7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 NOL10Q9BSC4 688 aaKnown RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 TPX2Q9ULW0 747 aaKnown RBP7.19□□□□□ -1.26
TUBGCP4-207ENST00000563963 COPB2P35606 906 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 TRDNQ13061 729 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 EVI5LQ96CN4 794 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 KLHL33A6NCF5 533 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 COQ9O75208 318 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 HSPA5P11021 654 aaKnown RBP7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 JMYQ8N9B5 988 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 PRG4Q92954 1404 aaPredicted RBP7.18□□□□□ -1.26
TUBGCP4-207ENST00000563963 OFD1O75665 1012 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 CCDC175P0C221 793 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 PEX19P40855 299 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 CDC37Q16543 378 aaPredicted RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 GOPCQ9HD26 462 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 UQCRHLA0A096LP55 91 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 PPFIA4O75335 1185 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 UQCRHP07919 91 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 CBX1P83916 185 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 SNRNP27Q8WVK2 155 aaKnown RBP7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 PHLDB1Q86UU1 1377 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 HMMRO75330 724 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
TUBGCP4-207ENST00000563963 EIF3JO75822 258 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms