RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 ABCA3Q99758 1704 aa30.44■■■□□ 2.46
HERC2-204ENST00000563945 PRDM11Q9NQV5 511 aa30.42■■■□□ 2.46
HERC2-204ENST00000563945 NUDT16Q96DE0 195 aaKnown RBP30.41■■■□□ 2.46
HERC2-204ENST00000563945 TRPM3Q9HCF6 1732 aaPredicted RBP30.39■■■□□ 2.46
HERC2-204ENST00000563945 BAG6P46379 1132 aa30.39■■■□□ 2.46
HERC2-204ENST00000563945 COL14A1Q05707 1796 aaKnown RBP30.37■■■□□ 2.45
HERC2-204ENST00000563945 CDK19Q9BWU1 502 aa30.36■■■□□ 2.45
HERC2-204ENST00000563945 ALS2Q96Q42 1657 aa30.36■■■□□ 2.45
HERC2-204ENST00000563945 SPATA31A5Q5VU36 1347 aa30.34■■■□□ 2.45
HERC2-204ENST00000563945 SPATA31A7Q8IWB4 1347 aa30.34■■■□□ 2.45
HERC2-204ENST00000563945 SRCAPQ6ZRS2 3230 aa30.32■■■□□ 2.44
HERC2-204ENST00000563945 STRN4Q9NRL3 753 aa30.3■■■□□ 2.44
HERC2-204ENST00000563945 CCDC61Q9Y6R9 512 aa30.3■■■□□ 2.44
HERC2-204ENST00000563945 ITSN1Q15811 1721 aa30.3■■■□□ 2.44
HERC2-204ENST00000563945 NRAPQ86VF7 1730 aa30.3■■■□□ 2.44
HERC2-204ENST00000563945 NUTM2GQ5VZR2 741 aa30.29■■■□□ 2.44
HERC2-204ENST00000563945 ARHGEF28Q8N1W1 1705 aaKnown RBP30.28■■■□□ 2.44
HERC2-204ENST00000563945 ATP7BP35670 1465 aa30.28■■■□□ 2.44
HERC2-204ENST00000563945 ZC3H6P61129 1189 aaKnown RBP30.28■■■□□ 2.44
HERC2-204ENST00000563945 CHRNA2Q15822 529 aa30.28■■■□□ 2.44
HERC2-204ENST00000563945 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
HERC2-204ENST00000563945 EVA1CP58658 441 aa30.27■■■□□ 2.44
HERC2-204ENST00000563945 NBPF8Q3BBV2 869 aa30.27■■■□□ 2.44
HERC2-204ENST00000563945 ACEP12821 1306 aa30.26■■■□□ 2.44
HERC2-204ENST00000563945 FAM182BQ5T319 152 aa30.26■■■□□ 2.43
HERC2-204ENST00000563945 EN1Q05925 392 aaPredicted RBP30.23■■■□□ 2.43
HERC2-204ENST00000563945 ABTB2Q8N961 1025 aa30.23■■■□□ 2.43
HERC2-204ENST00000563945 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
HERC2-204ENST00000563945 PLEKHG3A1L390 1219 aa30.22■■■□□ 2.43
HERC2-204ENST00000563945 PSDA5PKW4 1024 aaPredicted RBP30.22■■■□□ 2.43
HERC2-204ENST00000563945 SRPK2P78362 688 aaKnown RBP30.22■■■□□ 2.43
HERC2-204ENST00000563945 POLR3AO14802 1390 aaPredicted RBP30.2■■■□□ 2.43
HERC2-204ENST00000563945 USP35Q9P2H5 1018 aa30.2■■■□□ 2.43
HERC2-204ENST00000563945 NBPF1Q3BBV0 1214 aa30.19■■■□□ 2.42
HERC2-204ENST00000563945 FAM196AQ6ZSG2 479 aa30.18■■■□□ 2.42
HERC2-204ENST00000563945 CRYBG1Q9Y4K1 1723 aa30.18■■■□□ 2.42
HERC2-204ENST00000563945 NLRP13Q86W25 1043 aa30.17■■■□□ 2.42
HERC2-204ENST00000563945 PDE3BQ13370 1112 aa30.16■■■□□ 2.42
HERC2-204ENST00000563945 CENPJQ9HC77 1338 aaPredicted RBP30.16■■■□□ 2.42
HERC2-204ENST00000563945 RGPD1P0DJD0 1748 aa30.15■■■□□ 2.42
HERC2-204ENST00000563945 KIAA1210Q9ULL0 1709 aa30.15■■■□□ 2.42
HERC2-204ENST00000563945 PHRF1Q9P1Y6 1649 aaKnown RBP30.12■■■□□ 2.41
HERC2-204ENST00000563945 TRIM37O94972 964 aa30.12■■■□□ 2.41
HERC2-204ENST00000563945 THSD7AQ9UPZ6 1657 aa30.11■■■□□ 2.41
HERC2-204ENST00000563945 CABP2Q9NPB3 220 aa30.11■■■□□ 2.41
HERC2-204ENST00000563945 R3HDM1Q15032 1099 aaKnown RBP30.1■■■□□ 2.41
HERC2-204ENST00000563945 BARGINQ6ZT62 677 aa30.1■■■□□ 2.41
HERC2-204ENST00000563945 PPIP5K1Q6PFW1 1433 aa30.1■■■□□ 2.41
HERC2-204ENST00000563945 APBA3O96018 575 aa30.09■■■□□ 2.41
HERC2-204ENST00000563945 GCP02774 474 aa30.09■■■□□ 2.41
HERC2-204ENST00000563945 EZH2Q15910 746 aaKnown RBP30.09■■■□□ 2.41
HERC2-204ENST00000563945 SSH2Q76I76 1423 aa30.09■■■□□ 2.41
HERC2-204ENST00000563945 TCP11L2Q8N4U5 519 aa30.09■■■□□ 2.41
HERC2-204ENST00000563945 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
HERC2-204ENST00000563945 LARP1Q6PKG0 1096 aaKnown RBP30.08■■■□□ 2.41
HERC2-204ENST00000563945 CPDO75976 1380 aa30.07■■■□□ 2.4
HERC2-204ENST00000563945 ZBTB7CA1YPR0 619 aa30.07■■■□□ 2.4
HERC2-204ENST00000563945 DISP2A7MBM2 1401 aa30.06■■■□□ 2.4
HERC2-204ENST00000563945 BRD4O60885 1362 aaPredicted RBP30.05■■■□□ 2.4
HERC2-204ENST00000563945 USP19O94966 1318 aa30.05■■■□□ 2.4
HERC2-204ENST00000563945 LRP5O75197 1615 aa30.04■■■□□ 2.4
HERC2-204ENST00000563945 NLRP6P59044 892 aa30.04■■■□□ 2.4
HERC2-204ENST00000563945 CABP1Q9NZU7 370 aa30.04■■■□□ 2.4
HERC2-204ENST00000563945 THRAP3Q9Y2W1 955 aaKnown RBP30.04■■■□□ 2.4
HERC2-204ENST00000563945 CAMKK2Q96RR4 588 aa30.03■■■□□ 2.4
HERC2-204ENST00000563945 CAMTA1Q9Y6Y1 1673 aa30.02■■■□□ 2.4
HERC2-204ENST00000563945 NRKQ7Z2Y5 1582 aa30■■■□□ 2.39
HERC2-204ENST00000563945 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
HERC2-204ENST00000563945 PARD3Q8TEW0 1356 aa30■■■□□ 2.39
HERC2-204ENST00000563945 EVC2Q86UK5 1308 aa29.98■■■□□ 2.39
HERC2-204ENST00000563945 NBPF14Q5TI25 921 aa29.98■■■□□ 2.39
HERC2-204ENST00000563945 TNS1Q9HBL0 1735 aaKnown RBP29.98■■■□□ 2.39
HERC2-204ENST00000563945 C11orf95C9JLR9 678 aaPredicted RBP29.97■■■□□ 2.39
HERC2-204ENST00000563945 USP6P35125 1406 aa29.94■■■□□ 2.38
HERC2-204ENST00000563945 QRICH2Q9H0J4 1663 aa29.94■■■□□ 2.38
HERC2-204ENST00000563945 CRB1P82279 1406 aa29.92■■■□□ 2.38
HERC2-204ENST00000563945 NEUROD1Q13562 356 aa29.92■■■□□ 2.38
HERC2-204ENST00000563945 TOM1L2Q6ZVM7 507 aa29.92■■■□□ 2.38
HERC2-204ENST00000563945 ZNF692Q9BU19 519 aaPredicted RBP29.92■■■□□ 2.38
HERC2-204ENST00000563945 LMO7Q8WWI1 1683 aa29.91■■■□□ 2.38
HERC2-204ENST00000563945 COL5A2P05997 1499 aaPredicted RBP29.91■■■□□ 2.38
HERC2-204ENST00000563945 AATKQ6ZMQ8 1374 aa29.9■■■□□ 2.38
HERC2-204ENST00000563945 SIN3AQ96ST3 1273 aa29.89■■■□□ 2.38
HERC2-204ENST00000563945 ROCK2O75116 1388 aaKnown RBP29.88■■■□□ 2.37
HERC2-204ENST00000563945 DDB1Q16531 1140 aa29.87■■■□□ 2.37
HERC2-204ENST00000563945 KCNH5Q8NCM2 988 aa29.87■■■□□ 2.37
HERC2-204ENST00000563945 CSB-PGBD3P0DP91 1061 aa29.84■■■□□ 2.37
HERC2-204ENST00000563945 TTC21BQ7Z4L5 1316 aa29.83■■■□□ 2.37
HERC2-204ENST00000563945 SOX12O15370 315 aa29.83■■■□□ 2.37
HERC2-204ENST00000563945 OVOS2A0A0G2JMS6 1433 aa29.82■■■□□ 2.36
HERC2-204ENST00000563945 OVOS2A0A0J9YW53 1432 aa29.82■■■□□ 2.36
HERC2-204ENST00000563945 OVOS2Q6IE36 1432 aa29.82■■■□□ 2.36
HERC2-204ENST00000563945 SLIT3O75094 1523 aa29.81■■■□□ 2.36
HERC2-204ENST00000563945 CDCA7Q9BWT1 371 aaPredicted RBP29.81■■■□□ 2.36
HERC2-204ENST00000563945 PARP4Q9UKK3 1724 aaKnown RBP29.81■■■□□ 2.36
HERC2-204ENST00000563945 WDR17Q8IZU2 1322 aa29.8■■■□□ 2.36
HERC2-204ENST00000563945 TTC21AQ8NDW8 1320 aa29.8■■■□□ 2.36
HERC2-204ENST00000563945 AXIN2Q9Y2T1 843 aa29.79■■■□□ 2.36
HERC2-204ENST00000563945 ARHGEF25Q86VW2 580 aa29.78■■■□□ 2.36
HERC2-204ENST00000563945 PPP1R1BQ9UD71 204 aaPredicted RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms