RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 L3MBTL2Q969R5 705 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 ACEP12821 1306 aa10.03□□□□□ -0.8
CDH11-208ENST00000563492 CCDC125Q86Z20 511 aa10.02□□□□□ -0.81
CDH11-208ENST00000563492 PRDM11Q9NQV5 511 aa10.02□□□□□ -0.81
CDH11-208ENST00000563492 ZRANB1Q9UGI0 708 aa10.02□□□□□ -0.81
CDH11-208ENST00000563492 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
CDH11-208ENST00000563492 ATP7BP35670 1465 aa10.02□□□□□ -0.81
CDH11-208ENST00000563492 MARF1Q9Y4F3 1742 aaKnown RBP10.02□□□□□ -0.81
CDH11-208ENST00000563492 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
CDH11-208ENST00000563492 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 STRN4Q9NRL3 753 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 TRPM3Q9HCF6 1732 aaPredicted RBP10.01□□□□□ -0.81
CDH11-208ENST00000563492 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
CDH11-208ENST00000563492 BLMP54132 1417 aaPredicted RBP10□□□□□ -0.81
CDH11-208ENST00000563492 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
CDH11-208ENST00000563492 ABTB2Q8N961 1025 aa9.99□□□□□ -0.81
CDH11-208ENST00000563492 CENPJQ9HC77 1338 aaPredicted RBP9.99□□□□□ -0.81
CDH11-208ENST00000563492 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
CDH11-208ENST00000563492 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.99□□□□□ -0.81
CDH11-208ENST00000563492 CABP1Q9NZU7 370 aa9.98□□□□□ -0.81
CDH11-208ENST00000563492 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
CDH11-208ENST00000563492 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
CDH11-208ENST00000563492 ALS2Q96Q42 1657 aa9.98□□□□□ -0.81
CDH11-208ENST00000563492 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
CDH11-208ENST00000563492 ABCA3Q99758 1704 aa9.98□□□□□ -0.81
CDH11-208ENST00000563492 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
CDH11-208ENST00000563492 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
CDH11-208ENST00000563492 SPATA31A1Q5TZJ5 1347 aa9.97□□□□□ -0.81
CDH11-208ENST00000563492 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.81
CDH11-208ENST00000563492 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
CDH11-208ENST00000563492 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
CDH11-208ENST00000563492 PPIP5K1Q6PFW1 1433 aa9.96□□□□□ -0.82
CDH11-208ENST00000563492 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
CDH11-208ENST00000563492 GCP02774 474 aa9.95□□□□□ -0.82
CDH11-208ENST00000563492 EVA1CP58658 441 aa9.95□□□□□ -0.82
CDH11-208ENST00000563492 USP19O94966 1318 aa9.95□□□□□ -0.82
CDH11-208ENST00000563492 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
CDH11-208ENST00000563492 NWD2Q9ULI1 1742 aa9.94□□□□□ -0.82
CDH11-208ENST00000563492 TRIM37O94972 964 aa9.94□□□□□ -0.82
CDH11-208ENST00000563492 COL14A1Q05707 1796 aaKnown RBP9.93□□□□□ -0.82
CDH11-208ENST00000563492 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
CDH11-208ENST00000563492 BAG6P46379 1132 aa9.93□□□□□ -0.82
CDH11-208ENST00000563492 NLRP6P59044 892 aa9.93□□□□□ -0.82
CDH11-208ENST00000563492 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
CDH11-208ENST00000563492 NLRP13Q86W25 1043 aa9.93□□□□□ -0.82
CDH11-208ENST00000563492 CRYBG1Q9Y4K1 1723 aa9.93□□□□□ -0.82
CDH11-208ENST00000563492 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
CDH11-208ENST00000563492 ROCK2O75116 1388 aaKnown RBP9.91□□□□□ -0.82
CDH11-208ENST00000563492 SOX12O15370 315 aa9.91□□□□□ -0.82
CDH11-208ENST00000563492 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
CDH11-208ENST00000563492 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
CDH11-208ENST00000563492 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
CDH11-208ENST00000563492 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
CDH11-208ENST00000563492 USP6P35125 1406 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 KIAA1210Q9ULL0 1709 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 CPDO75976 1380 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 TOPAZ1Q8N9V7 1692 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 EVC2Q86UK5 1308 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
CDH11-208ENST00000563492 NRKQ7Z2Y5 1582 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 TTC21BQ7Z4L5 1316 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 APBA3O96018 575 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 PTF1AQ7RTS3 328 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 THSD7AQ9UPZ6 1657 aa9.89□□□□□ -0.83
CDH11-208ENST00000563492 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
CDH11-208ENST00000563492 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
CDH11-208ENST00000563492 COL5A2P05997 1499 aaPredicted RBP9.87□□□□□ -0.83
CDH11-208ENST00000563492 ARHGEF25Q86VW2 580 aa9.87□□□□□ -0.83
CDH11-208ENST00000563492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDH11-208ENST00000563492 CARD11Q9BXL7 1154 aa9.87□□□□□ -0.83
CDH11-208ENST00000563492 AATKQ6ZMQ8 1374 aa9.87□□□□□ -0.83
CDH11-208ENST00000563492 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
CDH11-208ENST00000563492 TOM1L2Q6ZVM7 507 aa9.86□□□□□ -0.83
CDH11-208ENST00000563492 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
CDH11-208ENST00000563492 SLC12A5Q9H2X9 1139 aa9.86□□□□□ -0.83
CDH11-208ENST00000563492 LMO7Q8WWI1 1683 aa9.86□□□□□ -0.83
CDH11-208ENST00000563492 BRD4O60885 1362 aaPredicted RBP9.86□□□□□ -0.83
CDH11-208ENST00000563492 TRPM1Q7Z4N2 1603 aa9.85□□□□□ -0.83
CDH11-208ENST00000563492 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
CDH11-208ENST00000563492 NME9Q86XW9 330 aa9.85□□□□□ -0.83
CDH11-208ENST00000563492 TMC1Q8TDI8 760 aa9.85□□□□□ -0.83
CDH11-208ENST00000563492 THRAP3Q9Y2W1 955 aaKnown RBP9.85□□□□□ -0.83
CDH11-208ENST00000563492 DISP2A7MBM2 1401 aa9.84□□□□□ -0.83
CDH11-208ENST00000563492 CRB1P82279 1406 aa9.84□□□□□ -0.83
CDH11-208ENST00000563492 MARCH10Q8NA82 808 aaPredicted RBP9.84□□□□□ -0.83
CDH11-208ENST00000563492 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
CDH11-208ENST00000563492 SLIT3O75094 1523 aa9.83□□□□□ -0.84
CDH11-208ENST00000563492 CSB-PGBD3P0DP91 1061 aa9.83□□□□□ -0.84
CDH11-208ENST00000563492 DDB1Q16531 1140 aa9.83□□□□□ -0.84
CDH11-208ENST00000563492 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
CDH11-208ENST00000563492 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
CDH11-208ENST00000563492 SBNO2Q9Y2G9 1366 aa9.82□□□□□ -0.84
CDH11-208ENST00000563492 PIK3C2AO00443 1686 aa9.82□□□□□ -0.84
CDH11-208ENST00000563492 TTC21AQ8NDW8 1320 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms