RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	PHF8	Q9UPP1	1060 aa		12.57	□□□□□ -0.4
CKLF-208	ENST00000563092	C14orf93	Q9H972	538 aa	Known RBP	12.56	□□□□□ -0.4
CKLF-208	ENST00000563092	BAG6	P46379	1132 aa		12.55	□□□□□ -0.4
CKLF-208	ENST00000563092	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.55	□□□□□ -0.4
CKLF-208	ENST00000563092	REM2	Q8IYK8	340 aa	Predicted RBP	12.55	□□□□□ -0.4
CKLF-208	ENST00000563092	ANKAR	Q7Z5J8	1434 aa		12.54	□□□□□ -0.4
CKLF-208	ENST00000563092	RGPD8	O14715	1765 aa	Predicted RBP	12.54	□□□□□ -0.4
CKLF-208	ENST00000563092	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.54	□□□□□ -0.4
CKLF-208	ENST00000563092	ADGRB2	O60241	1585 aa		12.53	□□□□□ -0.4
CKLF-208	ENST00000563092	PSD	A5PKW4	1024 aa	Predicted RBP	12.53	□□□□□ -0.4
CKLF-208	ENST00000563092	RGL3	Q3MIN7	710 aa		12.53	□□□□□ -0.4
CKLF-208	ENST00000563092	THSD7A	Q9UPZ6	1657 aa		12.53	□□□□□ -0.4
CKLF-208	ENST00000563092	DLC1	Q96QB1	1528 aa		12.52	□□□□□ -0.4
CKLF-208	ENST00000563092	ALS2	Q96Q42	1657 aa		12.52	□□□□□ -0.4
CKLF-208	ENST00000563092	ATXN8OS	P0DMR3	200 aa		12.52	□□□□□ -0.41
CKLF-208	ENST00000563092	RGPD1	P0DJD0	1748 aa		12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	COL14A1	Q05707	1796 aa	Known RBP	12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	HAP1	P54257	671 aa	Predicted RBP	12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	FAM98C	Q17RN3	349 aa	Known RBP	12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	SPATA31A5	Q5VU36	1347 aa		12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	SPATA31A7	Q8IWB4	1347 aa		12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	TNS1	Q9HBL0	1735 aa	Known RBP	12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	CRYBG1	Q9Y4K1	1723 aa		12.51	□□□□□ -0.41
CKLF-208	ENST00000563092	EN1	Q05925	392 aa	Predicted RBP	12.5	□□□□□ -0.41
CKLF-208	ENST00000563092	BTG4	Q9NY30	223 aa		12.5	□□□□□ -0.41
CKLF-208	ENST00000563092	CCDC9	Q9Y3X0	531 aa	Known RBP	12.5	□□□□□ -0.41
CKLF-208	ENST00000563092	DHX57	Q6P158	1386 aa	Known RBP	12.5	□□□□□ -0.41
CKLF-208	ENST00000563092	PRAM1	Q96QH2	718 aa		12.49	□□□□□ -0.41
CKLF-208	ENST00000563092	MPHOSPH9	Q99550	1183 aa		12.49	□□□□□ -0.41
CKLF-208	ENST00000563092	ADGRB1	O14514	1584 aa		12.48	□□□□□ -0.41
CKLF-208	ENST00000563092	CFAP70	Q5T0N1	1121 aa		12.48	□□□□□ -0.41
CKLF-208	ENST00000563092	CAMKK2	Q96RR4	588 aa		12.48	□□□□□ -0.41
CKLF-208	ENST00000563092	R3HDM1	Q15032	1099 aa	Known RBP	12.47	□□□□□ -0.41
CKLF-208	ENST00000563092	PIP4P2	Q8N4L2	257 aa		12.47	□□□□□ -0.41
CKLF-208	ENST00000563092	PARD3	Q8TEW0	1356 aa		12.46	□□□□□ -0.41
CKLF-208	ENST00000563092	PRR36	Q9H6K5	1346 aa		12.46	□□□□□ -0.41
CKLF-208	ENST00000563092	ACIN1	Q9UKV3	1341 aa	Known RBP	12.46	□□□□□ -0.41
CKLF-208	ENST00000563092	LMOD2	Q6P5Q4	547 aa		12.46	□□□□□ -0.41
CKLF-208	ENST00000563092	PMFBP1	Q8TBY8	1022 aa		12.46	□□□□□ -0.41
CKLF-208	ENST00000563092	FAM182B	Q5T319	152 aa		12.45	□□□□□ -0.42
CKLF-208	ENST00000563092	TULP4	Q9NRJ4	1543 aa		12.45	□□□□□ -0.42
CKLF-208	ENST00000563092	SPATA31A1	Q5TZJ5	1347 aa		12.44	□□□□□ -0.42
CKLF-208	ENST00000563092	PITPNM1	O00562	1244 aa		12.44	□□□□□ -0.42
CKLF-208	ENST00000563092	EZH2	Q15910	746 aa	Known RBP	12.44	□□□□□ -0.42
CKLF-208	ENST00000563092	EIF3A	Q14152	1382 aa	Known RBP	12.43	□□□□□ -0.42
CKLF-208	ENST00000563092	GPRASP1	Q5JY77	1395 aa		12.43	□□□□□ -0.42
CKLF-208	ENST00000563092	RREB1	Q92766	1687 aa		12.43	□□□□□ -0.42
CKLF-208	ENST00000563092		A0A0G2JS52	829 aa		12.43	□□□□□ -0.42
CKLF-208	ENST00000563092	MYT1	Q01538	1121 aa		12.43	□□□□□ -0.42
CKLF-208	ENST00000563092	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
CKLF-208	ENST00000563092	PLEKHG5	O94827	1062 aa		12.42	□□□□□ -0.42
CKLF-208	ENST00000563092	FAM196A	Q6ZSG2	479 aa		12.42	□□□□□ -0.42
CKLF-208	ENST00000563092	SP7	Q8TDD2	431 aa	Predicted RBP	12.42	□□□□□ -0.42
CKLF-208	ENST00000563092	WASL	O00401	505 aa	Predicted RBP	12.41	□□□□□ -0.42
CKLF-208	ENST00000563092	POGK	Q9P215	609 aa		12.41	□□□□□ -0.42
CKLF-208	ENST00000563092	TRIM37	O94972	964 aa		12.4	□□□□□ -0.42
CKLF-208	ENST00000563092	BARGIN	Q6ZT62	677 aa		12.4	□□□□□ -0.42
CKLF-208	ENST00000563092	PRDM11	Q9NQV5	511 aa		12.4	□□□□□ -0.42
CKLF-208	ENST00000563092	KIAA0232	Q92628	1395 aa		12.4	□□□□□ -0.42
CKLF-208	ENST00000563092	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.39	□□□□□ -0.43
CKLF-208	ENST00000563092	NUP188	Q5SRE5	1749 aa		12.39	□□□□□ -0.43
CKLF-208	ENST00000563092	ATP7B	P35670	1465 aa		12.39	□□□□□ -0.43
CKLF-208	ENST00000563092	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.38	□□□□□ -0.43
CKLF-208	ENST00000563092	SSH2	Q76I76	1423 aa		12.37	□□□□□ -0.43
CKLF-208	ENST00000563092	APBA3	O96018	575 aa		12.37	□□□□□ -0.43
CKLF-208	ENST00000563092	TRAK1	Q9UPV9	953 aa		12.37	□□□□□ -0.43
CKLF-208	ENST00000563092	POLR3A	O14802	1390 aa	Predicted RBP	12.37	□□□□□ -0.43
CKLF-208	ENST00000563092	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.37	□□□□□ -0.43
CKLF-208	ENST00000563092	LMO7	Q8WWI1	1683 aa		12.36	□□□□□ -0.43
CKLF-208	ENST00000563092	CPD	O75976	1380 aa		12.36	□□□□□ -0.43
CKLF-208	ENST00000563092	FXR2	P51116	673 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
CKLF-208	ENST00000563092	NGDN	Q8NEJ9	315 aa	Known RBP	12.36	□□□□□ -0.43
CKLF-208	ENST00000563092	CAMTA1	Q9Y6Y1	1673 aa		12.35	□□□□□ -0.43
CKLF-208	ENST00000563092	YY1	P25490	414 aa		12.35	□□□□□ -0.43
CKLF-208	ENST00000563092	CHRNA2	Q15822	529 aa		12.35	□□□□□ -0.43
CKLF-208	ENST00000563092	NRK	Q7Z2Y5	1582 aa		12.35	□□□□□ -0.43
CKLF-208	ENST00000563092	ITSN1	Q15811	1721 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	NINL	Q9Y2I6	1382 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	SPDYE2B	A6NHP3	402 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	SPDYE6	P0CI01	402 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	SPDYE2	Q495Y8	402 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	NUDT16	Q96DE0	195 aa	Known RBP	12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	STAC3	Q96MF2	364 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	USP19	O94966	1318 aa		12.34	□□□□□ -0.43
CKLF-208	ENST00000563092	TOPAZ1	Q8N9V7	1692 aa		12.33	□□□□□ -0.44
CKLF-208	ENST00000563092	PAK3	O75914	559 aa	Predicted RBP	12.33	□□□□□ -0.44
CKLF-208	ENST00000563092	THRAP3	Q9Y2W1	955 aa	Known RBP	12.33	□□□□□ -0.44
CKLF-208	ENST00000563092	PEAK1	Q9H792	1746 aa		12.33	□□□□□ -0.44
CKLF-208	ENST00000563092	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	PARP4	Q9UKK3	1724 aa	Known RBP	12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	PLEKHG3	A1L390	1219 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	KCNQ2	O43526	872 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	ZC3H6	P61129	1189 aa	Known RBP	12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	PDE3B	Q13370	1112 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	NBPF8	Q3BBV2	869 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	NBPF14	Q5TI25	921 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	LARP1	Q6PKG0	1096 aa	Known RBP	12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	TCP11L2	Q8N4U5	519 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	SPON1	Q9HCB6	807 aa		12.32	□□□□□ -0.44
CKLF-208	ENST00000563092	STRN4	Q9NRL3	753 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms