RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 RTN4Q9NQC3 1192 aaKnown RBP18.44■□□□□ 0.54
CNN2-205ENST00000562958 SLC52A1Q9NWF4 448 aa18.44■□□□□ 0.54
CNN2-205ENST00000562958 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
CNN2-205ENST00000562958 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
CNN2-205ENST00000562958 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
CNN2-205ENST00000562958 ZNF428Q96B54 188 aa18.44■□□□□ 0.54
CNN2-205ENST00000562958 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
CNN2-205ENST00000562958 PTPRMP28827 1452 aa18.42■□□□□ 0.54
CNN2-205ENST00000562958 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
CNN2-205ENST00000562958 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
CNN2-205ENST00000562958 TRIM27P14373 513 aa18.41■□□□□ 0.54
CNN2-205ENST00000562958 EXOSC9Q06265 439 aaKnown RBP18.41■□□□□ 0.54
CNN2-205ENST00000562958 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
CNN2-205ENST00000562958 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
CNN2-205ENST00000562958 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
CNN2-205ENST00000562958 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
CNN2-205ENST00000562958 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
CNN2-205ENST00000562958 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
CNN2-205ENST00000562958 TMEM131LA2VDJ0 1609 aa18.4■□□□□ 0.54
CNN2-205ENST00000562958 PPIP5K1Q6PFW1 1433 aa18.39■□□□□ 0.54
CNN2-205ENST00000562958 PREX1Q8TCU6 1659 aa18.39■□□□□ 0.53
CNN2-205ENST00000562958 BRPF1P55201 1214 aaPredicted RBP18.39■□□□□ 0.53
CNN2-205ENST00000562958 SSH1Q8WYL5 1049 aa18.39■□□□□ 0.53
CNN2-205ENST00000562958 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
CNN2-205ENST00000562958 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
CNN2-205ENST00000562958 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
CNN2-205ENST00000562958 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
CNN2-205ENST00000562958 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
CNN2-205ENST00000562958 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
CNN2-205ENST00000562958 POGKQ9P215 609 aa18.38■□□□□ 0.53
CNN2-205ENST00000562958 REREQ9P2R6 1566 aa18.37■□□□□ 0.53
CNN2-205ENST00000562958 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
CNN2-205ENST00000562958 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
CNN2-205ENST00000562958 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
CNN2-205ENST00000562958 MYO5BQ9ULV0 1848 aa18.36■□□□□ 0.53
CNN2-205ENST00000562958 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
CNN2-205ENST00000562958 YTHDC2Q9H6S0 1430 aaKnown RBP18.36■□□□□ 0.53
CNN2-205ENST00000562958 FYB1O15117 783 aa18.35■□□□□ 0.53
CNN2-205ENST00000562958 FCHSD2O94868 740 aa18.35■□□□□ 0.53
CNN2-205ENST00000562958 NOB1Q9ULX3 412 aaKnown RBP18.35■□□□□ 0.53
CNN2-205ENST00000562958 RIPK4P57078 832 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
CNN2-205ENST00000562958 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 MCM4P33991 863 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 IDI1Q13907 227 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
CNN2-205ENST00000562958 DLC1Q96QB1 1528 aa18.33■□□□□ 0.53
CNN2-205ENST00000562958 ATP7BP35670 1465 aa18.33■□□□□ 0.53
CNN2-205ENST00000562958 NCOA3Q9Y6Q9 1424 aa18.33■□□□□ 0.53
CNN2-205ENST00000562958 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.52
CNN2-205ENST00000562958 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
CNN2-205ENST00000562958 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.52
CNN2-205ENST00000562958 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
CNN2-205ENST00000562958 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
CNN2-205ENST00000562958 NUCB1Q02818 461 aa18.32■□□□□ 0.52
CNN2-205ENST00000562958 SNX21Q969T3 373 aa18.32■□□□□ 0.52
CNN2-205ENST00000562958 ARHGEF40Q8TER5 1519 aa18.32■□□□□ 0.52
CNN2-205ENST00000562958 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
CNN2-205ENST00000562958 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
CNN2-205ENST00000562958 ISY1Q9ULR0 285 aaKnown RBP18.32■□□□□ 0.52
CNN2-205ENST00000562958 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
CNN2-205ENST00000562958 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
CNN2-205ENST00000562958 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
CNN2-205ENST00000562958 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
CNN2-205ENST00000562958 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
CNN2-205ENST00000562958 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
CNN2-205ENST00000562958 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
CNN2-205ENST00000562958 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
CNN2-205ENST00000562958 GOLGA6L3A6NEY3 463 aa18.29■□□□□ 0.52
CNN2-205ENST00000562958 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
CNN2-205ENST00000562958 PTMSP20962 102 aa18.28■□□□□ 0.52
CNN2-205ENST00000562958 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
CNN2-205ENST00000562958 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
CNN2-205ENST00000562958 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
CNN2-205ENST00000562958 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
CNN2-205ENST00000562958 CHD1LQ86WJ1 897 aa18.27■□□□□ 0.52
CNN2-205ENST00000562958 STK26Q9P289 416 aa18.27■□□□□ 0.52
CNN2-205ENST00000562958 CFAP44Q96MT7 982 aa18.27■□□□□ 0.51
CNN2-205ENST00000562958 MINK1Q8N4C8 1332 aaPredicted RBP18.26■□□□□ 0.51
CNN2-205ENST00000562958 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 DDIT3P35638 169 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 GNAI1P63096 354 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
CNN2-205ENST00000562958 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
CNN2-205ENST00000562958 TRAK2O60296 914 aa18.23■□□□□ 0.51
CNN2-205ENST00000562958 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
CNN2-205ENST00000562958 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
CNN2-205ENST00000562958 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
CNN2-205ENST00000562958 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
CNN2-205ENST00000562958 MRE11P49959 708 aa18.22■□□□□ 0.51
CNN2-205ENST00000562958 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
CNN2-205ENST00000562958 AATKQ6ZMQ8 1374 aa18.21■□□□□ 0.51
CNN2-205ENST00000562958 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
CNN2-205ENST00000562958 MRPL50Q8N5N7 158 aaKnown RBP18.21■□□□□ 0.51
CNN2-205ENST00000562958 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.5
CNN2-205ENST00000562958 ABCC4O15439 1325 aa18.2■□□□□ 0.5
CNN2-205ENST00000562958 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms