RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
CHD9-205ENST00000562785 EVA1BQ9NVM1 165 aa10.61□□□□□ -0.71
CHD9-205ENST00000562785 KCNH2Q12809 1159 aa10.6□□□□□ -0.71
CHD9-205ENST00000562785 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
CHD9-205ENST00000562785 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
CHD9-205ENST00000562785 CTHP32929 405 aa10.59□□□□□ -0.71
CHD9-205ENST00000562785 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
CHD9-205ENST00000562785 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
CHD9-205ENST00000562785 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
CHD9-205ENST00000562785 SOX11P35716 441 aa10.57□□□□□ -0.72
CHD9-205ENST00000562785 NR1H3Q13133 447 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 GPKOWQ92917 476 aaPredicted RBP eCLIP10.56□□□□□ -0.72
CHD9-205ENST00000562785 ALG2Q9H553 416 aa10.56□□□□□ -0.72
CHD9-205ENST00000562785 ZBBXA8MT70 800 aa10.55□□□□□ -0.72
CHD9-205ENST00000562785 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
CHD9-205ENST00000562785 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
CHD9-205ENST00000562785 S1PR4O95977 384 aa10.54□□□□□ -0.72
CHD9-205ENST00000562785 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
CHD9-205ENST00000562785 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
CHD9-205ENST00000562785 GPSM3Q9Y4H4 160 aa10.53□□□□□ -0.72
CHD9-205ENST00000562785 EIF4G2P78344 907 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD9-205ENST00000562785 PDXDC2PQ6P474 469 aa10.52□□□□□ -0.73
CHD9-205ENST00000562785 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
CHD9-205ENST00000562785 KCNC4Q03721 635 aa10.51□□□□□ -0.73
CHD9-205ENST00000562785 PTCRAQ6ISU1 281 aaPredicted RBP10.51□□□□□ -0.73
CHD9-205ENST00000562785 FCF1Q9Y324 198 aaKnown RBP10.5□□□□□ -0.73
CHD9-205ENST00000562785 PTK2Q05397 1052 aa10.49□□□□□ -0.73
CHD9-205ENST00000562785 SEMA3FQ13275 785 aa10.49□□□□□ -0.73
CHD9-205ENST00000562785 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
CHD9-205ENST00000562785 UCN2Q96RP3 112 aa10.48□□□□□ -0.73
CHD9-205ENST00000562785 SH3BP5LQ7L8J4 393 aa10.47□□□□□ -0.73
CHD9-205ENST00000562785 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.73
CHD9-205ENST00000562785 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
CHD9-205ENST00000562785 ZNF592Q92610 1267 aa10.45□□□□□ -0.74
CHD9-205ENST00000562785 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
CHD9-205ENST00000562785 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
CHD9-205ENST00000562785 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
CHD9-205ENST00000562785 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
CHD9-205ENST00000562785 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
CHD9-205ENST00000562785 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
CHD9-205ENST00000562785 BAP1Q92560 729 aa10.43□□□□□ -0.74
CHD9-205ENST00000562785 PPEF1O14829 653 aaPredicted RBP10.42□□□□□ -0.74
CHD9-205ENST00000562785 GGCXP38435 758 aa10.42□□□□□ -0.74
CHD9-205ENST00000562785 MCCD1P59942 119 aaPredicted RBP10.42□□□□□ -0.74
CHD9-205ENST00000562785 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
CHD9-205ENST00000562785 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
CHD9-205ENST00000562785 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
CHD9-205ENST00000562785 NFATC2IPQ8NCF5 419 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 TFIP11Q9UBB9 837 aaKnown RBP10.4□□□□□ -0.74
CHD9-205ENST00000562785 PCDHB9Q9Y5E1 797 aa10.4□□□□□ -0.74
CHD9-205ENST00000562785 ATP9BO43861 1147 aa10.39□□□□□ -0.75
CHD9-205ENST00000562785 PLA2G2CQ5R387 149 aa10.39□□□□□ -0.75
CHD9-205ENST00000562785 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
CHD9-205ENST00000562785 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
CHD9-205ENST00000562785 SRPK2P78362 688 aaKnown RBP10.38□□□□□ -0.75
CHD9-205ENST00000562785 FOXJ1Q92949 421 aa10.38□□□□□ -0.75
CHD9-205ENST00000562785 CARD14Q9BXL6 1004 aa10.38□□□□□ -0.75
CHD9-205ENST00000562785 CEP126Q9P2H0 1117 aa10.38□□□□□ -0.75
CHD9-205ENST00000562785 MAGEB6P1A0A0J9YX57 407 aa10.37□□□□□ -0.75
CHD9-205ENST00000562785 PIK3CDO00329 1044 aa10.37□□□□□ -0.75
CHD9-205ENST00000562785 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
CHD9-205ENST00000562785 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
CHD9-205ENST00000562785 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
CHD9-205ENST00000562785 C1QTNF2Q9BXJ5 285 aa10.37□□□□□ -0.75
CHD9-205ENST00000562785 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
CHD9-205ENST00000562785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.36□□□□□ -0.75
CHD9-205ENST00000562785 ZBTB24O43167 697 aaPredicted RBP10.36□□□□□ -0.75
CHD9-205ENST00000562785 RFX1P22670 979 aa10.36□□□□□ -0.75
CHD9-205ENST00000562785 SH3BP2P78314 561 aa10.36□□□□□ -0.75
CHD9-205ENST00000562785 TRIM32Q13049 653 aa10.36□□□□□ -0.75
CHD9-205ENST00000562785 ERFEQ4G0M1 354 aa10.36□□□□□ -0.75
CHD9-205ENST00000562785 AGERQ15109 404 aa10.35□□□□□ -0.75
CHD9-205ENST00000562785 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
CHD9-205ENST00000562785 DZIP3Q86Y13 1208 aaKnown RBP10.35□□□□□ -0.75
CHD9-205ENST00000562785 FAM174AQ8TBP5 190 aa10.35□□□□□ -0.75
CHD9-205ENST00000562785 RPIAP49247 311 aa10.34□□□□□ -0.75
CHD9-205ENST00000562785 WNT7BP56706 349 aa10.34□□□□□ -0.75
CHD9-205ENST00000562785 SLFNL1Q499Z3 407 aa10.34□□□□□ -0.75
CHD9-205ENST00000562785 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
CHD9-205ENST00000562785 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
CHD9-205ENST00000562785 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
CHD9-205ENST00000562785 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
CHD9-205ENST00000562785 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
CHD9-205ENST00000562785 USP17L5A8MUK1 530 aa10.32□□□□□ -0.76
CHD9-205ENST00000562785 SKIP12755 728 aa10.32□□□□□ -0.76
CHD9-205ENST00000562785 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
CHD9-205ENST00000562785 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
CHD9-205ENST00000562785 USP17L3A6NCW0 530 aa10.31□□□□□ -0.76
CHD9-205ENST00000562785 USP17L4A6NCW7 530 aa10.31□□□□□ -0.76
CHD9-205ENST00000562785 SKOR1P84550 965 aa10.31□□□□□ -0.76
CHD9-205ENST00000562785 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
CHD9-205ENST00000562785 USP17L1Q7RTZ2 530 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms