RNA–Protein interactions for RNA: ENST00000562336.5

COX4I1-203, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COX4I1, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-203ENST00000562336 CCDC9Q9Y3X0 531 aaKnown RBP38.36■■■■□ 3.73
COX4I1-203ENST00000562336 TOPAZ1Q8N9V7 1692 aa38.36■■■■□ 3.73
COX4I1-203ENST00000562336 ACEP12821 1306 aa38.36■■■■□ 3.73
COX4I1-203ENST00000562336 POLR3AO14802 1390 aaPredicted RBP38.33■■■■□ 3.73
COX4I1-203ENST00000562336 PLEKHG3A1L390 1219 aa38.33■■■■□ 3.73
COX4I1-203ENST00000562336 NBPF8Q3BBV2 869 aa38.33■■■■□ 3.73
COX4I1-203ENST00000562336 CRYBG1Q9Y4K1 1723 aa38.32■■■■□ 3.73
COX4I1-203ENST00000562336 BTG4Q9NY30 223 aa38.32■■■■□ 3.72
COX4I1-203ENST00000562336 SRPK2P78362 688 aaKnown RBP38.31■■■■□ 3.72
COX4I1-203ENST00000562336 SEPT12Q8IYM1 358 aa38.3■■■■□ 3.72
COX4I1-203ENST00000562336 CABP2Q9NPB3 220 aa38.3■■■■□ 3.72
COX4I1-203ENST00000562336 NUTM2GQ5VZR2 741 aa38.29■■■■□ 3.72
COX4I1-203ENST00000562336 NRAPQ86VF7 1730 aa38.27■■■■□ 3.72
COX4I1-203ENST00000562336 COL14A1Q05707 1796 aaKnown RBP38.27■■■■□ 3.72
COX4I1-203ENST00000562336 TRPM1Q7Z4N2 1603 aa38.27■■■■□ 3.72
COX4I1-203ENST00000562336 QRICH2Q9H0J4 1663 aa38.27■■■■□ 3.72
COX4I1-203ENST00000562336 EP400Q96L91 3159 aa38.26■■■■□ 3.72
COX4I1-203ENST00000562336 BRWD3Q6RI45 1802 aa38.26■■■■□ 3.71
COX4I1-203ENST00000562336 ONECUT3O60422 494 aaPredicted RBP38.25■■■■□ 3.71
COX4I1-203ENST00000562336 PPIP5K1Q6PFW1 1433 aa38.23■■■■□ 3.71
COX4I1-203ENST00000562336 PRDM11Q9NQV5 511 aa38.23■■■■□ 3.71
COX4I1-203ENST00000562336 ROCK2O75116 1388 aaKnown RBP38.19■■■■□ 3.7
COX4I1-203ENST00000562336 KIAA0232Q92628 1395 aa38.19■■■■□ 3.7
COX4I1-203ENST00000562336 CHRNA2Q15822 529 aa38.19■■■■□ 3.7
COX4I1-203ENST00000562336 PHRF1Q9P1Y6 1649 aaKnown RBP38.19■■■■□ 3.7
COX4I1-203ENST00000562336 ZC3H6P61129 1189 aaKnown RBP38.18■■■■□ 3.7
COX4I1-203ENST00000562336 FAM98CQ17RN3 349 aaKnown RBP38.18■■■■□ 3.7
COX4I1-203ENST00000562336 CCDC125Q86Z20 511 aa38.18■■■■□ 3.7
COX4I1-203ENST00000562336 ABTB2Q8N961 1025 aa38.16■■■■□ 3.7
COX4I1-203ENST00000562336 CABP1Q9NZU7 370 aa38.15■■■■□ 3.7
COX4I1-203ENST00000562336 A0A0G2JS52 829 aa38.14■■■■□ 3.7
COX4I1-203ENST00000562336 MYT1Q01538 1121 aa38.14■■■■□ 3.7
COX4I1-203ENST00000562336 KRT27Q7Z3Y8 459 aa38.14■■■■□ 3.7
COX4I1-203ENST00000562336 SPATA31A5Q5VU36 1347 aa38.13■■■■□ 3.7
COX4I1-203ENST00000562336 SPATA31A7Q8IWB4 1347 aa38.13■■■■□ 3.7
COX4I1-203ENST00000562336 EVC2Q86UK5 1308 aa38.11■■■■□ 3.69
COX4I1-203ENST00000562336 BLMP54132 1417 aaPredicted RBP38.09■■■■□ 3.69
COX4I1-203ENST00000562336 USP19O94966 1318 aa38.08■■■■□ 3.69
COX4I1-203ENST00000562336 STRN4Q9NRL3 753 aa38.07■■■■□ 3.68
COX4I1-203ENST00000562336 NRKQ7Z2Y5 1582 aa38.06■■■■□ 3.68
COX4I1-203ENST00000562336 NLRP13Q86W25 1043 aa38.05■■■■□ 3.68
COX4I1-203ENST00000562336 USP6P35125 1406 aa38.04■■■■□ 3.68
COX4I1-203ENST00000562336 DEFB132Q7Z7B7 95 aa38.02■■■■□ 3.68
COX4I1-203ENST00000562336 BRD4O60885 1362 aaPredicted RBP38.02■■■■□ 3.68
COX4I1-203ENST00000562336 GCP02774 474 aa38.01■■■■□ 3.68
COX4I1-203ENST00000562336 SPATA31A1Q5TZJ5 1347 aa38.01■■■■□ 3.68
COX4I1-203ENST00000562336 CPDO75976 1380 aa37.98■■■■□ 3.67
COX4I1-203ENST00000562336 FAM182BQ5T319 152 aa37.98■■■■□ 3.67
COX4I1-203ENST00000562336 CAMTA1Q9Y6Y1 1673 aa37.98■■■■□ 3.67
COX4I1-203ENST00000562336 NLRP6P59044 892 aa37.97■■■■□ 3.67
COX4I1-203ENST00000562336 TRIM26Q12899 539 aaPredicted RBP37.97■■■■□ 3.67
COX4I1-203ENST00000562336 ZRANB1Q9UGI0 708 aa37.97■■■■□ 3.67
COX4I1-203ENST00000562336 THSD7AQ9UPZ6 1657 aa37.97■■■■□ 3.67
COX4I1-203ENST00000562336 SSH2Q76I76 1423 aa37.96■■■■□ 3.67
COX4I1-203ENST00000562336 TONSLQ96HA7 1378 aa37.96■■■■□ 3.67
COX4I1-203ENST00000562336 EVA1CP58658 441 aa37.96■■■■□ 3.67
COX4I1-203ENST00000562336 SF3B2Q13435 895 aaKnown RBP37.96■■■■□ 3.67
COX4I1-203ENST00000562336 CARD11Q9BXL7 1154 aa37.96■■■■□ 3.67
COX4I1-203ENST00000562336 LMO7Q8WWI1 1683 aa37.93■■■■□ 3.66
COX4I1-203ENST00000562336 USP35Q9P2H5 1018 aa37.93■■■■□ 3.66
COX4I1-203ENST00000562336 LARP1Q6PKG0 1096 aaKnown RBP37.92■■■■□ 3.66
COX4I1-203ENST00000562336 ZBTB7CA1YPR0 619 aa37.89■■■■□ 3.66
COX4I1-203ENST00000562336 PIK3C2AO00443 1686 aa37.88■■■■□ 3.66
COX4I1-203ENST00000562336 ZNF692Q9BU19 519 aaPredicted RBP37.88■■■■□ 3.65
COX4I1-203ENST00000562336 TTC21BQ7Z4L5 1316 aa37.87■■■■□ 3.65
COX4I1-203ENST00000562336 SLIT3O75094 1523 aa37.87■■■■□ 3.65
COX4I1-203ENST00000562336 SBNO2Q9Y2G9 1366 aa37.85■■■■□ 3.65
COX4I1-203ENST00000562336 AKAP12Q02952 1782 aa37.84■■■■□ 3.65
COX4I1-203ENST00000562336 BARGINQ6ZT62 677 aa37.83■■■■□ 3.65
COX4I1-203ENST00000562336 CPSF1Q10570 1443 aaKnown RBP37.83■■■■□ 3.65
COX4I1-203ENST00000562336 COL5A2P05997 1499 aaPredicted RBP37.81■■■■□ 3.64
COX4I1-203ENST00000562336 BAG6P46379 1132 aa37.8■■■■□ 3.64
COX4I1-203ENST00000562336 TCP11L2Q8N4U5 519 aa37.8■■■■□ 3.64
COX4I1-203ENST00000562336 KTN1Q86UP2 1357 aaKnown RBP37.8■■■■□ 3.64
COX4I1-203ENST00000562336 AATKQ6ZMQ8 1374 aa37.79■■■■□ 3.64
COX4I1-203ENST00000562336 TTC21AQ8NDW8 1320 aa37.77■■■■□ 3.64
COX4I1-203ENST00000562336 SOX12O15370 315 aa37.75■■■■□ 3.63
COX4I1-203ENST00000562336 EN1Q05925 392 aaPredicted RBP37.74■■■■□ 3.63
COX4I1-203ENST00000562336 SRCAPQ6ZRS2 3230 aa37.74■■■■□ 3.63
COX4I1-203ENST00000562336 RGPD1P0DJD0 1748 aa37.73■■■■□ 3.63
COX4I1-203ENST00000562336 AXIN2Q9Y2T1 843 aa37.73■■■■□ 3.63
COX4I1-203ENST00000562336 COL18A1P39060 1754 aa37.73■■■■□ 3.63
COX4I1-203ENST00000562336 FAM196AQ6ZSG2 479 aa37.72■■■■□ 3.63
COX4I1-203ENST00000562336 TMC1Q8TDI8 760 aa37.72■■■■□ 3.63
COX4I1-203ENST00000562336 THRAP3Q9Y2W1 955 aaKnown RBP37.72■■■■□ 3.63
COX4I1-203ENST00000562336 CD163L1Q9NR16 1453 aa37.71■■■■□ 3.63
COX4I1-203ENST00000562336 CRB1P82279 1406 aa37.71■■■■□ 3.63
COX4I1-203ENST00000562336 PDE3BQ13370 1112 aa37.71■■■■□ 3.63
COX4I1-203ENST00000562336 ARHGEF25Q86VW2 580 aa37.71■■■■□ 3.63
COX4I1-203ENST00000562336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.7■■■■□ 3.63
COX4I1-203ENST00000562336 KCNH5Q8NCM2 988 aa37.7■■■■□ 3.63
COX4I1-203ENST00000562336 SLC12A5Q9H2X9 1139 aa37.7■■■■□ 3.63
COX4I1-203ENST00000562336 MON2Q7Z3U7 1717 aa37.7■■■■□ 3.63
COX4I1-203ENST00000562336 TRIM37O94972 964 aa37.69■■■■□ 3.62
COX4I1-203ENST00000562336 TNS1Q9HBL0 1735 aaKnown RBP37.67■■■■□ 3.62
COX4I1-203ENST00000562336 TOM1L2Q6ZVM7 507 aa37.65■■■■□ 3.62
COX4I1-203ENST00000562336 ST20-MTHFSA0A0A6YYL1 179 aa37.64■■■■□ 3.62
COX4I1-203ENST00000562336 NME9Q86XW9 330 aa37.64■■■■□ 3.62
COX4I1-203ENST00000562336 NFAT5O94916 1531 aa37.63■■■■□ 3.61
COX4I1-203ENST00000562336 TESK2Q96S53 571 aa37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms