RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 MVPQ14764 893 aaKnown RBP23.53■■□□□ 1.36
BBS4-204ENST00000562084 NAP1L5Q96NT1 182 aaPredicted RBP23.53■■□□□ 1.36
BBS4-204ENST00000562084 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
BBS4-204ENST00000562084 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
BBS4-204ENST00000562084 HSCBQ8IWL3 235 aa23.51■■□□□ 1.35
BBS4-204ENST00000562084 HSP90AA1P07900 732 aaKnown RBP23.51■■□□□ 1.35
BBS4-204ENST00000562084 RLBP1P12271 317 aa23.5■■□□□ 1.35
BBS4-204ENST00000562084 HDAC1Q13547 482 aaPredicted RBP23.5■■□□□ 1.35
BBS4-204ENST00000562084 CIZ1Q9ULV3 898 aaPredicted RBP23.5■■□□□ 1.35
BBS4-204ENST00000562084 TCP11L2Q8N4U5 519 aa23.49■■□□□ 1.35
BBS4-204ENST00000562084 GRPEL1Q9HAV7 217 aa23.49■■□□□ 1.35
BBS4-204ENST00000562084 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
BBS4-204ENST00000562084 SNX21Q969T3 373 aa23.48■■□□□ 1.35
BBS4-204ENST00000562084 KIF1BO60333 1816 aa23.47■■□□□ 1.35
BBS4-204ENST00000562084 SETBP1Q9Y6X0 1596 aa23.47■■□□□ 1.35
BBS4-204ENST00000562084 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
BBS4-204ENST00000562084 SKOR2Q2VWA4 1001 aaPredicted RBP23.47■■□□□ 1.35
BBS4-204ENST00000562084 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
BBS4-204ENST00000562084 CEP170BQ9Y4F5 1589 aaPredicted RBP23.46■■□□□ 1.35
BBS4-204ENST00000562084 MORC1Q86VD1 984 aa23.46■■□□□ 1.35
BBS4-204ENST00000562084 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
BBS4-204ENST00000562084 A2ML1A8K2U0 1454 aa23.46■■□□□ 1.35
BBS4-204ENST00000562084 NRXN1Q9ULB1 1477 aa23.46■■□□□ 1.35
BBS4-204ENST00000562084 ZNF142P52746 1687 aaPredicted RBP23.46■■□□□ 1.35
BBS4-204ENST00000562084 PANK2Q9BZ23 570 aa23.45■■□□□ 1.35
BBS4-204ENST00000562084 UBR1Q8IWV7 1749 aa23.45■■□□□ 1.34
BBS4-204ENST00000562084 DDIT3P35638 169 aa23.45■■□□□ 1.34
BBS4-204ENST00000562084 HSP90AA2PQ14568 343 aaPredicted RBP23.45■■□□□ 1.34
BBS4-204ENST00000562084 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
BBS4-204ENST00000562084 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
BBS4-204ENST00000562084 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
BBS4-204ENST00000562084 CHGAP10645 457 aaKnown RBP23.44■■□□□ 1.34
BBS4-204ENST00000562084 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
BBS4-204ENST00000562084 NSD3Q9BZ95 1437 aa23.44■■□□□ 1.34
BBS4-204ENST00000562084 ESPNB1AK53 854 aa23.43■■□□□ 1.34
BBS4-204ENST00000562084 RBM25P49756 843 aaKnown RBP23.43■■□□□ 1.34
BBS4-204ENST00000562084 FTSJ3Q8IY81 847 aaKnown RBP23.43■■□□□ 1.34
BBS4-204ENST00000562084 GZF1Q9H116 711 aaPredicted RBP23.43■■□□□ 1.34
BBS4-204ENST00000562084 GBP4Q96PP9 640 aa23.43■■□□□ 1.34
BBS4-204ENST00000562084 DDX19BQ9UMR2 479 aa23.43■■□□□ 1.34
BBS4-204ENST00000562084 ADGRB3O60242 1522 aa23.42■■□□□ 1.34
BBS4-204ENST00000562084 STAG3Q9UJ98 1225 aa23.42■■□□□ 1.34
BBS4-204ENST00000562084 MFAP1P55081 439 aaKnown RBP23.41■■□□□ 1.34
BBS4-204ENST00000562084 SMC5Q8IY18 1101 aa23.41■■□□□ 1.34
BBS4-204ENST00000562084 NSD2O96028 1365 aa23.41■■□□□ 1.34
BBS4-204ENST00000562084 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
BBS4-204ENST00000562084 LMTK3Q96Q04 1460 aa23.39■■□□□ 1.34
BBS4-204ENST00000562084 TPM2P07951 284 aa23.39■■□□□ 1.34
BBS4-204ENST00000562084 TRIM44Q96DX7 344 aaPredicted RBP23.39■■□□□ 1.33
BBS4-204ENST00000562084 CFAP70Q5T0N1 1121 aa23.38■■□□□ 1.33
BBS4-204ENST00000562084 TNNQ9UQP3 1299 aa23.38■■□□□ 1.33
BBS4-204ENST00000562084 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
BBS4-204ENST00000562084 SPRYD3Q8NCJ5 442 aa23.37■■□□□ 1.33
BBS4-204ENST00000562084 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
BBS4-204ENST00000562084 THEMISQ8N1K5 641 aaPredicted RBP23.36■■□□□ 1.33
BBS4-204ENST00000562084 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
BBS4-204ENST00000562084 ARXQ96QS3 562 aa23.35■■□□□ 1.33
BBS4-204ENST00000562084 KIF16BQ96L93 1317 aa23.35■■□□□ 1.33
BBS4-204ENST00000562084 PKNOX2Q96KN3 472 aa23.34■■□□□ 1.33
BBS4-204ENST00000562084 RAB3GAP1Q15042 981 aa23.34■■□□□ 1.33
BBS4-204ENST00000562084 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
BBS4-204ENST00000562084 HSPA2P54652 639 aa23.33■■□□□ 1.33
BBS4-204ENST00000562084 IL16Q14005 1332 aa23.33■■□□□ 1.32
BBS4-204ENST00000562084 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
BBS4-204ENST00000562084 IBTKQ9P2D0 1353 aaPredicted RBP23.32■■□□□ 1.32
BBS4-204ENST00000562084 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
BBS4-204ENST00000562084 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
BBS4-204ENST00000562084 TNPO1Q92973 898 aaKnown RBP23.31■■□□□ 1.32
BBS4-204ENST00000562084 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
BBS4-204ENST00000562084 MTHFSP49914 203 aa23.3■■□□□ 1.32
BBS4-204ENST00000562084 CCDC173Q0VFZ6 552 aa23.3■■□□□ 1.32
BBS4-204ENST00000562084 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
BBS4-204ENST00000562084 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
BBS4-204ENST00000562084 SLIT1O75093 1534 aa23.29■■□□□ 1.32
BBS4-204ENST00000562084 HSP90AB1P08238 724 aaKnown RBP23.29■■□□□ 1.32
BBS4-204ENST00000562084 NUCB1Q02818 461 aa23.29■■□□□ 1.32
BBS4-204ENST00000562084 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
BBS4-204ENST00000562084 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 TRIM27P14373 513 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 CLEC17AQ6ZS10 378 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 PPLO60437 1756 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 ZFYVE9O95405 1425 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 IPO8O15397 1037 aaKnown RBP23.28■■□□□ 1.32
BBS4-204ENST00000562084 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
BBS4-204ENST00000562084 NUTM2DQ5VT03 806 aaPredicted RBP23.27■■□□□ 1.32
BBS4-204ENST00000562084 PPP1R9BQ96SB3 815 aa23.27■■□□□ 1.32
BBS4-204ENST00000562084 GOLGA6L22H0YM25 854 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 BMP2KLQ5H9B9 411 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 ITPRIPQ8IWB1 547 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 CHMP4BQ9H444 224 aaKnown RBP23.26■■□□□ 1.31
BBS4-204ENST00000562084 ZBTB40Q9NUA8 1239 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 RPGRIP1LQ68CZ1 1315 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 LTKP29376 864 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 TERF1P54274 439 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
BBS4-204ENST00000562084 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
BBS4-204ENST00000562084 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
BBS4-204ENST00000562084 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
BBS4-204ENST00000562084 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
BBS4-204ENST00000562084 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms