RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 HSPA2P54652 639 aa14.4□□□□□ -0.1
VAC14-203ENST00000561879 SRPK2P78362 688 aaKnown RBP14.4□□□□□ -0.1
VAC14-203ENST00000561879 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
VAC14-203ENST00000561879 XRN1Q8IZH2 1706 aaKnown RBP14.39□□□□□ -0.11
VAC14-203ENST00000561879 CABP2Q9NPB3 220 aa14.39□□□□□ -0.11
VAC14-203ENST00000561879 KTN1Q86UP2 1357 aaKnown RBP14.38□□□□□ -0.11
VAC14-203ENST00000561879 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
VAC14-203ENST00000561879 CHD2O14647 1828 aaKnown RBP14.37□□□□□ -0.11
VAC14-203ENST00000561879 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
VAC14-203ENST00000561879 PRKRIP1Q9H875 184 aaPredicted RBP14.37□□□□□ -0.11
VAC14-203ENST00000561879 NPC1L1Q9UHC9 1359 aa14.36□□□□□ -0.11
VAC14-203ENST00000561879 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
VAC14-203ENST00000561879 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
VAC14-203ENST00000561879 ADGRB2O60241 1585 aa14.35□□□□□ -0.11
VAC14-203ENST00000561879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
VAC14-203ENST00000561879 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
VAC14-203ENST00000561879 RALBP1Q15311 655 aa14.35□□□□□ -0.11
VAC14-203ENST00000561879 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
VAC14-203ENST00000561879 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
VAC14-203ENST00000561879 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
VAC14-203ENST00000561879 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
VAC14-203ENST00000561879 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
VAC14-203ENST00000561879 NCOA3Q9Y6Q9 1424 aa14.33□□□□□ -0.11
VAC14-203ENST00000561879 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
VAC14-203ENST00000561879 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
VAC14-203ENST00000561879 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
VAC14-203ENST00000561879 NWD1Q149M9 1564 aa14.33□□□□□ -0.12
VAC14-203ENST00000561879 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
VAC14-203ENST00000561879 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
VAC14-203ENST00000561879 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
VAC14-203ENST00000561879 MYOM1P52179 1685 aa14.32□□□□□ -0.12
VAC14-203ENST00000561879 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
VAC14-203ENST00000561879 CABP1Q9NZU7 370 aa14.31□□□□□ -0.12
VAC14-203ENST00000561879 STK24Q9Y6E0 443 aa14.31□□□□□ -0.12
VAC14-203ENST00000561879 STRCQ7RTU9 1775 aa14.3□□□□□ -0.12
VAC14-203ENST00000561879 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
VAC14-203ENST00000561879 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
VAC14-203ENST00000561879 PARD3Q8TEW0 1356 aa14.29□□□□□ -0.12
VAC14-203ENST00000561879 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
VAC14-203ENST00000561879 ATP7BP35670 1465 aa14.29□□□□□ -0.12
VAC14-203ENST00000561879 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
VAC14-203ENST00000561879 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
VAC14-203ENST00000561879 C19orf44Q9H6X5 657 aa14.28□□□□□ -0.12
VAC14-203ENST00000561879 ADGRL3Q9HAR2 1447 aa14.28□□□□□ -0.12
VAC14-203ENST00000561879 CD163L1Q9NR16 1453 aa14.27□□□□□ -0.12
VAC14-203ENST00000561879 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.12
VAC14-203ENST00000561879 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
VAC14-203ENST00000561879 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.13
VAC14-203ENST00000561879 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
VAC14-203ENST00000561879 A0A1W2PP64 1363 aa14.26□□□□□ -0.13
VAC14-203ENST00000561879 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
VAC14-203ENST00000561879 NSD2O96028 1365 aa14.25□□□□□ -0.13
VAC14-203ENST00000561879 MYBBP1AQ9BQG0 1328 aaKnown RBP14.25□□□□□ -0.13
VAC14-203ENST00000561879 CDC42BPGQ6DT37 1551 aa14.25□□□□□ -0.13
VAC14-203ENST00000561879 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
VAC14-203ENST00000561879 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
VAC14-203ENST00000561879 C14orf37Q86TY3 774 aa14.23□□□□□ -0.13
VAC14-203ENST00000561879 NLRP13Q86W25 1043 aa14.23□□□□□ -0.13
VAC14-203ENST00000561879 DCCP43146 1447 aa14.23□□□□□ -0.13
VAC14-203ENST00000561879 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
VAC14-203ENST00000561879 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
VAC14-203ENST00000561879 EDC4Q6P2E9 1401 aaKnown RBP14.22□□□□□ -0.13
VAC14-203ENST00000561879 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
VAC14-203ENST00000561879 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
VAC14-203ENST00000561879 FYB1O15117 783 aa14.21□□□□□ -0.13
VAC14-203ENST00000561879 RBM33Q96EV2 1170 aaKnown RBP14.21□□□□□ -0.13
VAC14-203ENST00000561879 ACEP12821 1306 aa14.2□□□□□ -0.14
VAC14-203ENST00000561879 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
VAC14-203ENST00000561879 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
VAC14-203ENST00000561879 NALCNQ8IZF0 1738 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 FMN2Q9NZ56 1722 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 NUTM2FA1L443 756 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 ATF3P18847 181 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 MORC1Q86VD1 984 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
VAC14-203ENST00000561879 PPP2R1AP30153 589 aa14.18□□□□□ -0.14
VAC14-203ENST00000561879 CNGB1Q14028 1251 aaPredicted RBP14.18□□□□□ -0.14
VAC14-203ENST00000561879 NGDNQ8NEJ9 315 aaKnown RBP14.18□□□□□ -0.14
VAC14-203ENST00000561879 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
VAC14-203ENST00000561879 STRCP1A6NGW2 1772 aa14.18□□□□□ -0.14
VAC14-203ENST00000561879 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
VAC14-203ENST00000561879 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
VAC14-203ENST00000561879 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
VAC14-203ENST00000561879 CCDC184Q52MB2 194 aa14.17□□□□□ -0.14
VAC14-203ENST00000561879 RYDENQ9NUL5 291 aaKnown RBP14.17□□□□□ -0.14
VAC14-203ENST00000561879 MSH6P52701 1360 aa14.17□□□□□ -0.14
VAC14-203ENST00000561879 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 USP6P35125 1406 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 ITSN1Q15811 1721 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 PDAP1Q13442 181 aaKnown RBP14.16□□□□□ -0.14
VAC14-203ENST00000561879 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
VAC14-203ENST00000561879 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.14
VAC14-203ENST00000561879 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
VAC14-203ENST00000561879 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
VAC14-203ENST00000561879 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
VAC14-203ENST00000561879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.14□□□□□ -0.15
VAC14-203ENST00000561879 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms