RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ANKARQ7Z5J8 1434 aa27.13■■□□□ 1.93
COMMD4-204ENST00000561662 GPRASP1Q5JY77 1395 aa27.12■■□□□ 1.93
COMMD4-204ENST00000561662 PRDM11Q9NQV5 511 aa27.12■■□□□ 1.93
COMMD4-204ENST00000561662 MINK1Q8N4C8 1332 aaPredicted RBP27.12■■□□□ 1.93
COMMD4-204ENST00000561662 PRR36Q9H6K5 1346 aa27.12■■□□□ 1.93
COMMD4-204ENST00000561662 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
COMMD4-204ENST00000561662 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
COMMD4-204ENST00000561662 THSD7AQ9UPZ6 1657 aa27.11■■□□□ 1.93
COMMD4-204ENST00000561662 CAMKK2Q96RR4 588 aa27.11■■□□□ 1.93
COMMD4-204ENST00000561662 DISP2A7MBM2 1401 aa27.1■■□□□ 1.93
COMMD4-204ENST00000561662 CHRNA2Q15822 529 aa27.1■■□□□ 1.93
COMMD4-204ENST00000561662 TRAK1Q9UPV9 953 aa27.1■■□□□ 1.93
COMMD4-204ENST00000561662 STRN4Q9NRL3 753 aa27.09■■□□□ 1.93
COMMD4-204ENST00000561662 APBA3O96018 575 aa27.08■■□□□ 1.93
COMMD4-204ENST00000561662 ADGRB2O60241 1585 aa27.07■■□□□ 1.92
COMMD4-204ENST00000561662 NGDNQ8NEJ9 315 aaKnown RBP27.07■■□□□ 1.92
COMMD4-204ENST00000561662 USP35Q9P2H5 1018 aa27.07■■□□□ 1.92
COMMD4-204ENST00000561662 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
COMMD4-204ENST00000561662 YY1P25490 414 aa27.05■■□□□ 1.92
COMMD4-204ENST00000561662 FAM196AQ6ZSG2 479 aa27.04■■□□□ 1.92
COMMD4-204ENST00000561662 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
COMMD4-204ENST00000561662 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
COMMD4-204ENST00000561662 CRYBG1Q9Y4K1 1723 aa27.04■■□□□ 1.92
COMMD4-204ENST00000561662 NUTM2GQ5VZR2 741 aa27.03■■□□□ 1.92
COMMD4-204ENST00000561662 ZC3H6P61129 1189 aaKnown RBP27.02■■□□□ 1.92
COMMD4-204ENST00000561662 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
COMMD4-204ENST00000561662 TULP4Q9NRJ4 1543 aa27■■□□□ 1.91
COMMD4-204ENST00000561662 ADGRB1O14514 1584 aa26.98■■□□□ 1.91
COMMD4-204ENST00000561662 PDE3BQ13370 1112 aa26.96■■□□□ 1.91
COMMD4-204ENST00000561662 KDM2AQ9Y2K7 1162 aa26.96■■□□□ 1.91
COMMD4-204ENST00000561662 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
COMMD4-204ENST00000561662 EVA1CP58658 441 aa26.94■■□□□ 1.9
COMMD4-204ENST00000561662 PPP1R1BQ9UD71 204 aaPredicted RBP26.93■■□□□ 1.9
COMMD4-204ENST00000561662 PARD3Q8TEW0 1356 aa26.93■■□□□ 1.9
COMMD4-204ENST00000561662 NUP188Q5SRE5 1749 aa26.93■■□□□ 1.9
COMMD4-204ENST00000561662 RREB1Q92766 1687 aa26.92■■□□□ 1.9
COMMD4-204ENST00000561662 NBPF8Q3BBV2 869 aa26.92■■□□□ 1.9
COMMD4-204ENST00000561662 NBPF14Q5TI25 921 aa26.92■■□□□ 1.9
COMMD4-204ENST00000561662 PHRF1Q9P1Y6 1649 aaKnown RBP26.91■■□□□ 1.9
COMMD4-204ENST00000561662 LARP1Q6PKG0 1096 aaKnown RBP26.91■■□□□ 1.9
COMMD4-204ENST00000561662 NUDT16Q96DE0 195 aaKnown RBP26.9■■□□□ 1.9
COMMD4-204ENST00000561662 SSH2Q76I76 1423 aa26.9■■□□□ 1.9
COMMD4-204ENST00000561662 BARGINQ6ZT62 677 aa26.87■■□□□ 1.89
COMMD4-204ENST00000561662 SPON1Q9HCB6 807 aa26.87■■□□□ 1.89
COMMD4-204ENST00000561662 ATP7BP35670 1465 aa26.87■■□□□ 1.89
COMMD4-204ENST00000561662 DCAF11Q8TEB1 546 aa26.86■■□□□ 1.89
COMMD4-204ENST00000561662 TCP11L2Q8N4U5 519 aa26.85■■□□□ 1.89
COMMD4-204ENST00000561662 KCNQ2O43526 872 aa26.84■■□□□ 1.89
COMMD4-204ENST00000561662 CAMTA1Q9Y6Y1 1673 aa26.84■■□□□ 1.89
COMMD4-204ENST00000561662 ACEP12821 1306 aa26.82■■□□□ 1.88
COMMD4-204ENST00000561662 ITSN1Q15811 1721 aa26.82■■□□□ 1.88
COMMD4-204ENST00000561662 CDK19Q9BWU1 502 aa26.81■■□□□ 1.88
COMMD4-204ENST00000561662 DCAF8L1A6NGE4 600 aa26.8■■□□□ 1.88
COMMD4-204ENST00000561662 ABTB2Q8N961 1025 aa26.8■■□□□ 1.88
COMMD4-204ENST00000561662 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
COMMD4-204ENST00000561662 ZBTB7CA1YPR0 619 aa26.79■■□□□ 1.88
COMMD4-204ENST00000561662 ARHGEF28Q8N1W1 1705 aaKnown RBP26.77■■□□□ 1.88
COMMD4-204ENST00000561662 NINLQ9Y2I6 1382 aa26.76■■□□□ 1.87
COMMD4-204ENST00000561662 ANO8Q9HCE9 1232 aaPredicted RBP26.76■■□□□ 1.87
COMMD4-204ENST00000561662 POLR3AO14802 1390 aaPredicted RBP26.75■■□□□ 1.87
COMMD4-204ENST00000561662 PDGFDQ9GZP0 370 aaPredicted RBP26.75■■□□□ 1.87
COMMD4-204ENST00000561662 LMO7Q8WWI1 1683 aa26.74■■□□□ 1.87
COMMD4-204ENST00000561662 PTF1AQ7RTS3 328 aa26.74■■□□□ 1.87
COMMD4-204ENST00000561662 CPDO75976 1380 aa26.72■■□□□ 1.87
COMMD4-204ENST00000561662 THRAP3Q9Y2W1 955 aaKnown RBP26.72■■□□□ 1.87
COMMD4-204ENST00000561662 USP19O94966 1318 aa26.71■■□□□ 1.87
COMMD4-204ENST00000561662 GCP02774 474 aa26.71■■□□□ 1.87
COMMD4-204ENST00000561662 CCDC61Q9Y6R9 512 aa26.71■■□□□ 1.87
COMMD4-204ENST00000561662 UTRNP46939 3433 aa26.71■■□□□ 1.87
COMMD4-204ENST00000561662 COL5A2P05997 1499 aaPredicted RBP26.7■■□□□ 1.87
COMMD4-204ENST00000561662 ZBTB7AO95365 584 aa26.7■■□□□ 1.86
COMMD4-204ENST00000561662 PARP4Q9UKK3 1724 aaKnown RBP26.7■■□□□ 1.86
COMMD4-204ENST00000561662 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
COMMD4-204ENST00000561662 TOPAZ1Q8N9V7 1692 aa26.7■■□□□ 1.86
COMMD4-204ENST00000561662 OVOS2A0A0G2JMS6 1433 aa26.68■■□□□ 1.86
COMMD4-204ENST00000561662 OVOS2A0A0J9YW53 1432 aa26.68■■□□□ 1.86
COMMD4-204ENST00000561662 OVOS2Q6IE36 1432 aa26.68■■□□□ 1.86
COMMD4-204ENST00000561662 PLEKHG3A1L390 1219 aa26.68■■□□□ 1.86
COMMD4-204ENST00000561662 NLRP13Q86W25 1043 aa26.67■■□□□ 1.86
COMMD4-204ENST00000561662 BCL11BQ9C0K0 894 aaPredicted RBP26.67■■□□□ 1.86
COMMD4-204ENST00000561662 CRB1P82279 1406 aa26.66■■□□□ 1.86
COMMD4-204ENST00000561662 PEAK1Q9H792 1746 aa26.66■■□□□ 1.86
COMMD4-204ENST00000561662 ATF5Q9Y2D1 282 aaPredicted RBP26.66■■□□□ 1.86
COMMD4-204ENST00000561662 PLSCR1O15162 318 aa26.64■■□□□ 1.86
COMMD4-204ENST00000561662 DDB1Q16531 1140 aa26.64■■□□□ 1.86
COMMD4-204ENST00000561662 CASZ1Q86V15 1759 aa26.63■■□□□ 1.85
COMMD4-204ENST00000561662 PROM2Q8N271 834 aa26.63■■□□□ 1.85
COMMD4-204ENST00000561662 LRRC37A3O60309 1634 aa26.62■■□□□ 1.85
COMMD4-204ENST00000561662 SRPK2P78362 688 aaKnown RBP26.62■■□□□ 1.85
COMMD4-204ENST00000561662 TOM1L2Q6ZVM7 507 aa26.62■■□□□ 1.85
COMMD4-204ENST00000561662 ZNF784Q8NCA9 323 aaPredicted RBP26.62■■□□□ 1.85
COMMD4-204ENST00000561662 SBF2Q86WG5 1849 aa26.62■■□□□ 1.85
COMMD4-204ENST00000561662 MYOM1P52179 1685 aa26.61■■□□□ 1.85
COMMD4-204ENST00000561662 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
COMMD4-204ENST00000561662 C11orf95C9JLR9 678 aaPredicted RBP26.6■■□□□ 1.85
COMMD4-204ENST00000561662 PTGER2P43116 358 aa26.6■■□□□ 1.85
COMMD4-204ENST00000561662 CABP2Q9NPB3 220 aa26.6■■□□□ 1.85
COMMD4-204ENST00000561662 MARCH10Q8NA82 808 aaPredicted RBP26.59■■□□□ 1.85
COMMD4-204ENST00000561662 NLRP6P59044 892 aa26.58■■□□□ 1.85
COMMD4-204ENST00000561662 RGPD3A6NKT7 1758 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms