RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	PLEKHH1	Q9ULM0	1364 aa		13.88	□□□□□ -0.19
KNSTRN-215	ENST00000561367	ATF3	P18847	181 aa		13.88	□□□□□ -0.19
KNSTRN-215	ENST00000561367	PUS7	Q96PZ0	661 aa	Known RBP	13.88	□□□□□ -0.19
KNSTRN-215	ENST00000561367	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.88	□□□□□ -0.19
KNSTRN-215	ENST00000561367	ST20-MTHFS	A0A0A6YYL1	179 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	CDCA8	Q53HL2	280 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	IFNL1	Q8IU54	200 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	PCDHB13	Q9Y5F0	798 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	QRICH2	Q9H0J4	1663 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	EVC2	Q86UK5	1308 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	NALCN	Q8IZF0	1738 aa		13.87	□□□□□ -0.19
KNSTRN-215	ENST00000561367	PYGB	P11216	843 aa		13.86	□□□□□ -0.19
KNSTRN-215	ENST00000561367	ATN1	P54259	1190 aa	Predicted RBP	13.86	□□□□□ -0.19
KNSTRN-215	ENST00000561367	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.86	□□□□□ -0.19
KNSTRN-215	ENST00000561367	XIRP1	Q702N8	1843 aa	Known RBP	13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	ANKAR	Q7Z5J8	1434 aa		13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	WASL	O00401	505 aa	Predicted RBP	13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	TOM1	O60784	492 aa		13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	TMF1	P82094	1093 aa		13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	TESK2	Q96S53	571 aa		13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.85	□□□□□ -0.19
KNSTRN-215	ENST00000561367	HSPA5	P11021	654 aa	Known RBP	13.84	□□□□□ -0.19
KNSTRN-215	ENST00000561367	RBM33	Q96EV2	1170 aa	Known RBP	13.83	□□□□□ -0.2
KNSTRN-215	ENST00000561367	SGIP1	Q9BQI5	828 aa		13.83	□□□□□ -0.2
KNSTRN-215	ENST00000561367	TULP4	Q9NRJ4	1543 aa		13.82	□□□□□ -0.2
KNSTRN-215	ENST00000561367	POTEB2	H3BUK9	544 aa		13.82	□□□□□ -0.2
KNSTRN-215	ENST00000561367	ATAD2	Q6PL18	1390 aa		13.82	□□□□□ -0.2
KNSTRN-215	ENST00000561367	SPOCK2	Q92563	424 aa		13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	CDK19	Q9BWU1	502 aa		13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	SLAIN2	Q9P270	581 aa		13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	FMN2	Q9NZ56	1722 aa		13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	MST1R	Q04912	1400 aa		13.81	□□□□□ -0.2
KNSTRN-215	ENST00000561367	TIE1	P35590	1138 aa		13.8	□□□□□ -0.2
KNSTRN-215	ENST00000561367	SRPK2	P78362	688 aa	Known RBP	13.8	□□□□□ -0.2
KNSTRN-215	ENST00000561367	NINL	Q9Y2I6	1382 aa		13.8	□□□□□ -0.2
KNSTRN-215	ENST00000561367	C1orf167	Q5SNV9	1468 aa		13.79	□□□□□ -0.2
KNSTRN-215	ENST00000561367	TTLL13P	A6NNM8	815 aa		13.78	□□□□□ -0.2
KNSTRN-215	ENST00000561367	UBAP1L	F5GYI3	381 aa		13.78	□□□□□ -0.2
KNSTRN-215	ENST00000561367	ATP7B	P35670	1465 aa		13.77	□□□□□ -0.21
KNSTRN-215	ENST00000561367	NUDT16	Q96DE0	195 aa	Known RBP	13.77	□□□□□ -0.21
KNSTRN-215	ENST00000561367	METRN	Q9UJH8	293 aa		13.77	□□□□□ -0.21
KNSTRN-215	ENST00000561367	ITSN1	Q15811	1721 aa		13.76	□□□□□ -0.21
KNSTRN-215	ENST00000561367	GSE1	Q14687	1217 aa		13.76	□□□□□ -0.21
KNSTRN-215	ENST00000561367	DISP3	Q9P2K9	1392 aa		13.75	□□□□□ -0.21
KNSTRN-215	ENST00000561367	KIF1A	Q12756	1690 aa		13.75	□□□□□ -0.21
KNSTRN-215	ENST00000561367	PLEKHG3	A1L390	1219 aa		13.74	□□□□□ -0.21
KNSTRN-215	ENST00000561367	ESCO1	Q5FWF5	840 aa		13.74	□□□□□ -0.21
KNSTRN-215	ENST00000561367	CABP2	Q9NPB3	220 aa		13.74	□□□□□ -0.21
KNSTRN-215	ENST00000561367	PCDHB8	Q9UN66	801 aa		13.74	□□□□□ -0.21
KNSTRN-215	ENST00000561367	BRD4	O60885	1362 aa	Predicted RBP	13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	PRR36	Q9H6K5	1346 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	USP32	Q8NFA0	1604 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	BRINP3	Q76B58	766 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	SLC39A7	Q92504	469 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	PHF8	Q9UPP1	1060 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	PPIP5K1	Q6PFW1	1433 aa		13.73	□□□□□ -0.21
KNSTRN-215	ENST00000561367	TOPAZ1	Q8N9V7	1692 aa		13.72	□□□□□ -0.21
KNSTRN-215	ENST00000561367	POLR3A	O14802	1390 aa	Predicted RBP	13.72	□□□□□ -0.21
KNSTRN-215	ENST00000561367	NPHP3	Q7Z494	1330 aa		13.72	□□□□□ -0.21
KNSTRN-215	ENST00000561367	POTEF	A5A3E0	1075 aa		13.72	□□□□□ -0.21
KNSTRN-215	ENST00000561367	TERF2IP	Q9NYB0	399 aa		13.71	□□□□□ -0.21
KNSTRN-215	ENST00000561367	NUTM2F	A1L443	756 aa		13.7	□□□□□ -0.22
KNSTRN-215	ENST00000561367	C7	P10643	843 aa		13.7	□□□□□ -0.22
KNSTRN-215	ENST00000561367	FBXO41	Q8TF61	875 aa		13.7	□□□□□ -0.22
KNSTRN-215	ENST00000561367	ORAI2	Q96SN7	254 aa		13.7	□□□□□ -0.22
KNSTRN-215	ENST00000561367	ROBO1	Q9Y6N7	1651 aa		13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	KIF7	Q2M1P5	1343 aa		13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	POTEJ	P0CG39	1038 aa		13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	NGDN	Q8NEJ9	315 aa	Known RBP	13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	CABP1	Q9NZU7	370 aa		13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	CCDC7	Q96M83	1385 aa		13.69	□□□□□ -0.22
KNSTRN-215	ENST00000561367	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	CHRM1	P11229	460 aa	Predicted RBP	13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	PSME1	Q06323	249 aa		13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	TMEM106C	Q9BVX2	250 aa		13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	TRIM35	Q9UPQ4	493 aa		13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	ANKRD36B	Q8N2N9	1353 aa		13.68	□□□□□ -0.22
KNSTRN-215	ENST00000561367	ACE	P12821	1306 aa		13.67	□□□□□ -0.22
KNSTRN-215	ENST00000561367	CPSF1	Q10570	1443 aa	Known RBP	13.67	□□□□□ -0.22
KNSTRN-215	ENST00000561367	PIP4K2B	P78356	416 aa		13.67	□□□□□ -0.22
KNSTRN-215	ENST00000561367	TMC1	Q8TDI8	760 aa		13.67	□□□□□ -0.22
KNSTRN-215	ENST00000561367	NHSL1	Q5SYE7	1610 aa		13.67	□□□□□ -0.22
KNSTRN-215	ENST00000561367	WASHC2A	Q641Q2	1341 aa		13.66	□□□□□ -0.22
KNSTRN-215	ENST00000561367	RGPD8	O14715	1765 aa	Predicted RBP	13.66	□□□□□ -0.22
KNSTRN-215	ENST00000561367	C11orf95	C9JLR9	678 aa	Predicted RBP	13.66	□□□□□ -0.22
KNSTRN-215	ENST00000561367	FOXO3	O43524	673 aa		13.66	□□□□□ -0.22
KNSTRN-215	ENST00000561367	SBNO1	A3KN83	1393 aa		13.66	□□□□□ -0.22
KNSTRN-215	ENST00000561367	SOS2	Q07890	1332 aa	Predicted RBP	13.65	□□□□□ -0.22
KNSTRN-215	ENST00000561367	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.65	□□□□□ -0.22
KNSTRN-215	ENST00000561367	PMFBP1	Q8TBY8	1022 aa		13.65	□□□□□ -0.22
KNSTRN-215	ENST00000561367	OTUD5	Q96G74	571 aa		13.65	□□□□□ -0.22
KNSTRN-215	ENST00000561367	SLC12A5	Q9H2X9	1139 aa		13.65	□□□□□ -0.22
KNSTRN-215	ENST00000561367	USP6	P35125	1406 aa		13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	MYOM1	P52179	1685 aa		13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	KTN1	Q86UP2	1357 aa	Known RBP	13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	LRRC59	Q96AG4	307 aa	Known RBP	13.64	□□□□□ -0.23

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