RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 FMN2Q9NZ56 1722 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-211ENST00000561010 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-211ENST00000561010 ORAI2Q96SN7 254 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
GABPB1-211ENST00000561010 STK26Q9P289 416 aa10.83□□□□□ -0.68
GABPB1-211ENST00000561010 CCDC144AA2RUR9 1427 aa10.83□□□□□ -0.68
GABPB1-211ENST00000561010 SPATA31E1Q6ZUB1 1445 aa10.83□□□□□ -0.68
GABPB1-211ENST00000561010 AFF2P51816 1311 aa10.83□□□□□ -0.68
GABPB1-211ENST00000561010 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
GABPB1-211ENST00000561010 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
GABPB1-211ENST00000561010 COL22A1Q8NFW1 1626 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-211ENST00000561010 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
GABPB1-211ENST00000561010 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
GABPB1-211ENST00000561010 RNF25Q96BH1 459 aaPredicted RBP10.81□□□□□ -0.68
GABPB1-211ENST00000561010 C8orf37Q96NL8 207 aa10.81□□□□□ -0.68
GABPB1-211ENST00000561010 RPGRIP1LQ68CZ1 1315 aa10.81□□□□□ -0.68
GABPB1-211ENST00000561010 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
GABPB1-211ENST00000561010 ADAMTS2O95450 1211 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-211ENST00000561010 ZNF772Q68DY9 489 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-211ENST00000561010 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 LRRC59Q96AG4 307 aaKnown RBP10.8□□□□□ -0.68
GABPB1-211ENST00000561010 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 PRAG1Q86YV5 1406 aa10.8□□□□□ -0.68
GABPB1-211ENST00000561010 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
GABPB1-211ENST00000561010 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
GABPB1-211ENST00000561010 RXRBP28702 533 aa10.78□□□□□ -0.68
GABPB1-211ENST00000561010 RGS12O14924 1447 aa10.77□□□□□ -0.68
GABPB1-211ENST00000561010 PIK3C2GO75747 1445 aa10.77□□□□□ -0.68
GABPB1-211ENST00000561010 KIF1AQ12756 1690 aa10.77□□□□□ -0.69
GABPB1-211ENST00000561010 PXDNQ92626 1479 aa10.77□□□□□ -0.69
GABPB1-211ENST00000561010 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
GABPB1-211ENST00000561010 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
GABPB1-211ENST00000561010 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-211ENST00000561010 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
GABPB1-211ENST00000561010 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
GABPB1-211ENST00000561010 USP32Q8NFA0 1604 aa10.76□□□□□ -0.69
GABPB1-211ENST00000561010 LRPPRCP42704 1394 aaKnown RBP10.76□□□□□ -0.69
GABPB1-211ENST00000561010 TECPR2O15040 1411 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 YTHDC2Q9H6S0 1430 aaKnown RBP10.75□□□□□ -0.69
GABPB1-211ENST00000561010 FOXO3O43524 673 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 QTRT2Q9H974 415 aaKnown RBP10.75□□□□□ -0.69
GABPB1-211ENST00000561010 PLCH1Q4KWH8 1693 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
GABPB1-211ENST00000561010 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
GABPB1-211ENST00000561010 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.74□□□□□ -0.69
GABPB1-211ENST00000561010 MYOM2P54296 1465 aa10.74□□□□□ -0.69
GABPB1-211ENST00000561010 CDK12Q9NYV4 1490 aaPredicted RBP10.74□□□□□ -0.69
GABPB1-211ENST00000561010 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
GABPB1-211ENST00000561010 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
GABPB1-211ENST00000561010 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
GABPB1-211ENST00000561010 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
GABPB1-211ENST00000561010 ARHGEF28Q8N1W1 1705 aaKnown RBP10.72□□□□□ -0.69
GABPB1-211ENST00000561010 ABCC11Q96J66 1382 aa10.72□□□□□ -0.69
GABPB1-211ENST00000561010 RBM6P78332 1123 aaKnown RBP10.71□□□□□ -0.69
GABPB1-211ENST00000561010 NPHP3Q7Z494 1330 aa10.71□□□□□ -0.69
GABPB1-211ENST00000561010 EP400Q96L91 3159 aa10.71□□□□□ -0.69
GABPB1-211ENST00000561010 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
GABPB1-211ENST00000561010 TRPM3Q9HCF6 1732 aaPredicted RBP10.71□□□□□ -0.69
GABPB1-211ENST00000561010 USP21Q9UK80 565 aa10.71□□□□□ -0.69
GABPB1-211ENST00000561010 C14orf93Q9H972 538 aaKnown RBP10.7□□□□□ -0.7
GABPB1-211ENST00000561010 ADGRB1O14514 1584 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 GLI3P10071 1580 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 ATRNO75882 1429 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 KDM2AQ9Y2K7 1162 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 CRYBG1Q9Y4K1 1723 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 ALS2Q96Q42 1657 aa10.69□□□□□ -0.7
GABPB1-211ENST00000561010 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 NWD2Q9ULI1 1742 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 IER5LQ5T953 404 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 CABLES1Q8TDN4 633 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 ADGRB2O60241 1585 aa10.68□□□□□ -0.7
GABPB1-211ENST00000561010 ITSN1Q15811 1721 aa10.67□□□□□ -0.7
GABPB1-211ENST00000561010 NRAPQ86VF7 1730 aa10.67□□□□□ -0.7
GABPB1-211ENST00000561010 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
GABPB1-211ENST00000561010 STK25O00506 426 aa10.67□□□□□ -0.7
GABPB1-211ENST00000561010 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
GABPB1-211ENST00000561010 FNBP4Q8N3X1 1017 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-211ENST00000561010 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-211ENST00000561010 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
GABPB1-211ENST00000561010 SPATA31A3Q5VYP0 1347 aa10.66□□□□□ -0.7
GABPB1-211ENST00000561010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-211ENST00000561010 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
GABPB1-211ENST00000561010 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-211ENST00000561010 TRPC5Q9UL62 973 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-211ENST00000561010 TRAK1Q9UPV9 953 aa10.66□□□□□ -0.7
GABPB1-211ENST00000561010 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms