RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 PHF8Q9UPP1 1060 aa30.1■■■□□ 2.41
SNX22-205ENST00000560945 LRRC7Q96NW7 1537 aa30.09■■■□□ 2.41
SNX22-205ENST00000560945 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
SNX22-205ENST00000560945 ESCO1Q5FWF5 840 aa30.09■■■□□ 2.41
SNX22-205ENST00000560945 ORAI2Q96SN7 254 aa30.08■■■□□ 2.41
SNX22-205ENST00000560945 NCOA3Q9Y6Q9 1424 aa30.07■■■□□ 2.4
SNX22-205ENST00000560945 FBLN1P23142 703 aa30.06■■■□□ 2.4
SNX22-205ENST00000560945 HNRNPUQ00839 825 aaKnown RBP eCLIP30.05■■■□□ 2.4
SNX22-205ENST00000560945 C1orf167Q5SNV9 1468 aa30.04■■■□□ 2.4
SNX22-205ENST00000560945 MTHFSP49914 203 aa30.03■■■□□ 2.4
SNX22-205ENST00000560945 MST1RQ04912 1400 aa30.03■■■□□ 2.4
SNX22-205ENST00000560945 ATF3P18847 181 aa30.02■■■□□ 2.4
SNX22-205ENST00000560945 SENP3-EIF4A1A0A087X0R7 540 aa30.01■■■□□ 2.4
SNX22-205ENST00000560945 CENPBP07199 599 aaPredicted RBP30.01■■■□□ 2.4
SNX22-205ENST00000560945 DCCP43146 1447 aa30.01■■■□□ 2.39
SNX22-205ENST00000560945 MSH6P52701 1360 aa30■■■□□ 2.39
SNX22-205ENST00000560945 COG3Q96JB2 828 aa29.99■■■□□ 2.39
SNX22-205ENST00000560945 OVOS2A0A0J9YW53 1432 aa29.97■■■□□ 2.39
SNX22-205ENST00000560945 OVOS2Q6IE36 1432 aa29.97■■■□□ 2.39
SNX22-205ENST00000560945 TTC21AQ8NDW8 1320 aa29.96■■■□□ 2.39
SNX22-205ENST00000560945 LTBP4Q8N2S1 1624 aa29.95■■■□□ 2.39
SNX22-205ENST00000560945 FOXO3O43524 673 aa29.95■■■□□ 2.39
SNX22-205ENST00000560945 ADAMTS8Q9UP79 889 aa29.95■■■□□ 2.39
SNX22-205ENST00000560945 PIK3C2AO00443 1686 aa29.95■■■□□ 2.38
SNX22-205ENST00000560945 XPCQ01831 940 aaPredicted RBP29.94■■■□□ 2.38
SNX22-205ENST00000560945 CADPS2Q86UW7 1296 aa29.94■■■□□ 2.38
SNX22-205ENST00000560945 PAK3O75914 559 aaPredicted RBP29.92■■■□□ 2.38
SNX22-205ENST00000560945 NUTM2GQ5VZR2 741 aa29.92■■■□□ 2.38
SNX22-205ENST00000560945 POLKQ9UBT6 870 aa29.92■■■□□ 2.38
SNX22-205ENST00000560945 SCAF1Q9H7N4 1312 aaKnown RBP29.92■■■□□ 2.38
SNX22-205ENST00000560945 PSME1Q06323 249 aa29.92■■■□□ 2.38
SNX22-205ENST00000560945 WDR43Q15061 677 aaKnown RBP eCLIP29.92■■■□□ 2.38
SNX22-205ENST00000560945 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
SNX22-205ENST00000560945 EMILIN1Q9Y6C2 1016 aa29.9■■■□□ 2.38
SNX22-205ENST00000560945 DDX17Q92841 729 aaKnown RBP29.89■■■□□ 2.38
SNX22-205ENST00000560945 RRS1Q15050 365 aaKnown RBP29.89■■■□□ 2.38
SNX22-205ENST00000560945 COL3A1P02461 1466 aaPredicted RBP29.89■■■□□ 2.37
SNX22-205ENST00000560945 USP31Q70CQ4 1352 aa29.88■■■□□ 2.37
SNX22-205ENST00000560945 KIF1AQ12756 1690 aa29.88■■■□□ 2.37
SNX22-205ENST00000560945 AATKQ6ZMQ8 1374 aa29.87■■■□□ 2.37
SNX22-205ENST00000560945 BLMP54132 1417 aaPredicted RBP29.87■■■□□ 2.37
SNX22-205ENST00000560945 PPM1GO15355 546 aaPredicted RBP29.87■■■□□ 2.37
SNX22-205ENST00000560945 SOX12O15370 315 aa29.87■■■□□ 2.37
SNX22-205ENST00000560945 CFAP53Q96M91 514 aa29.87■■■□□ 2.37
SNX22-205ENST00000560945 NLRP6P59044 892 aa29.86■■■□□ 2.37
SNX22-205ENST00000560945 ABTB2Q8N961 1025 aa29.86■■■□□ 2.37
SNX22-205ENST00000560945 MARF1Q9Y4F3 1742 aaKnown RBP29.85■■■□□ 2.37
SNX22-205ENST00000560945 KRT28Q7Z3Y7 464 aa29.84■■■□□ 2.37
SNX22-205ENST00000560945 MAP2P11137 1827 aaKnown RBP29.83■■■□□ 2.37
SNX22-205ENST00000560945 SMG6Q86US8 1419 aaKnown RBP29.83■■■□□ 2.37
SNX22-205ENST00000560945 PNPLA6Q8IY17 1366 aa29.82■■■□□ 2.36
SNX22-205ENST00000560945 CCDC146Q8IYE0 955 aa29.81■■■□□ 2.36
SNX22-205ENST00000560945 TRPM3Q9HCF6 1732 aaPredicted RBP29.81■■■□□ 2.36
SNX22-205ENST00000560945 ZBED9Q6R2W3 1325 aa29.8■■■□□ 2.36
SNX22-205ENST00000560945 INSRP06213 1382 aa29.8■■■□□ 2.36
SNX22-205ENST00000560945 BRINP3Q76B58 766 aa29.8■■■□□ 2.36
SNX22-205ENST00000560945 SLAIN2Q9P270 581 aa29.79■■■□□ 2.36
SNX22-205ENST00000560945 USP54Q70EL1 1684 aa29.79■■■□□ 2.36
SNX22-205ENST00000560945 SALL2Q9Y467 1007 aaPredicted RBP29.78■■■□□ 2.36
SNX22-205ENST00000560945 CDK12Q9NYV4 1490 aaPredicted RBP29.76■■■□□ 2.35
SNX22-205ENST00000560945 PEAK1Q9H792 1746 aa29.76■■■□□ 2.35
SNX22-205ENST00000560945 DIAPH1O60610 1272 aaKnown RBP29.74■■■□□ 2.35
SNX22-205ENST00000560945 PLEKHG5O94827 1062 aa29.74■■■□□ 2.35
SNX22-205ENST00000560945 LMOD2Q6P5Q4 547 aa29.74■■■□□ 2.35
SNX22-205ENST00000560945 MAP3K19Q56UN5 1328 aa29.73■■■□□ 2.35
SNX22-205ENST00000560945 U2SURPO15042 1029 aaKnown RBP29.73■■■□□ 2.35
SNX22-205ENST00000560945 U2AF1L5P0DN76 240 aaPredicted RBP29.72■■■□□ 2.35
SNX22-205ENST00000560945 U2AF1Q01081 240 aaKnown RBP eCLIP29.72■■■□□ 2.35
SNX22-205ENST00000560945 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
SNX22-205ENST00000560945 PXDNQ92626 1479 aa29.71■■■□□ 2.35
SNX22-205ENST00000560945 IL13P35225 146 aa29.68■■■□□ 2.34
SNX22-205ENST00000560945 NUDCQ9Y266 331 aa29.68■■■□□ 2.34
SNX22-205ENST00000560945 ALS2Q96Q42 1657 aa29.68■■■□□ 2.34
SNX22-205ENST00000560945 HSP90AB2PQ58FF8 381 aa29.67■■■□□ 2.34
SNX22-205ENST00000560945 APAF1O14727 1248 aa29.66■■■□□ 2.34
SNX22-205ENST00000560945 NFAT5O94916 1531 aa29.66■■■□□ 2.34
SNX22-205ENST00000560945 SBNO1A3KN83 1393 aa29.65■■■□□ 2.34
SNX22-205ENST00000560945 SLIT3O75094 1523 aa29.63■■■□□ 2.33
SNX22-205ENST00000560945 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
SNX22-205ENST00000560945 EIF4A2Q14240 407 aaKnown RBP29.63■■■□□ 2.33
SNX22-205ENST00000560945 USP19O94966 1318 aa29.63■■■□□ 2.33
SNX22-205ENST00000560945 AMPHP49418 695 aa29.61■■■□□ 2.33
SNX22-205ENST00000560945 CERKQ8TCT0 537 aa29.61■■■□□ 2.33
SNX22-205ENST00000560945 RUNDC1Q96C34 613 aa29.61■■■□□ 2.33
SNX22-205ENST00000560945 MED1Q15648 1581 aaPredicted RBP29.61■■■□□ 2.33
SNX22-205ENST00000560945 SPATA31A3Q5VYP0 1347 aa29.61■■■□□ 2.33
SNX22-205ENST00000560945 FLT4P35916 1363 aa29.61■■■□□ 2.33
SNX22-205ENST00000560945 GCP02774 474 aa29.6■■■□□ 2.33
SNX22-205ENST00000560945 IQSEC2Q5JU85 1478 aa29.6■■■□□ 2.33
SNX22-205ENST00000560945 HMOX1P09601 288 aa29.59■■■□□ 2.33
SNX22-205ENST00000560945 HOXC9P31274 260 aa29.59■■■□□ 2.33
SNX22-205ENST00000560945 PLEKHF1Q96S99 279 aa29.59■■■□□ 2.33
SNX22-205ENST00000560945 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
SNX22-205ENST00000560945 ZBTB7CA1YPR0 619 aa29.58■■■□□ 2.33
SNX22-205ENST00000560945 KCNH5Q8NCM2 988 aa29.58■■■□□ 2.33
SNX22-205ENST00000560945 RRP7AQ9Y3A4 280 aaKnown RBP29.58■■■□□ 2.33
SNX22-205ENST00000560945 CABLES1Q8TDN4 633 aa29.57■■■□□ 2.32
SNX22-205ENST00000560945 LTN1O94822 1766 aa29.56■■■□□ 2.32
SNX22-205ENST00000560945 TCP11L2Q8N4U5 519 aa29.56■■■□□ 2.32
SNX22-205ENST00000560945 RSPH6AQ9H0K4 717 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms