RNA–Protein interactions for RNA: ENST00000560894.1

THBS1-208, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-208ENST00000560894 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
THBS1-208ENST00000560894 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
THBS1-208ENST00000560894 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
THBS1-208ENST00000560894 KMT5BQ4FZB7 885 aa8.17□□□□□ -1.1
THBS1-208ENST00000560894 HDGFL1Q5TGJ6 251 aa8.17□□□□□ -1.1
THBS1-208ENST00000560894 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
THBS1-208ENST00000560894 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
THBS1-208ENST00000560894 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
THBS1-208ENST00000560894 KCNC4Q03721 635 aa8.16□□□□□ -1.1
THBS1-208ENST00000560894 VAC14Q08AM6 782 aa8.16□□□□□ -1.1
THBS1-208ENST00000560894 RSF1Q96T23 1441 aaPredicted RBP8.16□□□□□ -1.1
THBS1-208ENST00000560894 CEP164Q9UPV0 1460 aa8.16□□□□□ -1.1
THBS1-208ENST00000560894 URB2Q14146 1524 aaKnown RBP8.15□□□□□ -1.1
THBS1-208ENST00000560894 BCAMP50895 628 aa8.15□□□□□ -1.1
THBS1-208ENST00000560894 PDE4CQ08493 712 aa8.15□□□□□ -1.1
THBS1-208ENST00000560894 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
THBS1-208ENST00000560894 LCE2BO14633 110 aa8.14□□□□□ -1.11
THBS1-208ENST00000560894 RFX1P22670 979 aa8.14□□□□□ -1.11
THBS1-208ENST00000560894 SYMPKQ92797 1274 aaKnown RBP8.14□□□□□ -1.11
THBS1-208ENST00000560894 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
THBS1-208ENST00000560894 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
THBS1-208ENST00000560894 ADAMTS19Q8TE59 1207 aa8.13□□□□□ -1.11
THBS1-208ENST00000560894 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
THBS1-208ENST00000560894 GPR37L1O60883 481 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 NR6A1Q15406 480 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 Q3C1V9 767 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 ZFRQ96KR1 1074 aaKnown RBP8.12□□□□□ -1.11
THBS1-208ENST00000560894 CHD1O14646 1710 aa8.12□□□□□ -1.11
THBS1-208ENST00000560894 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
THBS1-208ENST00000560894 WBP1LQ9NX94 342 aa8.11□□□□□ -1.11
THBS1-208ENST00000560894 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.1□□□□□ -1.11
THBS1-208ENST00000560894 SOX11P35716 441 aa8.1□□□□□ -1.11
THBS1-208ENST00000560894 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
THBS1-208ENST00000560894 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
THBS1-208ENST00000560894 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
THBS1-208ENST00000560894 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
THBS1-208ENST00000560894 CSB-PGBD3P0DP91 1061 aa8.09□□□□□ -1.11
THBS1-208ENST00000560894 SEMA3FQ13275 785 aa8.09□□□□□ -1.11
THBS1-208ENST00000560894 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
THBS1-208ENST00000560894 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
THBS1-208ENST00000560894 ACTN4O43707 911 aaKnown RBP8.08□□□□□ -1.12
THBS1-208ENST00000560894 GFRA3O60609 400 aa8.08□□□□□ -1.12
THBS1-208ENST00000560894 MORN1Q5T089 497 aa8.08□□□□□ -1.12
THBS1-208ENST00000560894 ALG2Q9H553 416 aa8.08□□□□□ -1.12
THBS1-208ENST00000560894 SLC27A5Q9Y2P5 690 aa8.08□□□□□ -1.12
THBS1-208ENST00000560894 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
THBS1-208ENST00000560894 LMOD1P29536 600 aaPredicted RBP8.07□□□□□ -1.12
THBS1-208ENST00000560894 EIF4G2P78344 907 aaKnown RBP eCLIP8.07□□□□□ -1.12
THBS1-208ENST00000560894 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
THBS1-208ENST00000560894 TSR3Q9UJK0 312 aaKnown RBP8.06□□□□□ -1.12
THBS1-208ENST00000560894 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
THBS1-208ENST00000560894 LMTK3Q96Q04 1460 aa8.06□□□□□ -1.12
THBS1-208ENST00000560894 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
THBS1-208ENST00000560894 FBXO41Q8TF61 875 aa8.05□□□□□ -1.12
THBS1-208ENST00000560894 EIF4G3O43432 1585 aaKnown RBP8.05□□□□□ -1.12
THBS1-208ENST00000560894 CLASP1Q7Z460 1538 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 NRG2O14511 850 aaPredicted RBP8.04□□□□□ -1.12
THBS1-208ENST00000560894 RNF19BQ6ZMZ0 732 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
THBS1-208ENST00000560894 IFT140Q96RY7 1462 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 ERCC6L2Q5T890 1561 aa8.04□□□□□ -1.12
THBS1-208ENST00000560894 TMCO4Q5TGY1 634 aa8.03□□□□□ -1.12
THBS1-208ENST00000560894 BLOC1S3Q6QNY0 202 aa8.03□□□□□ -1.12
THBS1-208ENST00000560894 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
THBS1-208ENST00000560894 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
THBS1-208ENST00000560894 KIF13AQ9H1H9 1805 aa8.02□□□□□ -1.13
THBS1-208ENST00000560894 PPP4CP60510 307 aa8.02□□□□□ -1.13
THBS1-208ENST00000560894 NR1H3Q13133 447 aa8.02□□□□□ -1.13
THBS1-208ENST00000560894 GZF1Q9H116 711 aaPredicted RBP8.02□□□□□ -1.13
THBS1-208ENST00000560894 HPS5Q9UPZ3 1129 aa8.02□□□□□ -1.13
THBS1-208ENST00000560894 HECW2Q9P2P5 1572 aa8.01□□□□□ -1.13
THBS1-208ENST00000560894 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
THBS1-208ENST00000560894 FKBPLQ9UIM3 349 aa8.01□□□□□ -1.13
THBS1-208ENST00000560894 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
THBS1-208ENST00000560894 MAFBQ9Y5Q3 323 aaPredicted RBP8.01□□□□□ -1.13
THBS1-208ENST00000560894 CFTRP13569 1480 aa8□□□□□ -1.13
THBS1-208ENST00000560894 ZBBXA8MT70 800 aa8□□□□□ -1.13
THBS1-208ENST00000560894 ATP9BO43861 1147 aa8□□□□□ -1.13
THBS1-208ENST00000560894 NR1I2O75469 434 aa8□□□□□ -1.13
THBS1-208ENST00000560894 BRD1O95696 1058 aa8□□□□□ -1.13
THBS1-208ENST00000560894 KCNA1Q09470 495 aa8□□□□□ -1.13
THBS1-208ENST00000560894 CDCA8Q53HL2 280 aa8□□□□□ -1.13
THBS1-208ENST00000560894 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
THBS1-208ENST00000560894 FBXO45P0C2W1 286 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 JUNDP17535 347 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 CTHP32929 405 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 SRPK2P78362 688 aaKnown RBP7.99□□□□□ -1.13
THBS1-208ENST00000560894 BRICD5Q6PL45 260 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 PRKD2Q9BZL6 878 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 MAP10Q9P2G4 905 aa7.99□□□□□ -1.13
THBS1-208ENST00000560894 SALL2Q9Y467 1007 aaPredicted RBP7.99□□□□□ -1.13
THBS1-208ENST00000560894 V9GY48 417 aaPredicted RBP7.99□□□□□ -1.13
THBS1-208ENST00000560894 AQRO60306 1485 aaKnown RBP eCLIP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms