RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 RPIAP49247 311 aa10.33□□□□□ -0.76
HMG20A-211ENST00000560867 PPP1R18Q6NYC8 613 aa10.33□□□□□ -0.76
HMG20A-211ENST00000560867 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-211ENST00000560867 CLUAP1Q96AJ1 413 aa10.33□□□□□ -0.76
HMG20A-211ENST00000560867 UNC93B1Q9H1C4 597 aa10.33□□□□□ -0.76
HMG20A-211ENST00000560867 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
HMG20A-211ENST00000560867 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
HMG20A-211ENST00000560867 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
HMG20A-211ENST00000560867 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
HMG20A-211ENST00000560867 ZBTB24O43167 697 aaPredicted RBP10.31□□□□□ -0.76
HMG20A-211ENST00000560867 TRAK2O60296 914 aa10.31□□□□□ -0.76
HMG20A-211ENST00000560867 GPR37L1O60883 481 aa10.31□□□□□ -0.76
HMG20A-211ENST00000560867 SOX11P35716 441 aa10.3□□□□□ -0.76
HMG20A-211ENST00000560867 ABL2P42684 1182 aa10.3□□□□□ -0.76
HMG20A-211ENST00000560867 EPS8L1Q8TE68 723 aa10.3□□□□□ -0.76
HMG20A-211ENST00000560867 A0A0G2JS52 829 aa10.29□□□□□ -0.76
HMG20A-211ENST00000560867 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
HMG20A-211ENST00000560867 PTK2Q05397 1052 aa10.28□□□□□ -0.76
HMG20A-211ENST00000560867 IRF5Q13568 498 aa10.28□□□□□ -0.76
HMG20A-211ENST00000560867 ZBBXA8MT70 800 aa10.27□□□□□ -0.77
HMG20A-211ENST00000560867 WNT7BP56706 349 aa10.27□□□□□ -0.77
HMG20A-211ENST00000560867 MCCD1P59942 119 aaPredicted RBP10.27□□□□□ -0.77
HMG20A-211ENST00000560867 NR1H3Q13133 447 aa10.27□□□□□ -0.77
HMG20A-211ENST00000560867 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
HMG20A-211ENST00000560867 TRIM32Q13049 653 aa10.25□□□□□ -0.77
HMG20A-211ENST00000560867 BPHLQ86WA6 291 aaPredicted RBP10.25□□□□□ -0.77
HMG20A-211ENST00000560867 ZNF511Q8NB15 262 aa10.25□□□□□ -0.77
HMG20A-211ENST00000560867 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
HMG20A-211ENST00000560867 CD2BP2O95400 341 aaKnown RBP10.24□□□□□ -0.77
HMG20A-211ENST00000560867 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
HMG20A-211ENST00000560867 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMG20A-211ENST00000560867 SH3RF1Q7Z6J0 888 aa10.23□□□□□ -0.77
HMG20A-211ENST00000560867 RGS20O76081 388 aa10.22□□□□□ -0.77
HMG20A-211ENST00000560867 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
HMG20A-211ENST00000560867 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
HMG20A-211ENST00000560867 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
HMG20A-211ENST00000560867 FBXO45P0C2W1 286 aa10.2□□□□□ -0.78
HMG20A-211ENST00000560867 BAP1Q92560 729 aa10.2□□□□□ -0.78
HMG20A-211ENST00000560867 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
HMG20A-211ENST00000560867 SH3BP2P78314 561 aa10.19□□□□□ -0.78
HMG20A-211ENST00000560867 C1QTNF2Q9BXJ5 285 aa10.19□□□□□ -0.78
HMG20A-211ENST00000560867 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
HMG20A-211ENST00000560867 SLC19A1P41440 591 aa10.18□□□□□ -0.78
HMG20A-211ENST00000560867 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
HMG20A-211ENST00000560867 VAC14Q08AM6 782 aa10.17□□□□□ -0.78
HMG20A-211ENST00000560867 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
HMG20A-211ENST00000560867 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
HMG20A-211ENST00000560867 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
HMG20A-211ENST00000560867 AGERQ15109 404 aa10.16□□□□□ -0.78
HMG20A-211ENST00000560867 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
HMG20A-211ENST00000560867 MPNDQ8N594 471 aa10.16□□□□□ -0.78
HMG20A-211ENST00000560867 SEMA3FQ13275 785 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 FAM174AQ8TBP5 190 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 ADAM32Q8TC27 787 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 OCSTAMPQ9BR26 566 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 ALG2Q9H553 416 aa10.15□□□□□ -0.78
HMG20A-211ENST00000560867 ZNF598Q86UK7 904 aaKnown RBP10.14□□□□□ -0.79
HMG20A-211ENST00000560867 GLMNQ92990 594 aa10.14□□□□□ -0.79
HMG20A-211ENST00000560867 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
HMG20A-211ENST00000560867 WNT7AO00755 349 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 SKOR1P84550 965 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 FOXJ1Q92949 421 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 EMID1Q96A84 441 aaPredicted RBP10.13□□□□□ -0.79
HMG20A-211ENST00000560867 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 CALR3Q96L12 384 aaKnown RBP10.13□□□□□ -0.79
HMG20A-211ENST00000560867 SERPINA10Q9UK55 444 aa10.13□□□□□ -0.79
HMG20A-211ENST00000560867 MAGEB6P1A0A0J9YX57 407 aa10.12□□□□□ -0.79
HMG20A-211ENST00000560867 POM121CA8CG34 1229 aa10.12□□□□□ -0.79
HMG20A-211ENST00000560867 TRIM52Q96A61 297 aa10.12□□□□□ -0.79
HMG20A-211ENST00000560867 ZNF777Q9ULD5 760 aaPredicted RBP10.12□□□□□ -0.79
HMG20A-211ENST00000560867 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
HMG20A-211ENST00000560867 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
HMG20A-211ENST00000560867 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
HMG20A-211ENST00000560867 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
HMG20A-211ENST00000560867 PRKD2Q9BZL6 878 aa10.11□□□□□ -0.79
HMG20A-211ENST00000560867 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
HMG20A-211ENST00000560867 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
HMG20A-211ENST00000560867 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
HMG20A-211ENST00000560867 SUPT5HO00267 1087 aaKnown RBP10.09□□□□□ -0.79
HMG20A-211ENST00000560867 ZNF697Q5TEC3 545 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 CDK15Q96Q40 435 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 CARD14Q9BXL6 1004 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 PCDHB9Q9Y5E1 797 aa10.09□□□□□ -0.79
HMG20A-211ENST00000560867 ADAMTS19Q8TE59 1207 aa10.07□□□□□ -0.8
HMG20A-211ENST00000560867 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 ESPNB1AK53 854 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 SIAH2O43255 324 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 LZTS3O60299 673 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-211ENST00000560867 PRR20EP86478 221 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 PRR20CP86479 221 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 PRR20DP86480 221 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 PRR20BP86481 221 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 PRR20AP86496 221 aa10.05□□□□□ -0.8
HMG20A-211ENST00000560867 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms