RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
CPNE6-218ENST00000560845 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
CPNE6-218ENST00000560845 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
CPNE6-218ENST00000560845 KRT27Q7Z3Y8 459 aa11.21□□□□□ -0.61
CPNE6-218ENST00000560845 C14orf93Q9H972 538 aaKnown RBP11.21□□□□□ -0.61
CPNE6-218ENST00000560845 ABCA3Q99758 1704 aa11.21□□□□□ -0.62
CPNE6-218ENST00000560845 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.62
CPNE6-218ENST00000560845 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
CPNE6-218ENST00000560845 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
CPNE6-218ENST00000560845 LRP5O75197 1615 aa11.2□□□□□ -0.62
CPNE6-218ENST00000560845 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
CPNE6-218ENST00000560845 A0A0G2JS52 829 aa11.19□□□□□ -0.62
CPNE6-218ENST00000560845 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
CPNE6-218ENST00000560845 MYT1Q01538 1121 aa11.19□□□□□ -0.62
CPNE6-218ENST00000560845 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
CPNE6-218ENST00000560845 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
CPNE6-218ENST00000560845 BAG6P46379 1132 aa11.18□□□□□ -0.62
CPNE6-218ENST00000560845 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
CPNE6-218ENST00000560845 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
CPNE6-218ENST00000560845 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
CPNE6-218ENST00000560845 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
CPNE6-218ENST00000560845 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
CPNE6-218ENST00000560845 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
CPNE6-218ENST00000560845 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
CPNE6-218ENST00000560845 PSDA5PKW4 1024 aaPredicted RBP11.16□□□□□ -0.62
CPNE6-218ENST00000560845 TESK2Q96S53 571 aa11.16□□□□□ -0.62
CPNE6-218ENST00000560845 BTG4Q9NY30 223 aa11.16□□□□□ -0.62
CPNE6-218ENST00000560845 POGKQ9P215 609 aa11.16□□□□□ -0.62
CPNE6-218ENST00000560845 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
CPNE6-218ENST00000560845 TRPM3Q9HCF6 1732 aaPredicted RBP11.15□□□□□ -0.63
CPNE6-218ENST00000560845 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
CPNE6-218ENST00000560845 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
CPNE6-218ENST00000560845 TMF1P82094 1093 aa11.14□□□□□ -0.63
CPNE6-218ENST00000560845 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
CPNE6-218ENST00000560845 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
CPNE6-218ENST00000560845 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
CPNE6-218ENST00000560845 PRR36Q9H6K5 1346 aa11.13□□□□□ -0.63
CPNE6-218ENST00000560845 CENPBP07199 599 aaPredicted RBP11.13□□□□□ -0.63
CPNE6-218ENST00000560845 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
CPNE6-218ENST00000560845 ALS2Q96Q42 1657 aa11.13□□□□□ -0.63
CPNE6-218ENST00000560845 TULP4Q9NRJ4 1543 aa11.13□□□□□ -0.63
CPNE6-218ENST00000560845 SPATA31A5Q5VU36 1347 aa11.12□□□□□ -0.63
CPNE6-218ENST00000560845 SPATA31A7Q8IWB4 1347 aa11.12□□□□□ -0.63
CPNE6-218ENST00000560845 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
CPNE6-218ENST00000560845 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
CPNE6-218ENST00000560845 FAM182BQ5T319 152 aa11.12□□□□□ -0.63
CPNE6-218ENST00000560845 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
CPNE6-218ENST00000560845 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
CPNE6-218ENST00000560845 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
CPNE6-218ENST00000560845 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
CPNE6-218ENST00000560845 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
CPNE6-218ENST00000560845 WASLO00401 505 aaPredicted RBP11.1□□□□□ -0.63
CPNE6-218ENST00000560845 R3HDM1Q15032 1099 aaKnown RBP11.1□□□□□ -0.63
CPNE6-218ENST00000560845 CDCA8Q53HL2 280 aa11.1□□□□□ -0.63
CPNE6-218ENST00000560845 NGDNQ8NEJ9 315 aaKnown RBP11.1□□□□□ -0.63
CPNE6-218ENST00000560845 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
CPNE6-218ENST00000560845 PAK3O75914 559 aaPredicted RBP11.09□□□□□ -0.63
CPNE6-218ENST00000560845 KIAA0232Q92628 1395 aa11.08□□□□□ -0.64
CPNE6-218ENST00000560845 ANP32CO43423 234 aa11.08□□□□□ -0.64
CPNE6-218ENST00000560845 TNS1Q9HBL0 1735 aaKnown RBP11.08□□□□□ -0.64
CPNE6-218ENST00000560845 SPATA31A1Q5TZJ5 1347 aa11.08□□□□□ -0.64
CPNE6-218ENST00000560845 ATP7BP35670 1465 aa11.07□□□□□ -0.64
CPNE6-218ENST00000560845 EZH2Q15910 746 aaKnown RBP11.07□□□□□ -0.64
CPNE6-218ENST00000560845 MYOM1P52179 1685 aa11.06□□□□□ -0.64
CPNE6-218ENST00000560845 TRIM37O94972 964 aa11.06□□□□□ -0.64
CPNE6-218ENST00000560845 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
CPNE6-218ENST00000560845 FAM196AQ6ZSG2 479 aa11.06□□□□□ -0.64
CPNE6-218ENST00000560845 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
CPNE6-218ENST00000560845 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
CPNE6-218ENST00000560845 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
CPNE6-218ENST00000560845 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
CPNE6-218ENST00000560845 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
CPNE6-218ENST00000560845 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
CPNE6-218ENST00000560845 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
CPNE6-218ENST00000560845 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
CPNE6-218ENST00000560845 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
CPNE6-218ENST00000560845 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
CPNE6-218ENST00000560845 APBA3O96018 575 aa11.03□□□□□ -0.64
CPNE6-218ENST00000560845 NUTM2GQ5VZR2 741 aa11.03□□□□□ -0.64
CPNE6-218ENST00000560845 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
CPNE6-218ENST00000560845 ITSN1Q15811 1721 aa11.03□□□□□ -0.64
CPNE6-218ENST00000560845 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
CPNE6-218ENST00000560845 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
CPNE6-218ENST00000560845 NRKQ7Z2Y5 1582 aa11.02□□□□□ -0.65
CPNE6-218ENST00000560845 EVA1CP58658 441 aa11.01□□□□□ -0.65
CPNE6-218ENST00000560845 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
CPNE6-218ENST00000560845 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
CPNE6-218ENST00000560845 ACEP12821 1306 aa11.01□□□□□ -0.65
CPNE6-218ENST00000560845 CPDO75976 1380 aa11.01□□□□□ -0.65
CPNE6-218ENST00000560845 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
CPNE6-218ENST00000560845 TCP11L2Q8N4U5 519 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 CDK19Q9BWU1 502 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 PANK3Q9H999 370 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 TOPAZ1Q8N9V7 1692 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 RREB1Q92766 1687 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 CAMTA1Q9Y6Y1 1673 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 USP19O94966 1318 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
CPNE6-218ENST00000560845 LMO7Q8WWI1 1683 aa10.99□□□□□ -0.65
CPNE6-218ENST00000560845 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms