RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
NEO1-211ENST00000560808 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
NEO1-211ENST00000560808 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
NEO1-211ENST00000560808 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
NEO1-211ENST00000560808 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
NEO1-211ENST00000560808 PLEKHG3A1L390 1219 aa13.86□□□□□ -0.19
NEO1-211ENST00000560808 BAG6P46379 1132 aa13.86□□□□□ -0.19
NEO1-211ENST00000560808 EVA1CP58658 441 aa13.86□□□□□ -0.19
NEO1-211ENST00000560808 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
NEO1-211ENST00000560808 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
NEO1-211ENST00000560808 ACEP12821 1306 aa13.86□□□□□ -0.19
NEO1-211ENST00000560808 RGPD8O14715 1765 aaPredicted RBP13.86□□□□□ -0.19
NEO1-211ENST00000560808 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
NEO1-211ENST00000560808 ABTB2Q8N961 1025 aa13.85□□□□□ -0.19
NEO1-211ENST00000560808 KIAA0232Q92628 1395 aa13.84□□□□□ -0.19
NEO1-211ENST00000560808 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
NEO1-211ENST00000560808 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
NEO1-211ENST00000560808 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
NEO1-211ENST00000560808 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
NEO1-211ENST00000560808 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
NEO1-211ENST00000560808 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
NEO1-211ENST00000560808 PSDA5PKW4 1024 aaPredicted RBP13.82□□□□□ -0.2
NEO1-211ENST00000560808 FAM196AQ6ZSG2 479 aa13.81□□□□□ -0.2
NEO1-211ENST00000560808 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
NEO1-211ENST00000560808 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
NEO1-211ENST00000560808 NLRP13Q86W25 1043 aa13.8□□□□□ -0.2
NEO1-211ENST00000560808 ATP7BP35670 1465 aa13.8□□□□□ -0.2
NEO1-211ENST00000560808 TRIM37O94972 964 aa13.79□□□□□ -0.2
NEO1-211ENST00000560808 GCP02774 474 aa13.79□□□□□ -0.2
NEO1-211ENST00000560808 PDE3BQ13370 1112 aa13.79□□□□□ -0.2
NEO1-211ENST00000560808 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
NEO1-211ENST00000560808 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
NEO1-211ENST00000560808 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
NEO1-211ENST00000560808 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
NEO1-211ENST00000560808 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
NEO1-211ENST00000560808 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
NEO1-211ENST00000560808 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
NEO1-211ENST00000560808 APBA3O96018 575 aa13.77□□□□□ -0.21
NEO1-211ENST00000560808 EZH2Q15910 746 aaKnown RBP13.77□□□□□ -0.21
NEO1-211ENST00000560808 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
NEO1-211ENST00000560808 TCP11L2Q8N4U5 519 aa13.77□□□□□ -0.21
NEO1-211ENST00000560808 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
NEO1-211ENST00000560808 R3HDM1Q15032 1099 aaKnown RBP13.76□□□□□ -0.21
NEO1-211ENST00000560808 BRWD3Q6RI45 1802 aa13.76□□□□□ -0.21
NEO1-211ENST00000560808 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
NEO1-211ENST00000560808 ZBTB7CA1YPR0 619 aa13.75□□□□□ -0.21
NEO1-211ENST00000560808 NLRP6P59044 892 aa13.75□□□□□ -0.21
NEO1-211ENST00000560808 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
NEO1-211ENST00000560808 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
NEO1-211ENST00000560808 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
NEO1-211ENST00000560808 USP19O94966 1318 aa13.74□□□□□ -0.21
NEO1-211ENST00000560808 NEUROD1Q13562 356 aa13.74□□□□□ -0.21
NEO1-211ENST00000560808 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
NEO1-211ENST00000560808 CPDO75976 1380 aa13.73□□□□□ -0.21
NEO1-211ENST00000560808 THRAP3Q9Y2W1 955 aaKnown RBP13.73□□□□□ -0.21
NEO1-211ENST00000560808 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
NEO1-211ENST00000560808 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
NEO1-211ENST00000560808 NRAPQ86VF7 1730 aa13.71□□□□□ -0.21
NEO1-211ENST00000560808 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.22
NEO1-211ENST00000560808 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
NEO1-211ENST00000560808 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
NEO1-211ENST00000560808 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
NEO1-211ENST00000560808 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
NEO1-211ENST00000560808 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
NEO1-211ENST00000560808 DISP2A7MBM2 1401 aa13.69□□□□□ -0.22
NEO1-211ENST00000560808 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
NEO1-211ENST00000560808 USP6P35125 1406 aa13.67□□□□□ -0.22
NEO1-211ENST00000560808 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
NEO1-211ENST00000560808 AXIN2Q9Y2T1 843 aa13.67□□□□□ -0.22
NEO1-211ENST00000560808 TTC21BQ7Z4L5 1316 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 SOX12O15370 315 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 DDB1Q16531 1140 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 ROCK2O75116 1388 aaKnown RBP13.66□□□□□ -0.22
NEO1-211ENST00000560808 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
NEO1-211ENST00000560808 ITSN1Q15811 1721 aa13.65□□□□□ -0.22
NEO1-211ENST00000560808 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
NEO1-211ENST00000560808 CRB1P82279 1406 aa13.64□□□□□ -0.23
NEO1-211ENST00000560808 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
NEO1-211ENST00000560808 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
NEO1-211ENST00000560808 COL5A2P05997 1499 aaPredicted RBP13.64□□□□□ -0.23
NEO1-211ENST00000560808 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
NEO1-211ENST00000560808 WDR17Q8IZU2 1322 aa13.63□□□□□ -0.23
NEO1-211ENST00000560808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
NEO1-211ENST00000560808 CDCA7Q9BWT1 371 aaPredicted RBP13.62□□□□□ -0.23
NEO1-211ENST00000560808 TOPAZ1Q8N9V7 1692 aa13.62□□□□□ -0.23
NEO1-211ENST00000560808 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
NEO1-211ENST00000560808 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
NEO1-211ENST00000560808 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
NEO1-211ENST00000560808 EXOC5O00471 708 aa13.61□□□□□ -0.23
NEO1-211ENST00000560808 PLSCR1O15162 318 aa13.61□□□□□ -0.23
NEO1-211ENST00000560808 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
NEO1-211ENST00000560808 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
NEO1-211ENST00000560808 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
NEO1-211ENST00000560808 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
NEO1-211ENST00000560808 RGPD1P0DJD0 1748 aa13.6□□□□□ -0.23
NEO1-211ENST00000560808 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
NEO1-211ENST00000560808 CARD11Q9BXL7 1154 aa13.6□□□□□ -0.23
NEO1-211ENST00000560808 KTN1Q86UP2 1357 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms