RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-204ENST00000560655 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
PCAT29-204ENST00000560655 ADAMTS8Q9UP79 889 aa8.09□□□□□ -1.11
PCAT29-204ENST00000560655 KDM5AP29375 1690 aaKnown RBP8.08□□□□□ -1.12
PCAT29-204ENST00000560655 TMEM131LA2VDJ0 1609 aa8.08□□□□□ -1.12
PCAT29-204ENST00000560655 PLEKHG5O94827 1062 aa8.08□□□□□ -1.12
PCAT29-204ENST00000560655 SLC12A5Q9H2X9 1139 aa8.08□□□□□ -1.12
PCAT29-204ENST00000560655 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
PCAT29-204ENST00000560655 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
PCAT29-204ENST00000560655 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
PCAT29-204ENST00000560655 SALL2Q9Y467 1007 aaPredicted RBP8.05□□□□□ -1.12
PCAT29-204ENST00000560655 ZNF521Q96K83 1311 aa8.04□□□□□ -1.12
PCAT29-204ENST00000560655 TULP4Q9NRJ4 1543 aa8.04□□□□□ -1.12
PCAT29-204ENST00000560655 KIF13AQ9H1H9 1805 aa8.04□□□□□ -1.12
PCAT29-204ENST00000560655 SPATA31D1Q6ZQQ2 1576 aa8.04□□□□□ -1.12
PCAT29-204ENST00000560655 QRICH2Q9H0J4 1663 aa8.04□□□□□ -1.12
PCAT29-204ENST00000560655 EVC2Q86UK5 1308 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
PCAT29-204ENST00000560655 MYO5BQ9ULV0 1848 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 A2ML1A8K2U0 1454 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 POLR3AO14802 1390 aaPredicted RBP8.03□□□□□ -1.12
PCAT29-204ENST00000560655 PLEKHH1Q9ULM0 1364 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 RCAN3Q9UKA8 241 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 ERBB3P21860 1342 aa8.03□□□□□ -1.12
PCAT29-204ENST00000560655 PTPRMP28827 1452 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 ZMYM3Q14202 1370 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 RRP1P56182 461 aaKnown RBP8.02□□□□□ -1.13
PCAT29-204ENST00000560655 MLECQ14165 292 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 WDR43Q15061 677 aaKnown RBP eCLIP8.02□□□□□ -1.13
PCAT29-204ENST00000560655 TRMT2AQ8IZ69 625 aaKnown RBP8.02□□□□□ -1.13
PCAT29-204ENST00000560655 CABP2Q9NPB3 220 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 STK26Q9P289 416 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 ALKQ9UM73 1620 aa8.02□□□□□ -1.13
PCAT29-204ENST00000560655 YTHDC2Q9H6S0 1430 aaKnown RBP8.02□□□□□ -1.13
PCAT29-204ENST00000560655 CLTCQ00610 1675 aaKnown RBP8.02□□□□□ -1.13
PCAT29-204ENST00000560655 ANKRD36BQ8N2N9 1353 aa8.01□□□□□ -1.13
PCAT29-204ENST00000560655 MORC1Q86VD1 984 aa8.01□□□□□ -1.13
PCAT29-204ENST00000560655 ARHGEF40Q8TER5 1519 aa8.01□□□□□ -1.13
PCAT29-204ENST00000560655 RIMS2Q9UQ26 1411 aa8.01□□□□□ -1.13
PCAT29-204ENST00000560655 SLFN5Q08AF3 891 aa8□□□□□ -1.13
PCAT29-204ENST00000560655 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
PCAT29-204ENST00000560655 PRAM1Q96QH2 718 aa8□□□□□ -1.13
PCAT29-204ENST00000560655 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
PCAT29-204ENST00000560655 USP32Q8NFA0 1604 aa8□□□□□ -1.13
PCAT29-204ENST00000560655 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
PCAT29-204ENST00000560655 SAFB2Q14151 953 aaKnown RBP eCLIP7.99□□□□□ -1.13
PCAT29-204ENST00000560655 L3MBTL3Q96JM7 780 aaPredicted RBP7.99□□□□□ -1.13
PCAT29-204ENST00000560655 CD163L1Q9NR16 1453 aa7.99□□□□□ -1.13
PCAT29-204ENST00000560655 CGNL1Q0VF96 1302 aa7.99□□□□□ -1.13
PCAT29-204ENST00000560655 DLC1Q96QB1 1528 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 NSD2O96028 1365 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 NINLQ9Y2I6 1382 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 APAF1O14727 1248 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 GOLGA2Q08379 1002 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 CCDC146Q8IYE0 955 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 EXOC6Q8TAG9 804 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 SIRT1Q96EB6 747 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 CDK19Q9BWU1 502 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 POGKQ9P215 609 aa7.98□□□□□ -1.13
PCAT29-204ENST00000560655 MINK1Q8N4C8 1332 aaPredicted RBP7.98□□□□□ -1.13
PCAT29-204ENST00000560655 A0A1W2PP64 1363 aa7.97□□□□□ -1.13
PCAT29-204ENST00000560655 ATAD2Q6PL18 1390 aa7.97□□□□□ -1.13
PCAT29-204ENST00000560655 MTHFSP49914 203 aa7.97□□□□□ -1.13
PCAT29-204ENST00000560655 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
PCAT29-204ENST00000560655 WAPLQ7Z5K2 1190 aa7.97□□□□□ -1.13
PCAT29-204ENST00000560655 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.97□□□□□ -1.13
PCAT29-204ENST00000560655 SETD1AO15047 1707 aaKnown RBP7.97□□□□□ -1.13
PCAT29-204ENST00000560655 FYB1O15117 783 aa7.96□□□□□ -1.14
PCAT29-204ENST00000560655 ZNF710Q8N1W2 664 aa7.96□□□□□ -1.14
PCAT29-204ENST00000560655 METP08581 1390 aa7.96□□□□□ -1.14
PCAT29-204ENST00000560655 TNRQ92752 1358 aa7.96□□□□□ -1.14
PCAT29-204ENST00000560655 NRXN3Q9Y4C0 1643 aa7.96□□□□□ -1.14
PCAT29-204ENST00000560655 NLRP1Q9C000 1473 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 PLIN1O60240 522 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 TNNT2P45379 298 aaPredicted RBP7.95□□□□□ -1.14
PCAT29-204ENST00000560655 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 TERF2IPQ9NYB0 399 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 CABP1Q9NZU7 370 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 SHPRHQ149N8 1683 aa7.95□□□□□ -1.14
PCAT29-204ENST00000560655 MED14O60244 1454 aa7.94□□□□□ -1.14
PCAT29-204ENST00000560655 HDGFP51858 240 aaKnown RBP7.94□□□□□ -1.14
PCAT29-204ENST00000560655 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
PCAT29-204ENST00000560655 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
PCAT29-204ENST00000560655 ESF1Q9H501 851 aaKnown RBP7.94□□□□□ -1.14
PCAT29-204ENST00000560655 TMEM2Q9UHN6 1383 aa7.94□□□□□ -1.14
PCAT29-204ENST00000560655 TECPR2O15040 1411 aa7.94□□□□□ -1.14
PCAT29-204ENST00000560655 E9PSI1 815 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
PCAT29-204ENST00000560655 HOXB1P14653 301 aaPredicted RBP7.93□□□□□ -1.14
PCAT29-204ENST00000560655 CCDC27Q2M243 656 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 C20orf194Q5TEA3 1177 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 CRBNQ96SW2 442 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 PLA2G2EQ9NZK7 142 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 FAM135BQ49AJ0 1406 aa7.93□□□□□ -1.14
PCAT29-204ENST00000560655 LTKP29376 864 aa7.92□□□□□ -1.14
PCAT29-204ENST00000560655 CEBPAP49715 358 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms