RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
MARK3-221ENST00000560603 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
MARK3-221ENST00000560603 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
MARK3-221ENST00000560603 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
MARK3-221ENST00000560603 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
MARK3-221ENST00000560603 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
MARK3-221ENST00000560603 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
MARK3-221ENST00000560603 LRP5O75197 1615 aa17.67■□□□□ 0.42
MARK3-221ENST00000560603 PRR36Q9H6K5 1346 aa17.67■□□□□ 0.42
MARK3-221ENST00000560603 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
MARK3-221ENST00000560603 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
MARK3-221ENST00000560603 HRCP23327 699 aa17.65■□□□□ 0.42
MARK3-221ENST00000560603 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
MARK3-221ENST00000560603 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
MARK3-221ENST00000560603 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
MARK3-221ENST00000560603 FAM182BQ5T319 152 aa17.61■□□□□ 0.41
MARK3-221ENST00000560603 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
MARK3-221ENST00000560603 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
MARK3-221ENST00000560603 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
MARK3-221ENST00000560603 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
MARK3-221ENST00000560603 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
MARK3-221ENST00000560603 ATP7BP35670 1465 aa17.6■□□□□ 0.41
MARK3-221ENST00000560603 THSD7AQ9UPZ6 1657 aa17.59■□□□□ 0.41
MARK3-221ENST00000560603 EVA1CP58658 441 aa17.59■□□□□ 0.41
MARK3-221ENST00000560603 R3HDM1Q15032 1099 aaKnown RBP17.59■□□□□ 0.41
MARK3-221ENST00000560603 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
MARK3-221ENST00000560603 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
MARK3-221ENST00000560603 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
MARK3-221ENST00000560603 CRYBG1Q9Y4K1 1723 aa17.58■□□□□ 0.4
MARK3-221ENST00000560603 CDK19Q9BWU1 502 aa17.57■□□□□ 0.4
MARK3-221ENST00000560603 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
MARK3-221ENST00000560603 TRIM37O94972 964 aa17.56■□□□□ 0.4
MARK3-221ENST00000560603 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
MARK3-221ENST00000560603 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
MARK3-221ENST00000560603 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
MARK3-221ENST00000560603 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
MARK3-221ENST00000560603 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
MARK3-221ENST00000560603 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
MARK3-221ENST00000560603 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
MARK3-221ENST00000560603 ACEP12821 1306 aa17.54■□□□□ 0.4
MARK3-221ENST00000560603 APBA3O96018 575 aa17.54■□□□□ 0.4
MARK3-221ENST00000560603 BARGINQ6ZT62 677 aa17.54■□□□□ 0.4
MARK3-221ENST00000560603 CAMKK2Q96RR4 588 aa17.54■□□□□ 0.4
MARK3-221ENST00000560603 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
MARK3-221ENST00000560603 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
MARK3-221ENST00000560603 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
MARK3-221ENST00000560603 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
MARK3-221ENST00000560603 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
MARK3-221ENST00000560603 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
MARK3-221ENST00000560603 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
MARK3-221ENST00000560603 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
MARK3-221ENST00000560603 C11orf95C9JLR9 678 aaPredicted RBP17.5■□□□□ 0.39
MARK3-221ENST00000560603 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
MARK3-221ENST00000560603 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
MARK3-221ENST00000560603 CPDO75976 1380 aa17.5■□□□□ 0.39
MARK3-221ENST00000560603 LARP1Q6PKG0 1096 aaKnown RBP17.49■□□□□ 0.39
MARK3-221ENST00000560603 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
MARK3-221ENST00000560603 USP19O94966 1318 aa17.47■□□□□ 0.39
MARK3-221ENST00000560603 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
MARK3-221ENST00000560603 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
MARK3-221ENST00000560603 KIAA1210Q9ULL0 1709 aa17.47■□□□□ 0.39
MARK3-221ENST00000560603 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
MARK3-221ENST00000560603 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
MARK3-221ENST00000560603 GCP02774 474 aa17.46■□□□□ 0.39
MARK3-221ENST00000560603 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
MARK3-221ENST00000560603 CENPJQ9HC77 1338 aaPredicted RBP17.44■□□□□ 0.38
MARK3-221ENST00000560603 LMO7Q8WWI1 1683 aa17.42■□□□□ 0.38
MARK3-221ENST00000560603 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
MARK3-221ENST00000560603 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
MARK3-221ENST00000560603 NLRP6P59044 892 aa17.41■□□□□ 0.38
MARK3-221ENST00000560603 PPP1R1BQ9UD71 204 aaPredicted RBP17.41■□□□□ 0.38
MARK3-221ENST00000560603 COL5A2P05997 1499 aaPredicted RBP17.41■□□□□ 0.38
MARK3-221ENST00000560603 RREB1Q92766 1687 aa17.41■□□□□ 0.38
MARK3-221ENST00000560603 CRB1P82279 1406 aa17.4■□□□□ 0.38
MARK3-221ENST00000560603 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
MARK3-221ENST00000560603 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
MARK3-221ENST00000560603 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
MARK3-221ENST00000560603 OVOS2A0A0G2JMS6 1433 aa17.39■□□□□ 0.38
MARK3-221ENST00000560603 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.38
MARK3-221ENST00000560603 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.38
MARK3-221ENST00000560603 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
MARK3-221ENST00000560603 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
MARK3-221ENST00000560603 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
MARK3-221ENST00000560603 DDB1Q16531 1140 aa17.38■□□□□ 0.37
MARK3-221ENST00000560603 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
MARK3-221ENST00000560603 KCNQ2O43526 872 aa17.37■□□□□ 0.37
MARK3-221ENST00000560603 TOM1L2Q6ZVM7 507 aa17.37■□□□□ 0.37
MARK3-221ENST00000560603 USP6P35125 1406 aa17.37■□□□□ 0.37
MARK3-221ENST00000560603 PLSCR1O15162 318 aa17.36■□□□□ 0.37
MARK3-221ENST00000560603 YY1P25490 414 aa17.35■□□□□ 0.37
MARK3-221ENST00000560603 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
MARK3-221ENST00000560603 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
MARK3-221ENST00000560603 SLIT3O75094 1523 aa17.33■□□□□ 0.37
MARK3-221ENST00000560603 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
MARK3-221ENST00000560603 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
MARK3-221ENST00000560603 KCNH5Q8NCM2 988 aa17.33■□□□□ 0.36
MARK3-221ENST00000560603 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
MARK3-221ENST00000560603 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
MARK3-221ENST00000560603 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
MARK3-221ENST00000560603 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms