RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 ALS2Q96Q42 1657 aa23.95■■□□□ 1.43
HMG20A-210ENST00000560498 CENPJQ9HC77 1338 aaPredicted RBP23.95■■□□□ 1.42
HMG20A-210ENST00000560498 VPS72Q15906 364 aa23.95■■□□□ 1.42
HMG20A-210ENST00000560498 GLI3P10071 1580 aa23.95■■□□□ 1.42
HMG20A-210ENST00000560498 ACEP12821 1306 aa23.94■■□□□ 1.42
HMG20A-210ENST00000560498 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
HMG20A-210ENST00000560498 NBPF8Q3BBV2 869 aa23.93■■□□□ 1.42
HMG20A-210ENST00000560498 CABP2Q9NPB3 220 aa23.92■■□□□ 1.42
HMG20A-210ENST00000560498 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
HMG20A-210ENST00000560498 SRPK2P78362 688 aaKnown RBP23.91■■□□□ 1.42
HMG20A-210ENST00000560498 CCDC9Q9Y3X0 531 aaKnown RBP23.91■■□□□ 1.42
HMG20A-210ENST00000560498 BRWD3Q6RI45 1802 aa23.91■■□□□ 1.42
HMG20A-210ENST00000560498 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
HMG20A-210ENST00000560498 PLCH1Q4KWH8 1693 aa23.9■■□□□ 1.42
HMG20A-210ENST00000560498 NUTM2GQ5VZR2 741 aa23.9■■□□□ 1.42
HMG20A-210ENST00000560498 BTG4Q9NY30 223 aa23.9■■□□□ 1.42
HMG20A-210ENST00000560498 SF3B2Q13435 895 aaKnown RBP23.88■■□□□ 1.41
HMG20A-210ENST00000560498 SEPT12Q8IYM1 358 aa23.88■■□□□ 1.41
HMG20A-210ENST00000560498 TOPAZ1Q8N9V7 1692 aa23.87■■□□□ 1.41
HMG20A-210ENST00000560498 PSDA5PKW4 1024 aaPredicted RBP23.87■■□□□ 1.41
HMG20A-210ENST00000560498 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
HMG20A-210ENST00000560498 ONECUT3O60422 494 aaPredicted RBP23.86■■□□□ 1.41
HMG20A-210ENST00000560498 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
HMG20A-210ENST00000560498 TRPM1Q7Z4N2 1603 aa23.84■■□□□ 1.41
HMG20A-210ENST00000560498 CRYBG1Q9Y4K1 1723 aa23.84■■□□□ 1.41
HMG20A-210ENST00000560498 ROCK2O75116 1388 aaKnown RBP23.84■■□□□ 1.41
HMG20A-210ENST00000560498 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
HMG20A-210ENST00000560498 CABP1Q9NZU7 370 aa23.83■■□□□ 1.41
HMG20A-210ENST00000560498 QRICH2Q9H0J4 1663 aa23.83■■□□□ 1.4
HMG20A-210ENST00000560498 KIAA0232Q92628 1395 aa23.82■■□□□ 1.4
HMG20A-210ENST00000560498 ZC3H6P61129 1189 aaKnown RBP23.82■■□□□ 1.4
HMG20A-210ENST00000560498 CHRNA2Q15822 529 aa23.82■■□□□ 1.4
HMG20A-210ENST00000560498 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
HMG20A-210ENST00000560498 COL14A1Q05707 1796 aaKnown RBP23.82■■□□□ 1.4
HMG20A-210ENST00000560498 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
HMG20A-210ENST00000560498 FAM98CQ17RN3 349 aaKnown RBP23.8■■□□□ 1.4
HMG20A-210ENST00000560498 EVC2Q86UK5 1308 aa23.79■■□□□ 1.4
HMG20A-210ENST00000560498 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
HMG20A-210ENST00000560498 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
HMG20A-210ENST00000560498 A0A0G2JS52 829 aa23.77■■□□□ 1.4
HMG20A-210ENST00000560498 MYT1Q01538 1121 aa23.77■■□□□ 1.4
HMG20A-210ENST00000560498 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
HMG20A-210ENST00000560498 KRT27Q7Z3Y8 459 aa23.77■■□□□ 1.4
HMG20A-210ENST00000560498 PHRF1Q9P1Y6 1649 aaKnown RBP23.76■■□□□ 1.39
HMG20A-210ENST00000560498 USP19O94966 1318 aa23.75■■□□□ 1.39
HMG20A-210ENST00000560498 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
HMG20A-210ENST00000560498 STRN4Q9NRL3 753 aa23.74■■□□□ 1.39
HMG20A-210ENST00000560498 USP6P35125 1406 aa23.73■■□□□ 1.39
HMG20A-210ENST00000560498 GCP02774 474 aa23.72■■□□□ 1.39
HMG20A-210ENST00000560498 TONSLQ96HA7 1378 aa23.71■■□□□ 1.39
HMG20A-210ENST00000560498 SPATA31A1Q5TZJ5 1347 aa23.71■■□□□ 1.39
HMG20A-210ENST00000560498 BAG6P46379 1132 aa23.71■■□□□ 1.39
HMG20A-210ENST00000560498 CARD11Q9BXL7 1154 aa23.71■■□□□ 1.39
HMG20A-210ENST00000560498 NRKQ7Z2Y5 1582 aa23.7■■□□□ 1.38
HMG20A-210ENST00000560498 BRD4O60885 1362 aaPredicted RBP23.7■■□□□ 1.38
HMG20A-210ENST00000560498 NLRP6P59044 892 aa23.7■■□□□ 1.38
HMG20A-210ENST00000560498 SSH2Q76I76 1423 aa23.69■■□□□ 1.38
HMG20A-210ENST00000560498 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
HMG20A-210ENST00000560498 CPDO75976 1380 aa23.68■■□□□ 1.38
HMG20A-210ENST00000560498 EVA1CP58658 441 aa23.68■■□□□ 1.38
HMG20A-210ENST00000560498 CAMTA1Q9Y6Y1 1673 aa23.67■■□□□ 1.38
HMG20A-210ENST00000560498 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
HMG20A-210ENST00000560498 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
HMG20A-210ENST00000560498 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
HMG20A-210ENST00000560498 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
HMG20A-210ENST00000560498 TTC21BQ7Z4L5 1316 aa23.64■■□□□ 1.38
HMG20A-210ENST00000560498 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.37
HMG20A-210ENST00000560498 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.37
HMG20A-210ENST00000560498 YY1P25490 414 aa23.63■■□□□ 1.37
HMG20A-210ENST00000560498 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
HMG20A-210ENST00000560498 SBNO2Q9Y2G9 1366 aa23.62■■□□□ 1.37
HMG20A-210ENST00000560498 LMO7Q8WWI1 1683 aa23.61■■□□□ 1.37
HMG20A-210ENST00000560498 CPSF1Q10570 1443 aaKnown RBP23.61■■□□□ 1.37
HMG20A-210ENST00000560498 SLIT3O75094 1523 aa23.6■■□□□ 1.37
HMG20A-210ENST00000560498 BARGINQ6ZT62 677 aa23.6■■□□□ 1.37
HMG20A-210ENST00000560498 PIK3C2AO00443 1686 aa23.59■■□□□ 1.37
HMG20A-210ENST00000560498 KTN1Q86UP2 1357 aaKnown RBP23.58■■□□□ 1.37
HMG20A-210ENST00000560498 TCP11L2Q8N4U5 519 aa23.58■■□□□ 1.37
HMG20A-210ENST00000560498 AATKQ6ZMQ8 1374 aa23.57■■□□□ 1.36
HMG20A-210ENST00000560498 TTC21AQ8NDW8 1320 aa23.57■■□□□ 1.36
HMG20A-210ENST00000560498 COL5A2P05997 1499 aaPredicted RBP23.56■■□□□ 1.36
HMG20A-210ENST00000560498 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
HMG20A-210ENST00000560498 AKAP12Q02952 1782 aa23.56■■□□□ 1.36
HMG20A-210ENST00000560498 SOX12O15370 315 aa23.56■■□□□ 1.36
HMG20A-210ENST00000560498 TMC1Q8TDI8 760 aa23.56■■□□□ 1.36
HMG20A-210ENST00000560498 AXIN2Q9Y2T1 843 aa23.56■■□□□ 1.36
HMG20A-210ENST00000560498 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
HMG20A-210ENST00000560498 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
HMG20A-210ENST00000560498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.54■■□□□ 1.36
HMG20A-210ENST00000560498 CD163L1Q9NR16 1453 aa23.54■■□□□ 1.36
HMG20A-210ENST00000560498 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
HMG20A-210ENST00000560498 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.36
HMG20A-210ENST00000560498 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
HMG20A-210ENST00000560498 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
HMG20A-210ENST00000560498 KCNH5Q8NCM2 988 aa23.52■■□□□ 1.36
HMG20A-210ENST00000560498 TESK2Q96S53 571 aa23.52■■□□□ 1.36
HMG20A-210ENST00000560498 TRIM37O94972 964 aa23.51■■□□□ 1.35
HMG20A-210ENST00000560498 EZH2Q15910 746 aaKnown RBP23.51■■□□□ 1.35
HMG20A-210ENST00000560498 CRB1P82279 1406 aa23.5■■□□□ 1.35
HMG20A-210ENST00000560498 COL18A1P39060 1754 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms