RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-216ENST00000560243 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
RABGGTA-216ENST00000560243 ATRNO75882 1429 aa16.58■□□□□ 0.24
RABGGTA-216ENST00000560243 SLIT2O94813 1529 aa16.57■□□□□ 0.24
RABGGTA-216ENST00000560243 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
RABGGTA-216ENST00000560243 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
RABGGTA-216ENST00000560243 RGS12O14924 1447 aa16.56■□□□□ 0.24
RABGGTA-216ENST00000560243 TRPC5Q9UL62 973 aaPredicted RBP16.56■□□□□ 0.24
RABGGTA-216ENST00000560243 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
RABGGTA-216ENST00000560243 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-216ENST00000560243 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
RABGGTA-216ENST00000560243 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-216ENST00000560243 SBNO2Q9Y2G9 1366 aa16.53■□□□□ 0.24
RABGGTA-216ENST00000560243 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
RABGGTA-216ENST00000560243 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-216ENST00000560243 USP6P35125 1406 aa16.52■□□□□ 0.23
RABGGTA-216ENST00000560243 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
RABGGTA-216ENST00000560243 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
RABGGTA-216ENST00000560243 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
RABGGTA-216ENST00000560243 GLI3P10071 1580 aa16.51■□□□□ 0.23
RABGGTA-216ENST00000560243 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
RABGGTA-216ENST00000560243 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-216ENST00000560243 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 NRAPQ86VF7 1730 aa16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 TESK2Q96S53 571 aa16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
RABGGTA-216ENST00000560243 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-216ENST00000560243 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
RABGGTA-216ENST00000560243 KIAA0232Q92628 1395 aa16.48■□□□□ 0.23
RABGGTA-216ENST00000560243 USP19O94966 1318 aa16.47■□□□□ 0.23
RABGGTA-216ENST00000560243 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
RABGGTA-216ENST00000560243 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
RABGGTA-216ENST00000560243 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
RABGGTA-216ENST00000560243 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
RABGGTA-216ENST00000560243 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-216ENST00000560243 VPS72Q15906 364 aa16.46■□□□□ 0.23
RABGGTA-216ENST00000560243 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.23
RABGGTA-216ENST00000560243 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
RABGGTA-216ENST00000560243 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
RABGGTA-216ENST00000560243 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
RABGGTA-216ENST00000560243 USP47Q96K76 1375 aa16.45■□□□□ 0.22
RABGGTA-216ENST00000560243 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
RABGGTA-216ENST00000560243 EP400Q96L91 3159 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 NLRP6P59044 892 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 TTC21BQ7Z4L5 1316 aa16.44■□□□□ 0.22
RABGGTA-216ENST00000560243 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-216ENST00000560243 GCP02774 474 aa16.43■□□□□ 0.22
RABGGTA-216ENST00000560243 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-216ENST00000560243 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
RABGGTA-216ENST00000560243 SLIT3O75094 1523 aa16.41■□□□□ 0.22
RABGGTA-216ENST00000560243 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
RABGGTA-216ENST00000560243 CPDO75976 1380 aa16.4■□□□□ 0.22
RABGGTA-216ENST00000560243 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
RABGGTA-216ENST00000560243 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
RABGGTA-216ENST00000560243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 SEPT12Q8IYM1 358 aa16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
RABGGTA-216ENST00000560243 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
RABGGTA-216ENST00000560243 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-216ENST00000560243 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-216ENST00000560243 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
RABGGTA-216ENST00000560243 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
RABGGTA-216ENST00000560243 SOX12O15370 315 aa16.37■□□□□ 0.21
RABGGTA-216ENST00000560243 NME9Q86XW9 330 aa16.37■□□□□ 0.21
RABGGTA-216ENST00000560243 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-216ENST00000560243 TMF1P82094 1093 aa16.35■□□□□ 0.21
RABGGTA-216ENST00000560243 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
RABGGTA-216ENST00000560243 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
RABGGTA-216ENST00000560243 COL18A1P39060 1754 aa16.35■□□□□ 0.21
RABGGTA-216ENST00000560243 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-216ENST00000560243 A0A0G2JS52 829 aa16.34■□□□□ 0.21
RABGGTA-216ENST00000560243 EVA1CP58658 441 aa16.34■□□□□ 0.21
RABGGTA-216ENST00000560243 MYT1Q01538 1121 aa16.34■□□□□ 0.21
RABGGTA-216ENST00000560243 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-216ENST00000560243 NFAT5O94916 1531 aa16.34■□□□□ 0.21
RABGGTA-216ENST00000560243 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.2
RABGGTA-216ENST00000560243 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
RABGGTA-216ENST00000560243 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
RABGGTA-216ENST00000560243 RGPD5Q99666 1765 aa16.32■□□□□ 0.2
RABGGTA-216ENST00000560243 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
RABGGTA-216ENST00000560243 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
RABGGTA-216ENST00000560243 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
RABGGTA-216ENST00000560243 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
RABGGTA-216ENST00000560243 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
RABGGTA-216ENST00000560243 FAM182BQ5T319 152 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms