RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
AC104041.1-202ENST00000560097 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
AC104041.1-202ENST00000560097 ACEP12821 1306 aa16.89■□□□□ 0.29
AC104041.1-202ENST00000560097 PLEKHG3A1L390 1219 aa16.88■□□□□ 0.29
AC104041.1-202ENST00000560097 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
AC104041.1-202ENST00000560097 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
AC104041.1-202ENST00000560097 UNC5CLQ8IV45 518 aa16.87■□□□□ 0.29
AC104041.1-202ENST00000560097 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
AC104041.1-202ENST00000560097 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
AC104041.1-202ENST00000560097 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
AC104041.1-202ENST00000560097 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
AC104041.1-202ENST00000560097 AKAP12Q02952 1782 aa16.86■□□□□ 0.29
AC104041.1-202ENST00000560097 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
AC104041.1-202ENST00000560097 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
AC104041.1-202ENST00000560097 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
AC104041.1-202ENST00000560097 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
AC104041.1-202ENST00000560097 NUTM2GQ5VZR2 741 aa16.84■□□□□ 0.29
AC104041.1-202ENST00000560097 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
AC104041.1-202ENST00000560097 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
AC104041.1-202ENST00000560097 THSD7AQ9UPZ6 1657 aa16.82■□□□□ 0.28
AC104041.1-202ENST00000560097 USP19O94966 1318 aa16.82■□□□□ 0.28
AC104041.1-202ENST00000560097 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
AC104041.1-202ENST00000560097 USP6P35125 1406 aa16.81■□□□□ 0.28
AC104041.1-202ENST00000560097 VPS72Q15906 364 aa16.81■□□□□ 0.28
AC104041.1-202ENST00000560097 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
AC104041.1-202ENST00000560097 CAMTA1Q9Y6Y1 1673 aa16.8■□□□□ 0.28
AC104041.1-202ENST00000560097 SLIT3O75094 1523 aa16.8■□□□□ 0.28
AC104041.1-202ENST00000560097 COL18A1P39060 1754 aa16.79■□□□□ 0.28
AC104041.1-202ENST00000560097 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
AC104041.1-202ENST00000560097 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
AC104041.1-202ENST00000560097 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
AC104041.1-202ENST00000560097 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
AC104041.1-202ENST00000560097 CHRNA2Q15822 529 aa16.78■□□□□ 0.28
AC104041.1-202ENST00000560097 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
AC104041.1-202ENST00000560097 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
AC104041.1-202ENST00000560097 BTG4Q9NY30 223 aa16.77■□□□□ 0.28
AC104041.1-202ENST00000560097 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
AC104041.1-202ENST00000560097 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
AC104041.1-202ENST00000560097 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
AC104041.1-202ENST00000560097 TESK2Q96S53 571 aa16.73■□□□□ 0.27
AC104041.1-202ENST00000560097 NFAT5O94916 1531 aa16.73■□□□□ 0.27
AC104041.1-202ENST00000560097 RGPD5Q99666 1765 aa16.73■□□□□ 0.27
AC104041.1-202ENST00000560097 CPDO75976 1380 aa16.73■□□□□ 0.27
AC104041.1-202ENST00000560097 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
AC104041.1-202ENST00000560097 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
AC104041.1-202ENST00000560097 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
AC104041.1-202ENST00000560097 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.27
AC104041.1-202ENST00000560097 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
AC104041.1-202ENST00000560097 ABTB2Q8N961 1025 aa16.7■□□□□ 0.26
AC104041.1-202ENST00000560097 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
AC104041.1-202ENST00000560097 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
AC104041.1-202ENST00000560097 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
AC104041.1-202ENST00000560097 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
AC104041.1-202ENST00000560097 GCP02774 474 aa16.69■□□□□ 0.26
AC104041.1-202ENST00000560097 FAM182BQ5T319 152 aa16.69■□□□□ 0.26
AC104041.1-202ENST00000560097 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
AC104041.1-202ENST00000560097 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
AC104041.1-202ENST00000560097 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
AC104041.1-202ENST00000560097 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
AC104041.1-202ENST00000560097 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
AC104041.1-202ENST00000560097 ADRA2BP18089 450 aa16.65■□□□□ 0.26
AC104041.1-202ENST00000560097 DEFB132Q7Z7B7 95 aa16.65■□□□□ 0.26
AC104041.1-202ENST00000560097 SLC12A5Q9H2X9 1139 aa16.65■□□□□ 0.26
AC104041.1-202ENST00000560097 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
AC104041.1-202ENST00000560097 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 KRT27Q7Z3Y8 459 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 STRN4Q9NRL3 753 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 MYOM1P52179 1685 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 PARP4Q9UKK3 1724 aaKnown RBP16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 A0A1W2PP64 1363 aa16.64■□□□□ 0.25
AC104041.1-202ENST00000560097 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
AC104041.1-202ENST00000560097 NLRP6P59044 892 aa16.63■□□□□ 0.25
AC104041.1-202ENST00000560097 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
AC104041.1-202ENST00000560097 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
AC104041.1-202ENST00000560097 NME9Q86XW9 330 aa16.62■□□□□ 0.25
AC104041.1-202ENST00000560097 AATKQ6ZMQ8 1374 aa16.62■□□□□ 0.25
AC104041.1-202ENST00000560097 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
AC104041.1-202ENST00000560097 LTN1O94822 1766 aa16.61■□□□□ 0.25
AC104041.1-202ENST00000560097 OVOS2A0A0J9YW53 1432 aa16.61■□□□□ 0.25
AC104041.1-202ENST00000560097 OVOS2Q6IE36 1432 aa16.61■□□□□ 0.25
AC104041.1-202ENST00000560097 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
AC104041.1-202ENST00000560097 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
AC104041.1-202ENST00000560097 USP47Q96K76 1375 aa16.6■□□□□ 0.25
AC104041.1-202ENST00000560097 TTC21AQ8NDW8 1320 aa16.59■□□□□ 0.25
AC104041.1-202ENST00000560097 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
AC104041.1-202ENST00000560097 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
AC104041.1-202ENST00000560097 EDC4Q6P2E9 1401 aaKnown RBP16.58■□□□□ 0.24
AC104041.1-202ENST00000560097 SBF2Q86WG5 1849 aa16.57■□□□□ 0.24
AC104041.1-202ENST00000560097 CRB1P82279 1406 aa16.57■□□□□ 0.24
AC104041.1-202ENST00000560097 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
AC104041.1-202ENST00000560097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.24
AC104041.1-202ENST00000560097 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms