RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 DLC1Q96QB1 1528 aa30.08■■■□□ 2.41
PSEN1-225ENST00000560005 GPRASP1Q5JY77 1395 aa30.07■■■□□ 2.4
PSEN1-225ENST00000560005 DISP2A7MBM2 1401 aa30.06■■■□□ 2.4
PSEN1-225ENST00000560005 HIRIP3Q9BW71 556 aaPredicted RBP30.06■■■□□ 2.4
PSEN1-225ENST00000560005 TNS1Q9HBL0 1735 aaKnown RBP30.05■■■□□ 2.4
PSEN1-225ENST00000560005 THSD7AQ9UPZ6 1657 aa30.05■■■□□ 2.4
PSEN1-225ENST00000560005 ACIN1Q9UKV3 1341 aaKnown RBP30.05■■■□□ 2.4
PSEN1-225ENST00000560005 EZH2Q15910 746 aaKnown RBP30.03■■■□□ 2.4
PSEN1-225ENST00000560005 PRR36Q9H6K5 1346 aa30.02■■■□□ 2.4
PSEN1-225ENST00000560005 PRDM11Q9NQV5 511 aa30.01■■■□□ 2.39
PSEN1-225ENST00000560005 MINK1Q8N4C8 1332 aaPredicted RBP30■■■□□ 2.39
PSEN1-225ENST00000560005 CRYBG1Q9Y4K1 1723 aa30■■■□□ 2.39
PSEN1-225ENST00000560005 TRAK1Q9UPV9 953 aa30■■■□□ 2.39
PSEN1-225ENST00000560005 EIF3AQ14152 1382 aaKnown RBP29.99■■■□□ 2.39
PSEN1-225ENST00000560005 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
PSEN1-225ENST00000560005 TULP4Q9NRJ4 1543 aa29.98■■■□□ 2.39
PSEN1-225ENST00000560005 PAK3O75914 559 aaPredicted RBP29.98■■■□□ 2.39
PSEN1-225ENST00000560005 TRIM37O94972 964 aa29.96■■■□□ 2.39
PSEN1-225ENST00000560005 NGDNQ8NEJ9 315 aaKnown RBP29.96■■■□□ 2.39
PSEN1-225ENST00000560005 CAMKK2Q96RR4 588 aa29.96■■■□□ 2.39
PSEN1-225ENST00000560005 SPATA31A1Q5TZJ5 1347 aa29.95■■■□□ 2.38
PSEN1-225ENST00000560005 KIAA0232Q92628 1395 aa29.93■■■□□ 2.38
PSEN1-225ENST00000560005 WASLO00401 505 aaPredicted RBP29.93■■■□□ 2.38
PSEN1-225ENST00000560005 FAM196AQ6ZSG2 479 aa29.93■■■□□ 2.38
PSEN1-225ENST00000560005 CHRNA2Q15822 529 aa29.92■■■□□ 2.38
PSEN1-225ENST00000560005 STRN4Q9NRL3 753 aa29.91■■■□□ 2.38
PSEN1-225ENST00000560005 APBA3O96018 575 aa29.9■■■□□ 2.38
PSEN1-225ENST00000560005 PARD3Q8TEW0 1356 aa29.89■■■□□ 2.37
PSEN1-225ENST00000560005 USP35Q9P2H5 1018 aa29.86■■■□□ 2.37
PSEN1-225ENST00000560005 PHRF1Q9P1Y6 1649 aaKnown RBP29.85■■■□□ 2.37
PSEN1-225ENST00000560005 ZC3H6P61129 1189 aaKnown RBP29.85■■■□□ 2.37
PSEN1-225ENST00000560005 RREB1Q92766 1687 aa29.82■■■□□ 2.36
PSEN1-225ENST00000560005 ATP7BP35670 1465 aa29.82■■■□□ 2.36
PSEN1-225ENST00000560005 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
PSEN1-225ENST00000560005 KDM2AQ9Y2K7 1162 aa29.82■■■□□ 2.36
PSEN1-225ENST00000560005 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
PSEN1-225ENST00000560005 PDE3BQ13370 1112 aa29.81■■■□□ 2.36
PSEN1-225ENST00000560005 NUP188Q5SRE5 1749 aa29.8■■■□□ 2.36
PSEN1-225ENST00000560005 YY1P25490 414 aa29.8■■■□□ 2.36
PSEN1-225ENST00000560005 NUDT16Q96DE0 195 aaKnown RBP29.8■■■□□ 2.36
PSEN1-225ENST00000560005 SSH2Q76I76 1423 aa29.79■■■□□ 2.36
PSEN1-225ENST00000560005 EVA1CP58658 441 aa29.79■■■□□ 2.36
PSEN1-225ENST00000560005 BARGINQ6ZT62 677 aa29.79■■■□□ 2.36
PSEN1-225ENST00000560005 DCAF11Q8TEB1 546 aa29.78■■■□□ 2.36
PSEN1-225ENST00000560005 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
PSEN1-225ENST00000560005 NBPF14Q5TI25 921 aa29.77■■■□□ 2.36
PSEN1-225ENST00000560005 LARP1Q6PKG0 1096 aaKnown RBP29.75■■■□□ 2.35
PSEN1-225ENST00000560005 ARHGEF28Q8N1W1 1705 aaKnown RBP29.75■■■□□ 2.35
PSEN1-225ENST00000560005 CAMTA1Q9Y6Y1 1673 aa29.73■■■□□ 2.35
PSEN1-225ENST00000560005 TCP11L2Q8N4U5 519 aa29.72■■■□□ 2.35
PSEN1-225ENST00000560005 NRKQ7Z2Y5 1582 aa29.72■■■□□ 2.35
PSEN1-225ENST00000560005 ACEP12821 1306 aa29.71■■■□□ 2.35
PSEN1-225ENST00000560005 POLR3AO14802 1390 aaPredicted RBP29.7■■■□□ 2.35
PSEN1-225ENST00000560005 ZEB1P37275 1124 aaPredicted RBP29.7■■■□□ 2.35
PSEN1-225ENST00000560005 CDK19Q9BWU1 502 aa29.7■■■□□ 2.35
PSEN1-225ENST00000560005 PPP1R1BQ9UD71 204 aaPredicted RBP29.7■■■□□ 2.35
PSEN1-225ENST00000560005 SPON1Q9HCB6 807 aa29.69■■■□□ 2.34
PSEN1-225ENST00000560005 LMO7Q8WWI1 1683 aa29.68■■■□□ 2.34
PSEN1-225ENST00000560005 CPDO75976 1380 aa29.67■■■□□ 2.34
PSEN1-225ENST00000560005 RAB3GAP2Q9H2M9 1393 aa29.67■■■□□ 2.34
PSEN1-225ENST00000560005 TOPAZ1Q8N9V7 1692 aa29.67■■■□□ 2.34
PSEN1-225ENST00000560005 ABTB2Q8N961 1025 aa29.67■■■□□ 2.34
PSEN1-225ENST00000560005 KCNQ2O43526 872 aa29.65■■■□□ 2.34
PSEN1-225ENST00000560005 STAC3Q96MF2 364 aa29.65■■■□□ 2.34
PSEN1-225ENST00000560005 CCDC61Q9Y6R9 512 aa29.65■■■□□ 2.34
PSEN1-225ENST00000560005 CCER1Q8TC90 406 aaPredicted RBP29.64■■■□□ 2.34
PSEN1-225ENST00000560005 THRAP3Q9Y2W1 955 aaKnown RBP29.64■■■□□ 2.34
PSEN1-225ENST00000560005 USP19O94966 1318 aa29.63■■■□□ 2.33
PSEN1-225ENST00000560005 NINLQ9Y2I6 1382 aa29.63■■■□□ 2.33
PSEN1-225ENST00000560005 PARP4Q9UKK3 1724 aaKnown RBP29.62■■■□□ 2.33
PSEN1-225ENST00000560005 PLEKHG3A1L390 1219 aa29.62■■■□□ 2.33
PSEN1-225ENST00000560005 DCAF8L1A6NGE4 600 aa29.61■■■□□ 2.33
PSEN1-225ENST00000560005 COL5A2P05997 1499 aaPredicted RBP29.61■■■□□ 2.33
PSEN1-225ENST00000560005 GCP02774 474 aa29.58■■■□□ 2.33
PSEN1-225ENST00000560005 OVOS2A0A0G2JMS6 1433 aa29.57■■■□□ 2.32
PSEN1-225ENST00000560005 OVOS2A0A0J9YW53 1432 aa29.57■■■□□ 2.32
PSEN1-225ENST00000560005 OVOS2Q6IE36 1432 aa29.57■■■□□ 2.32
PSEN1-225ENST00000560005 NLRP13Q86W25 1043 aa29.57■■■□□ 2.32
PSEN1-225ENST00000560005 C11orf95C9JLR9 678 aaPredicted RBP29.56■■■□□ 2.32
PSEN1-225ENST00000560005 PEAK1Q9H792 1746 aa29.56■■■□□ 2.32
PSEN1-225ENST00000560005 CRB1P82279 1406 aa29.55■■■□□ 2.32
PSEN1-225ENST00000560005 ZBTB7CA1YPR0 619 aa29.53■■■□□ 2.32
PSEN1-225ENST00000560005 ANO8Q9HCE9 1232 aaPredicted RBP29.53■■■□□ 2.32
PSEN1-225ENST00000560005 RGPD3A6NKT7 1758 aaPredicted RBP29.53■■■□□ 2.32
PSEN1-225ENST00000560005 RGPD4Q7Z3J3 1758 aa29.53■■■□□ 2.32
PSEN1-225ENST00000560005 PLSCR1O15162 318 aa29.52■■■□□ 2.32
PSEN1-225ENST00000560005 LRRC37A3O60309 1634 aa29.51■■■□□ 2.31
PSEN1-225ENST00000560005 PPIP5K1Q6PFW1 1433 aa29.51■■■□□ 2.31
PSEN1-225ENST00000560005 SBF2Q86WG5 1849 aa29.5■■■□□ 2.31
PSEN1-225ENST00000560005 SRPK2P78362 688 aaKnown RBP29.49■■■□□ 2.31
PSEN1-225ENST00000560005 DDB1Q16531 1140 aa29.49■■■□□ 2.31
PSEN1-225ENST00000560005 PTF1AQ7RTS3 328 aa29.49■■■□□ 2.31
PSEN1-225ENST00000560005 CASZ1Q86V15 1759 aa29.49■■■□□ 2.31
PSEN1-225ENST00000560005 CLSPNQ9HAW4 1339 aa29.48■■■□□ 2.31
PSEN1-225ENST00000560005 UTRNP46939 3433 aa29.48■■■□□ 2.31
PSEN1-225ENST00000560005 PDGFDQ9GZP0 370 aaPredicted RBP29.48■■■□□ 2.31
PSEN1-225ENST00000560005 BCL11BQ9C0K0 894 aaPredicted RBP29.46■■■□□ 2.31
PSEN1-225ENST00000560005 AATKQ6ZMQ8 1374 aa29.46■■■□□ 2.31
PSEN1-225ENST00000560005 TOM1L2Q6ZVM7 507 aa29.45■■■□□ 2.31
PSEN1-225ENST00000560005 ZBTB7AO95365 584 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms