RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 C1orf167Q5SNV9 1468 aa7.79□□□□□ -1.16
CDK12-204ENST00000559545 RALGAPBQ86X10 1494 aa7.79□□□□□ -1.16
CDK12-204ENST00000559545 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
CDK12-204ENST00000559545 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
CDK12-204ENST00000559545 ROBO1Q9Y6N7 1651 aa7.78□□□□□ -1.16
CDK12-204ENST00000559545 PLEKHH1Q9ULM0 1364 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 ATF3P18847 181 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 NEUROD1Q13562 356 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 TMCO4Q5TGY1 634 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 BRINP3Q76B58 766 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 RGS22Q8NE09 1264 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 USP32Q8NFA0 1604 aa7.77□□□□□ -1.17
CDK12-204ENST00000559545 SOS2Q07890 1332 aaPredicted RBP7.77□□□□□ -1.17
CDK12-204ENST00000559545 TONSLQ96HA7 1378 aa7.76□□□□□ -1.17
CDK12-204ENST00000559545 WASLO00401 505 aaPredicted RBP7.76□□□□□ -1.17
CDK12-204ENST00000559545 AEBP1Q8IUX7 1158 aa7.76□□□□□ -1.17
CDK12-204ENST00000559545 PRAM1Q96QH2 718 aa7.76□□□□□ -1.17
CDK12-204ENST00000559545 ZBTB47Q9UFB7 747 aaPredicted RBP7.76□□□□□ -1.17
CDK12-204ENST00000559545 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
CDK12-204ENST00000559545 BRD4O60885 1362 aaPredicted RBP7.75□□□□□ -1.17
CDK12-204ENST00000559545 COL16A1Q07092 1604 aaPredicted RBP7.75□□□□□ -1.17
CDK12-204ENST00000559545 RBM25P49756 843 aaKnown RBP7.75□□□□□ -1.17
CDK12-204ENST00000559545 FLIIQ13045 1269 aa7.75□□□□□ -1.17
CDK12-204ENST00000559545 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
CDK12-204ENST00000559545 KIF1AQ12756 1690 aa7.75□□□□□ -1.17
CDK12-204ENST00000559545 EIF3AQ14152 1382 aaKnown RBP7.74□□□□□ -1.17
CDK12-204ENST00000559545 SHPRHQ149N8 1683 aa7.74□□□□□ -1.17
CDK12-204ENST00000559545 PLEKHG5O94827 1062 aa7.74□□□□□ -1.17
CDK12-204ENST00000559545 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
CDK12-204ENST00000559545 TESK2Q96S53 571 aa7.74□□□□□ -1.17
CDK12-204ENST00000559545 STK26Q9P289 416 aa7.74□□□□□ -1.17
CDK12-204ENST00000559545 ITSN1Q15811 1721 aa7.74□□□□□ -1.17
CDK12-204ENST00000559545 TOPAZ1Q8N9V7 1692 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 POLR3AO14802 1390 aaPredicted RBP7.73□□□□□ -1.17
CDK12-204ENST00000559545 PHLPP1O60346 1717 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 ZMYND10O75800 440 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 LRRC59Q96AG4 307 aaKnown RBP7.73□□□□□ -1.17
CDK12-204ENST00000559545 CCDC61Q9Y6R9 512 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 COL22A1Q8NFW1 1626 aaPredicted RBP7.73□□□□□ -1.17
CDK12-204ENST00000559545 CENPJQ9HC77 1338 aaPredicted RBP7.73□□□□□ -1.17
CDK12-204ENST00000559545 QRICH2Q9H0J4 1663 aa7.73□□□□□ -1.17
CDK12-204ENST00000559545 ROCK2O75116 1388 aaKnown RBP7.72□□□□□ -1.17
CDK12-204ENST00000559545 E9PSI1 815 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 STK25O00506 426 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 HSPA1LP34931 641 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 CCDC82Q8N4S0 544 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 ORAI2Q96SN7 254 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 CDK19Q9BWU1 502 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 POGKQ9P215 609 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 PXDNQ92626 1479 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 PRR36Q9H6K5 1346 aa7.72□□□□□ -1.17
CDK12-204ENST00000559545 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
CDK12-204ENST00000559545 SBNO1A3KN83 1393 aa7.71□□□□□ -1.17
CDK12-204ENST00000559545 SSH2Q76I76 1423 aa7.71□□□□□ -1.17
CDK12-204ENST00000559545 ATP7BP35670 1465 aa7.71□□□□□ -1.18
CDK12-204ENST00000559545 MKRN3Q13064 507 aaKnown RBP7.71□□□□□ -1.18
CDK12-204ENST00000559545 AK7Q96M32 723 aa7.71□□□□□ -1.18
CDK12-204ENST00000559545 CARD11Q9BXL7 1154 aa7.71□□□□□ -1.18
CDK12-204ENST00000559545 AKAP12Q02952 1782 aa7.71□□□□□ -1.18
CDK12-204ENST00000559545 ALS2Q96Q42 1657 aa7.7□□□□□ -1.18
CDK12-204ENST00000559545 RIOK3O14730 519 aaKnown RBP7.7□□□□□ -1.18
CDK12-204ENST00000559545 MFAP1P55081 439 aaKnown RBP7.7□□□□□ -1.18
CDK12-204ENST00000559545 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
CDK12-204ENST00000559545 NUDT16Q96DE0 195 aaKnown RBP7.7□□□□□ -1.18
CDK12-204ENST00000559545 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
CDK12-204ENST00000559545 SPATA31A6Q5VVP1 1343 aa7.7□□□□□ -1.18
CDK12-204ENST00000559545 NPHP3Q7Z494 1330 aa7.7□□□□□ -1.18
CDK12-204ENST00000559545 EVC2Q86UK5 1308 aa7.7□□□□□ -1.18
CDK12-204ENST00000559545 JCADQ9P266 1359 aa7.7□□□□□ -1.18
CDK12-204ENST00000559545 CPSF1Q10570 1443 aaKnown RBP7.69□□□□□ -1.18
CDK12-204ENST00000559545 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
CDK12-204ENST00000559545 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
CDK12-204ENST00000559545 CHMP4AQ9BY43 222 aa7.69□□□□□ -1.18
CDK12-204ENST00000559545 PHF8Q9UPP1 1060 aa7.69□□□□□ -1.18
CDK12-204ENST00000559545 SPATA31A3Q5VYP0 1347 aa7.69□□□□□ -1.18
CDK12-204ENST00000559545 MARF1Q9Y4F3 1742 aaKnown RBP7.69□□□□□ -1.18
CDK12-204ENST00000559545 USP54Q70EL1 1684 aa7.68□□□□□ -1.18
CDK12-204ENST00000559545 ST20-MTHFSA0A0A6YYL1 179 aa7.68□□□□□ -1.18
CDK12-204ENST00000559545 PIP4K2BP78356 416 aa7.68□□□□□ -1.18
CDK12-204ENST00000559545 GPBP1L1Q9HC44 474 aaPredicted RBP7.68□□□□□ -1.18
CDK12-204ENST00000559545 NINLQ9Y2I6 1382 aa7.68□□□□□ -1.18
CDK12-204ENST00000559545 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 FOXO3O43524 673 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 PSME1Q06323 249 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 GSE1Q14687 1217 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 BARGINQ6ZT62 677 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 RNF25Q96BH1 459 aaPredicted RBP7.67□□□□□ -1.18
CDK12-204ENST00000559545 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
CDK12-204ENST00000559545 KDM4CQ9H3R0 1056 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
CDK12-204ENST00000559545 ATAD2Q6PL18 1390 aa7.67□□□□□ -1.18
CDK12-204ENST00000559545 KRT28Q7Z3Y7 464 aa7.66□□□□□ -1.18
CDK12-204ENST00000559545 PNPLA6Q8IY17 1366 aa7.66□□□□□ -1.18
CDK12-204ENST00000559545 CD163L1Q9NR16 1453 aa7.66□□□□□ -1.18
CDK12-204ENST00000559545 MON2Q7Z3U7 1717 aa7.66□□□□□ -1.18
CDK12-204ENST00000559545 ACEP12821 1306 aa7.65□□□□□ -1.18
CDK12-204ENST00000559545 MED1Q15648 1581 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms