RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 MYT1Q01538 1121 aa24.3■■□□□ 1.48
PSEN1-224ENST00000559361 EN1Q05925 392 aaPredicted RBP24.3■■□□□ 1.48
PSEN1-224ENST00000559361 POGKQ9P215 609 aa24.29■■□□□ 1.48
PSEN1-224ENST00000559361 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
PSEN1-224ENST00000559361 THSD7AQ9UPZ6 1657 aa24.27■■□□□ 1.48
PSEN1-224ENST00000559361 CRYBG1Q9Y4K1 1723 aa24.27■■□□□ 1.48
PSEN1-224ENST00000559361 ADGRB1O14514 1584 aa24.26■■□□□ 1.47
PSEN1-224ENST00000559361 FAM182BQ5T319 152 aa24.26■■□□□ 1.47
PSEN1-224ENST00000559361 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
PSEN1-224ENST00000559361 GPRASP1Q5JY77 1395 aa24.26■■□□□ 1.47
PSEN1-224ENST00000559361 TNS1Q9HBL0 1735 aaKnown RBP24.25■■□□□ 1.47
PSEN1-224ENST00000559361 TULP4Q9NRJ4 1543 aa24.22■■□□□ 1.47
PSEN1-224ENST00000559361 R3HDM1Q15032 1099 aaKnown RBP24.22■■□□□ 1.47
PSEN1-224ENST00000559361 HIRIP3Q9BW71 556 aaPredicted RBP24.22■■□□□ 1.47
PSEN1-224ENST00000559361 EIF3AQ14152 1382 aaKnown RBP24.21■■□□□ 1.47
PSEN1-224ENST00000559361 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-224ENST00000559361 CAMKK2Q96RR4 588 aa24.2■■□□□ 1.46
PSEN1-224ENST00000559361 TRAK1Q9UPV9 953 aa24.2■■□□□ 1.46
PSEN1-224ENST00000559361 SPATA31A1Q5TZJ5 1347 aa24.19■■□□□ 1.46
PSEN1-224ENST00000559361 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
PSEN1-224ENST00000559361 MINK1Q8N4C8 1332 aaPredicted RBP24.18■■□□□ 1.46
PSEN1-224ENST00000559361 PRDM11Q9NQV5 511 aa24.18■■□□□ 1.46
PSEN1-224ENST00000559361 FAM196AQ6ZSG2 479 aa24.16■■□□□ 1.46
PSEN1-224ENST00000559361 NGDNQ8NEJ9 315 aaKnown RBP24.16■■□□□ 1.46
PSEN1-224ENST00000559361 KIAA0232Q92628 1395 aa24.14■■□□□ 1.45
PSEN1-224ENST00000559361 PAK3O75914 559 aaPredicted RBP24.13■■□□□ 1.45
PSEN1-224ENST00000559361 TRIM37O94972 964 aa24.13■■□□□ 1.45
PSEN1-224ENST00000559361 STAC3Q96MF2 364 aa24.13■■□□□ 1.45
PSEN1-224ENST00000559361 PARD3Q8TEW0 1356 aa24.13■■□□□ 1.45
PSEN1-224ENST00000559361 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
PSEN1-224ENST00000559361 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
PSEN1-224ENST00000559361 CHRNA2Q15822 529 aa24.1■■□□□ 1.45
PSEN1-224ENST00000559361 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
PSEN1-224ENST00000559361 ATP7BP35670 1465 aa24.1■■□□□ 1.45
PSEN1-224ENST00000559361 ITSN1Q15811 1721 aa24.1■■□□□ 1.45
PSEN1-224ENST00000559361 APBA3O96018 575 aa24.09■■□□□ 1.45
PSEN1-224ENST00000559361 BARGINQ6ZT62 677 aa24.09■■□□□ 1.45
PSEN1-224ENST00000559361 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.45
PSEN1-224ENST00000559361 RREB1Q92766 1687 aa24.08■■□□□ 1.44
PSEN1-224ENST00000559361 NEUROD1Q13562 356 aa24.07■■□□□ 1.44
PSEN1-224ENST00000559361 STRN4Q9NRL3 753 aa24.07■■□□□ 1.44
PSEN1-224ENST00000559361 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
PSEN1-224ENST00000559361 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
PSEN1-224ENST00000559361 ARHGEF28Q8N1W1 1705 aaKnown RBP24.05■■□□□ 1.44
PSEN1-224ENST00000559361 DCAF11Q8TEB1 546 aa24.05■■□□□ 1.44
PSEN1-224ENST00000559361 KDM2AQ9Y2K7 1162 aa24.05■■□□□ 1.44
PSEN1-224ENST00000559361 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
PSEN1-224ENST00000559361 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
PSEN1-224ENST00000559361 NUP188Q5SRE5 1749 aa24.04■■□□□ 1.44
PSEN1-224ENST00000559361 CAMTA1Q9Y6Y1 1673 aa24.02■■□□□ 1.44
PSEN1-224ENST00000559361 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
PSEN1-224ENST00000559361 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
PSEN1-224ENST00000559361 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
PSEN1-224ENST00000559361 CPDO75976 1380 aa24.01■■□□□ 1.43
PSEN1-224ENST00000559361 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
PSEN1-224ENST00000559361 EVA1CP58658 441 aa24■■□□□ 1.43
PSEN1-224ENST00000559361 NUTM2GQ5VZR2 741 aa24■■□□□ 1.43
PSEN1-224ENST00000559361 CDK19Q9BWU1 502 aa24■■□□□ 1.43
PSEN1-224ENST00000559361 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
PSEN1-224ENST00000559361 PLEKHG3A1L390 1219 aa23.99■■□□□ 1.43
PSEN1-224ENST00000559361 LARP1Q6PKG0 1096 aaKnown RBP23.99■■□□□ 1.43
PSEN1-224ENST00000559361 TCP11L2Q8N4U5 519 aa23.99■■□□□ 1.43
PSEN1-224ENST00000559361 ACEP12821 1306 aa23.99■■□□□ 1.43
PSEN1-224ENST00000559361 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
PSEN1-224ENST00000559361 NBPF14Q5TI25 921 aa23.98■■□□□ 1.43
PSEN1-224ENST00000559361 CCDC61Q9Y6R9 512 aa23.98■■□□□ 1.43
PSEN1-224ENST00000559361 USP19O94966 1318 aa23.97■■□□□ 1.43
PSEN1-224ENST00000559361 L3MBTL2Q969R5 705 aa23.97■■□□□ 1.43
PSEN1-224ENST00000559361 THRAP3Q9Y2W1 955 aaKnown RBP23.97■■□□□ 1.43
PSEN1-224ENST00000559361 YY1P25490 414 aa23.95■■□□□ 1.42
PSEN1-224ENST00000559361 PARP4Q9UKK3 1724 aaKnown RBP23.95■■□□□ 1.42
PSEN1-224ENST00000559361 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
PSEN1-224ENST00000559361 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
PSEN1-224ENST00000559361 SPON1Q9HCB6 807 aa23.92■■□□□ 1.42
PSEN1-224ENST00000559361 KCNQ2O43526 872 aa23.91■■□□□ 1.42
PSEN1-224ENST00000559361 GCP02774 474 aa23.91■■□□□ 1.42
PSEN1-224ENST00000559361 PEAK1Q9H792 1746 aa23.9■■□□□ 1.42
PSEN1-224ENST00000559361 SBF2Q86WG5 1849 aa23.89■■□□□ 1.42
PSEN1-224ENST00000559361 COL5A2P05997 1499 aaPredicted RBP23.89■■□□□ 1.42
PSEN1-224ENST00000559361 NLRP13Q86W25 1043 aa23.89■■□□□ 1.41
PSEN1-224ENST00000559361 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.41
PSEN1-224ENST00000559361 RGPD3A6NKT7 1758 aaPredicted RBP23.88■■□□□ 1.41
PSEN1-224ENST00000559361 RGPD4Q7Z3J3 1758 aa23.88■■□□□ 1.41
PSEN1-224ENST00000559361 PLSCR1O15162 318 aa23.87■■□□□ 1.41
PSEN1-224ENST00000559361 CRB1P82279 1406 aa23.86■■□□□ 1.41
PSEN1-224ENST00000559361 KIAA1210Q9ULL0 1709 aa23.86■■□□□ 1.41
PSEN1-224ENST00000559361 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
PSEN1-224ENST00000559361 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
PSEN1-224ENST00000559361 BRD4O60885 1362 aaPredicted RBP23.85■■□□□ 1.41
PSEN1-224ENST00000559361 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
PSEN1-224ENST00000559361 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
PSEN1-224ENST00000559361 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
PSEN1-224ENST00000559361 AATKQ6ZMQ8 1374 aa23.81■■□□□ 1.4
PSEN1-224ENST00000559361 CASZ1Q86V15 1759 aa23.81■■□□□ 1.4
PSEN1-224ENST00000559361 PPIP5K1Q6PFW1 1433 aa23.81■■□□□ 1.4
PSEN1-224ENST00000559361 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
PSEN1-224ENST00000559361 COL18A1P39060 1754 aa23.8■■□□□ 1.4
PSEN1-224ENST00000559361 LRRC37A3O60309 1634 aa23.8■■□□□ 1.4
PSEN1-224ENST00000559361 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
PSEN1-224ENST00000559361 PROM2Q8N271 834 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms