RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FBXO45P0C2W1 286 aa20.26■□□□□ 0.83
CASC4-208ENST00000559151 CCNYL3P0C7X3 344 aa20.24■□□□□ 0.83
CASC4-208ENST00000559151 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
CASC4-208ENST00000559151 PALM3A6NDB9 673 aaPredicted RBP20.23■□□□□ 0.83
CASC4-208ENST00000559151 MMP16P51512 607 aa20.23■□□□□ 0.83
CASC4-208ENST00000559151 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
CASC4-208ENST00000559151 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.22■□□□□ 0.83
CASC4-208ENST00000559151 ZBBXA8MT70 800 aa20.22■□□□□ 0.83
CASC4-208ENST00000559151 PBXIP1Q96AQ6 731 aa20.22■□□□□ 0.83
CASC4-208ENST00000559151 POTEMA6NI47 508 aa20.21■□□□□ 0.83
CASC4-208ENST00000559151 NYAP1Q6ZVC0 841 aa20.2■□□□□ 0.82
CASC4-208ENST00000559151 TRAIPQ9BWF2 469 aa20.2■□□□□ 0.82
CASC4-208ENST00000559151 EVA1BQ9NVM1 165 aa20.2■□□□□ 0.82
CASC4-208ENST00000559151 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
CASC4-208ENST00000559151 ZPR1O75312 459 aa20.19■□□□□ 0.82
CASC4-208ENST00000559151 MTRQ99707 1265 aa20.19■□□□□ 0.82
CASC4-208ENST00000559151 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
CASC4-208ENST00000559151 ADH1BP00325 375 aa20.18■□□□□ 0.82
CASC4-208ENST00000559151 KCNH2Q12809 1159 aa20.18■□□□□ 0.82
CASC4-208ENST00000559151 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
CASC4-208ENST00000559151 PTPN5P54829 565 aa20.16■□□□□ 0.82
CASC4-208ENST00000559151 ACIN1Q9UKV3 1341 aaKnown RBP20.16■□□□□ 0.82
CASC4-208ENST00000559151 SRPK2P78362 688 aaKnown RBP20.14■□□□□ 0.81
CASC4-208ENST00000559151 TBC1D9Q6ZT07 1266 aa20.13■□□□□ 0.81
CASC4-208ENST00000559151 ZNF516Q92618 1163 aa20.11■□□□□ 0.81
CASC4-208ENST00000559151 ARMC2Q8NEN0 867 aa20.1■□□□□ 0.81
CASC4-208ENST00000559151 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
CASC4-208ENST00000559151 TJAP1Q5JTD0 557 aa20.09■□□□□ 0.81
CASC4-208ENST00000559151 CCDC24Q8N4L8 307 aa20.08■□□□□ 0.81
CASC4-208ENST00000559151 IL21Q9HBE4 155 aa20.08■□□□□ 0.81
CASC4-208ENST00000559151 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
CASC4-208ENST00000559151 PIK3CDO00329 1044 aa20.06■□□□□ 0.8
CASC4-208ENST00000559151 PTK2Q05397 1052 aa20.06■□□□□ 0.8
CASC4-208ENST00000559151 GPKOWQ92917 476 aaPredicted RBP eCLIP20.06■□□□□ 0.8
CASC4-208ENST00000559151 OCSTAMPQ9BR26 566 aa20.06■□□□□ 0.8
CASC4-208ENST00000559151 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 ATP9BO43861 1147 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 CDAN1Q8IWY9 1227 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 SLC6A16Q9GZN6 736 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 UNC93B1Q9H1C4 597 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 GPSM3Q9Y4H4 160 aa20.05■□□□□ 0.8
CASC4-208ENST00000559151 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
CASC4-208ENST00000559151 PTCRAQ6ISU1 281 aaPredicted RBP20.04■□□□□ 0.8
CASC4-208ENST00000559151 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
CASC4-208ENST00000559151 POTEGQ6S5H5 508 aa19.98■□□□□ 0.79
CASC4-208ENST00000559151 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
CASC4-208ENST00000559151 ARHGAP9Q9BRR9 750 aa19.98■□□□□ 0.79
CASC4-208ENST00000559151 PCDHB9Q9Y5E1 797 aa19.98■□□□□ 0.79
CASC4-208ENST00000559151 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
CASC4-208ENST00000559151 KCTD17Q8N5Z5 321 aa19.97■□□□□ 0.79
CASC4-208ENST00000559151 NKX2-3Q8TAU0 364 aa19.97■□□□□ 0.79
CASC4-208ENST00000559151 FAM174AQ8TBP5 190 aa19.96■□□□□ 0.79
CASC4-208ENST00000559151 S1PR4O95977 384 aa19.95■□□□□ 0.78
CASC4-208ENST00000559151 SKIP12755 728 aa19.95■□□□□ 0.78
CASC4-208ENST00000559151 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
CASC4-208ENST00000559151 ADAM32Q8TC27 787 aa19.95■□□□□ 0.78
CASC4-208ENST00000559151 PDE4CQ08493 712 aa19.94■□□□□ 0.78
CASC4-208ENST00000559151 CEP126Q9P2H0 1117 aa19.94■□□□□ 0.78
CASC4-208ENST00000559151 SH3BP5LQ7L8J4 393 aa19.93■□□□□ 0.78
CASC4-208ENST00000559151 USTQ9Y2C2 406 aa19.93■□□□□ 0.78
CASC4-208ENST00000559151 CARNS1A5YM72 827 aa19.91■□□□□ 0.78
CASC4-208ENST00000559151 ATG7O95352 703 aa19.91■□□□□ 0.78
CASC4-208ENST00000559151 FCF1Q9Y324 198 aaKnown RBP19.91■□□□□ 0.78
CASC4-208ENST00000559151 USP17L3A6NCW0 530 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 USP17L4A6NCW7 530 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 USP17L5A8MUK1 530 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
CASC4-208ENST00000559151 USP17L2Q6R6M4 530 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 USP17L1Q7RTZ2 530 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 ZBTB33Q86T24 672 aa19.9■□□□□ 0.78
CASC4-208ENST00000559151 ZNF592Q92610 1267 aa19.89■□□□□ 0.77
CASC4-208ENST00000559151 VRTNQ9H8Y1 702 aa19.89■□□□□ 0.77
CASC4-208ENST00000559151 MCCD1P59942 119 aaPredicted RBP19.88■□□□□ 0.77
CASC4-208ENST00000559151 SLFNL1Q499Z3 407 aa19.88■□□□□ 0.77
CASC4-208ENST00000559151 DEPDC4Q8N2C3 294 aa19.88■□□□□ 0.77
CASC4-208ENST00000559151 BAP1Q92560 729 aa19.88■□□□□ 0.77
CASC4-208ENST00000559151 CARD14Q9BXL6 1004 aa19.88■□□□□ 0.77
CASC4-208ENST00000559151 LINC01559Q495D7 138 aa19.87■□□□□ 0.77
CASC4-208ENST00000559151 RNF135Q8IUD6 432 aa19.86■□□□□ 0.77
CASC4-208ENST00000559151 MAGEB6P1A0A0J9YX57 407 aa19.85■□□□□ 0.77
CASC4-208ENST00000559151 SH3RF1Q7Z6J0 888 aa19.85■□□□□ 0.77
CASC4-208ENST00000559151 PLEKHM2Q8IWE5 1019 aa19.85■□□□□ 0.77
CASC4-208ENST00000559151 PHTF2Q8N3S3 785 aa19.85■□□□□ 0.77
CASC4-208ENST00000559151 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
CASC4-208ENST00000559151 FOXJ1Q92949 421 aa19.82■□□□□ 0.76
CASC4-208ENST00000559151 ZNF511Q8NB15 262 aa19.81■□□□□ 0.76
CASC4-208ENST00000559151 AGERQ15109 404 aa19.8■□□□□ 0.76
CASC4-208ENST00000559151 PLPP7Q8NBV4 271 aa19.8■□□□□ 0.76
CASC4-208ENST00000559151 TMEM88BA6NKF7 163 aa19.79■□□□□ 0.76
CASC4-208ENST00000559151 NCOA4Q13772 614 aa19.79■□□□□ 0.76
CASC4-208ENST00000559151 C4orf48Q5BLP8 95 aa19.79■□□□□ 0.76
CASC4-208ENST00000559151 BPHLQ86WA6 291 aaPredicted RBP19.79■□□□□ 0.76
CASC4-208ENST00000559151 PPEF1O14829 653 aaPredicted RBP19.78■□□□□ 0.76
CASC4-208ENST00000559151 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
CASC4-208ENST00000559151 MKRN1Q9UHC7 482 aaKnown RBP19.77■□□□□ 0.76
CASC4-208ENST00000559151 ZMIZ1Q9ULJ6 1067 aa19.76■□□□□ 0.75
CASC4-208ENST00000559151 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
CASC4-208ENST00000559151 ELOAQ14241 798 aaKnown RBP19.74■□□□□ 0.75
CASC4-208ENST00000559151 TSGA10IPQ3SY00 556 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms